Rissa tridactyla (black-legged kittiwake): 128916077
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Entry
128916077 CDS
T09443
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128916077
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Protocadherins
128916077
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128916077
NCBI-ProteinID:
XP_054073272
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Position
11:complement(20815951..20818738)
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AA seq
813 aa
AA seq
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MAIARQVLCLCAFLSLPLARSEPIRYSVAEEAASGSVVANVAEDAGLSPAQLAARGARLA
SEDGRQHFRLDPATGRLVVAERLDREELCGQSATCTLPFELLLANPLQFFRVEVAVEDIN
DHSPIFPEERVTITILERSDLGSRFPLEGARDLDVGSNSIQAYSISPENEYFSVSSGSRV
KGKKYVELVLEKALDREEEAELVFSLIAVDGGSPPRSGTTQIHIVVLDVNDNAPIFTQEL
YVGQILENAPEGSVLLKVVATDQDVGVNGDITYQFSEGVGQSNSAFTIDPTSGDIKVTKP
LDFEVAENHELSVRATDGGGLSAICKVLVEVVDVNDNAPELVVNSFNSPIPENAFPGTVV
ALFTVRDRDSGANGKISCALEDQLLFSLRLAYKNYYELVTVNALDREESAQHILVFTAAD
AGSPPLTTTQTFTVDISDVNDNAPAFNQTSYTMYVHENNVPMVLVGAVSAADADVGTNAK
VSYFLAPSHPTEQPPCSCISVNSENGHVFVLRPLDYEQVKQIDVLVSACDAGSPPLSANV
TVHLVVVDENDNAPLVLYPSQDSGPPSSELVPVSAEAGYLITKVVAVDADSGQNSWLSYH
LLKATEPGLFVVGAQSGEVRLKRPVTERDAVKQKLVVVVRDNGKPPLSATAALNALLLND
FSDVRLPHSSLATEDESDSLTTYLIISLTFVSLLFLASMTAFITRKVCKRKELKAGHVLY
GAGNLQSSLADAATAGTLPHGYCYEISLTTGSGNSEFKFLKPILPSLPPQQCTRGGGTHD
EQDFPRGPITAEHFAPDNRGTLSAEQFNSLSFN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctgtgctttcctctccctgccgctcgctcgc
tccgagcccatccgctactccgtagccgaggaggcggcgagcggctccgtggtagccaac
gtggcggaggacgcggggctgtccccggcgcagctggcggctcgcggcgcccgcctggcc
tcggaggacggccggcagcactttcgcttagaccccgccaccggccggctcgtcgtggcc
gagaggctggaccgggaggagctgtgcggccagtccgctacgtgcacgctccccttcgag
ctcctgctggcaaacccgctgcagttctttcgggtggaggtggccgtggaggacatcaat
gaccattcccccattttcccggaggaacgagttactattacgatcctggaaaggagcgac
ctgggctcgcgtttccctctggagggtgctcgggacctggatgttggcagcaacagcatc
caggcttacagcatttctcccgagaacgagtactttagcgtctcttctgggagtcgggtt
aaaggcaagaagtacgtggaactggtcttggagaaggctctagacagagaggaggaggca
gagttggttttcagtctcattgccgtggacggaggctctcctcccaggagtgggaccaca
caaatccacattgttgttctagatgtaaatgacaatgctcccatcttcacacaggagctg
tacgttgggcagattttggaaaatgcgccagagggctctgtgttacttaaagtggtggca
actgatcaggatgtgggagttaatggggacatcacctatcagttcagtgaaggggtgggc
cagagcaactcagcattcacaattgatcctactagtggtgatattaaagtcacgaagcct
ctggactttgaggtggcagagaatcatgagctcagtgtgcgggccacggatggcggtggc
ctgtcagctatctgcaaggtgttggtggaggtggtggacgtgaacgacaatgcacctgag
ctagtggtgaattccttcaacagccccatccccgagaacgcattccctggaacagtggtt
gccctctttactgtcagggaccgggattctggtgcgaatgggaagatctcctgtgccctt
gaggatcagctattgttctccctgcgtctggcctataagaactactatgagcttgtcacc
gtcaatgctctggacagggaggagtcggcacagcacatcctcgttttcactgcagcagac
gcggggtcacctcctctcacaaccacccagaccttcacggtggacatctctgatgtcaac
gacaatgcacctgccttcaaccagacatcatacacgatgtatgtgcatgagaacaatgtc
cccatggtgcttgttggagctgtcagtgctgcagatgctgatgtggggaccaatgccaag
gtgtcatatttcctggcaccatcccatcccacagagcagcctccctgctcctgcatctcc
gtgaactctgagaatgggcacgtgtttgtgctgcggcctctggactatgagcaggtgaag
cagattgatgtcttggtgagtgcctgtgatgcgggatctcctcctctcagtgccaacgtc
actgtccaccttgttgtggtggatgagaatgacaatgcgcctctggtgctgtacccatca
caggacagcggtccaccatccagcgagctggtgcctgtatcagctgaggcagggtacctc
atcaccaaagtggtggctgtggatgcagactcgggacagaactcgtggctctcataccac
ttgctgaaggccaccgagcccgggctgtttgtggttggtgcccaaagcggtgaggtgcgg
ctgaagaggccagtgacagagagggatgctgtgaagcagaagctagttgttgtggtgcga
gacaatgggaagccaccattgtcagccactgctgcactgaacgcactcctgctcaatgac
ttctcagacgtgcgcctacctcacagcagcctggccacggaggacgagagtgactccctg
acaacctatttaatcatttccttgacctttgtctcactcctcttcctcgcatccatgaca
gccttcatcactcgcaaggtgtgcaagagaaaggagctgaaggcagggcacgtgctctat
ggtgctggcaacttgcagagcagcctggctgatgcggccacagcagggaccttgccccat
ggctattgctatgagatcagcctcacaacgggctctggcaacagcgagttcaagttcctg
aagcccatcctccccagcctgccaccacagcagtgcaccagaggtgggggcacccacgat
gaacaggatttcccccgtggccccattactgcagaacactttgcaccagacaatcgtggg
accctctctgcagaacagttcaatagtctttcctttaactag
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