Rissa tridactyla (black-legged kittiwake): 128916081
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Entry
128916081 CDS
T09443
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128916081
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Protocadherins
128916081
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128916081
NCBI-ProteinID:
XP_054073286
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Position
11:complement(20825087..20828897)
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AA seq
813 aa
AA seq
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MAIARQVLCLCAFLSLPLARSEPIRYSVAEEAASGSVVANVAEDARLSPAQLAARGARLA
SEDGRQHFRLDPATGRLVVAERLDREELCGQSATCTLPFELLLANPLQFFRVEVAVEDIN
DHSPVFPVERVVFKIPERSDLGSRFPLEGARDLDVGSNSIQAYSISPENEYFSVFFASQR
EENKYVELVLEKALDREEEAEVVFSLIAMDGGSPPRSGTTQIHIVILDVNDNSPVFTQKL
YVGLVLENAPEGSVVLRVVATDQDVGVNGDITYEFSEAVGQSRSLFVIDPTSGEIKLTKP
LDFEVAENHELSVRATDGGGLSAICKVLVEVVDVNDNAPELVVNSFNSPLPENAFPGTVV
ALFTVRDRDSGANGKISCALEDQLLFSLRLAYKNYYELVTVNALDREESAQHILVFTAAD
AGSPPLTTTQTFTVDISDVNDNAPAFNQTSYTMYVHENNVPMVLVGAVSAADADVGPNAK
VSYFLAPSHRTEQPPCSCISVNSENGHVFVLRPLDYEQVKQIDVLVSACDAGSPPLSANV
TVHLVVVDENDNAPLVLYPSQDSGPPSSELVPVSAEAGYLITKVVAVDADSGQNSWLSYH
LLKATEPGLFVVGAQSGEVRLKRPVTEKDAVKQKLVIVVRDNGQPPLSATAALNALLLND
FSDVHLPHSSLATEDESDSLTTYLIISLTFVSLLFLASMTAFITRKVCKRKELKAGHVLY
GAGNLQSSLADAATTGTLPHGYCYEISLTTGSGNSEFKFLKPILPSLPPQQCTTVGGTHD
EQDFPRGPITAEDMAPDNRGTLSAEQFNSLSFN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctgtgctttcctctccctgccgctcgctcgc
tccgagcccatccgctactccgtagccgaggaggcggcgagcggctccgtggtagccaac
gtggcggaggacgcgaggctgtccccggcgcagctggcggctcgcggcgcccgcctggcc
tcggaggacggccggcagcactttcgcttagaccccgccaccggccggctcgtcgtggcc
gagaggctggaccgggaggagctgtgcggccagtccgctacgtgcacgctccccttcgag
ctcctgctggcaaacccgctgcagttctttcgggtggaggtggccgtggaggacatcaat
gaccattcccccgttttcccagtggaacgagtagtttttaagatcccggaaaggagcgac
ctgggctcgcgtttccctctggagggtgctcgggacctggatgttggcagcaacagcatc
caggcttacagcatttctcccgagaacgagtactttagtgtcttctttgcaagtcagagg
gaggagaacaaatatgttgaactggtcttggagaaggctctagacagagaggaggaggca
gaggtggttttcagtctcattgccatggacggaggctctcctcccaggagtgggaccaca
caaatccacattgttattctagatgtaaatgacaactctcctgtcttcacacagaagctg
tatgttgggctggttttggaaaatgcaccagagggctctgttgttctcagagtggtggca
actgatcaggacgtgggagttaatggggacatcacgtatgagttcagtgaagcagtgggc
cagagtaggtcattatttgtgattgaccccacgagtggtgaaattaaactcacaaagcct
ctggactttgaggtggcagagaatcatgagctcagtgtgcgggccacggatggcggtggc
ctgtcagcaatctgcaaggtgttggtggaggtggtggatgtgaacgacaatgcacctgag
ctggtggtcaactccttcaacagccccctccccgagaacgcattccctggaacagtggtt
gctctctttactgtcagggaccgggattctggtgcgaatgggaagatctcctgtgccctt
gaggatcagctattgttctccctgcgtctggcctataagaactactatgagcttgtcacc
gtcaatgctctggacagggaggagtcggcacagcacatcctcgttttcactgcagcagac
gcggggtcacctcctctcacaaccacccagacctttacggtggacatctccgatgtcaac
gacaatgcacctgccttcaaccagacatcatacacgatgtatgtgcatgagaacaatgtc
cccatggtgcttgttggagctgtcagtgctgcagatgctgatgtggggcccaacgccaag
gtgtcatatttcctggcaccgtcccatcgcacagagcagcctccctgctcctgcatctcc
gtgaactctgagaatgggcacgtgtttgtgctgcggcctctggactatgagcaggtgaag
cagattgatgtgctggtgagtgcctgtgatgcgggatctcctcctctcagtgccaacgtc
actgtccaccttgttgtggtggatgagaatgacaatgcacctctggtgctgtacccatca
caggacagcggtccaccatccagcgagctggtgcctgtatcagctgaggcagggtacctc
atcaccaaagtggtggctgtggatgcagactcgggacagaactcgtggctctcataccac
ctgctgaaggccaccgagcccgggctgtttgtggtgggtgcccaaagcggtgaggtgcgg
ctgaagaggccagtgacagagaaggacgctgtgaagcagaagcttgttattgtggtgcga
gacaatgggcagccaccattgtcagccactgctgcactgaatgccctcctgctcaatgac
ttctcagacgtgcacctaccgcacagcagcctggccacggaggacgagagtgactccctg
acaacctatttaatcatttcgttgacctttgtctcactcctcttcctcgcatccatgaca
gccttcatcactcgcaaggtgtgcaagagaaaggagctgaaggcagggcacgtgctctat
ggtgctggcaacttgcagagcagcctggctgatgcggccacaacagggaccttgccccat
ggctattgctatgagatcagcctcacaacaggctctggcaacagcgagttcaagttcctg
aagcccatcctccccagcctgccaccacagcagtgcaccacggttgggggcacccacgat
gaacaggatttcccccgtggccccattactgcagaggacatggcaccagacaatcgtggg
accctctctgcagaacagttcaatagtctttcctttaactag
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