Rissa tridactyla (black-legged kittiwake): 128916085
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Entry
128916085 CDS
T09443
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128916085
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Protocadherins
128916085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
PhyR_sigma2
Motif
Other DBs
NCBI-GeneID:
128916085
NCBI-ProteinID:
XP_054073292
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All DBs
Position
11:complement(20774700..20777834)
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AA seq
813 aa
AA seq
DB search
MAIARQVLCLCAFLSLPLARSEPIRYSVAEEAASGSVVANVAEDAGLSPAQLAARGARLA
SEDGRQHFRLDPATGRLVVAERLDREELCGQSATCTLPFELLLANPLQFFRVEVAVEDIN
DHSPIFPEERVTIKIPETSNPGSRFPLEGAWDLDVGSNSIQAYSISPGNEYFSVSSGSRS
KGDKYVELVLEKAVDREEEGEVVFSLIAMDGGSPPRSGTTQIHIVILDANDNAPVFTEEG
YIAQVLENAAVGSVVLRVTAIDRDEGVNGDITYQFRQAVGQSNSAFTIDPTSGEIKLTKP
LDFEVAENHELSVRATDGGGLSAICKVLMEVVDVNDNAPELVVNSFNSPLPENAFPGTVV
ALFTVRDQDSGANGKISCALEDQLLFSLRLAYKNYYELVTVNALDREESARHILIVTAAD
AGSPPLTTTQTFTVDISDVNDNAPAFNQTSYTMYVHENNVPMVLVGAVSAADADVGPNAK
VTYFLAPSHPTEQPPCSCISVNSENGHVFVLRPLDYEQVKQIDVLVSASDAGSPPLSANV
TVHLVVVDENDNAPLVLYPSQDSGPPSSELVPVSAEAGYLITKVVAVDADSGQNSWLSYH
LLKATEPGLFVVGAQSGEVRLKRPVTERDAVKQKLVVVVRDSGKPPLSATASLSALLLND
FSDVRLPHSSLATEDESDSLTTYLIISLTFVSLLFLASMTAFITRKVCKRKELKAGHVLY
GAGNLQSSLADAATAGTLPHAYCYEISLTTGSGNSEFKFLKPILPSLPPQQCTTVGGTHD
EQDVPRGPITAEDMAPENPETLSGEQFNSLSFN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctgtgctttcctctccctgccgctcgctcgc
tccgagcccatccgctactccgtagccgaggaggcggcgagcggctccgtggtagccaac
gtggcggaggacgcggggctgtccccggcgcagctggcagctcgcggcgcccgcctggcc
tcggaggacggccggcagcactttcgcttagaccccgccaccggccggctcgtcgtggcc
gagaggctggaccgggaggagctgtgcggccagtccgctacgtgcacgctccccttcgag
ctcctgctggcaaacccgctgcagttctttcgggtggaggtggccgtggaggacatcaat
gaccattcccccattttcccggaggaacgcgttactattaagatcccggaaacgagcaac
cctggctcgcgtttccctctggagggtgcttgggacctggatgttggcagcaacagcatc
caggcttacagcatttctcccgggaacgagtactttagcgtctcttctgggagtcggagt
aagggtgacaaatatgtcgaactggtcttggagaaggctgtagacagagaggaggaagga
gaggtggttttcagtctcattgccatggatgggggctctcctcccaggagtgggaccaca
caaatccacattgttattttagatgcaaatgacaacgctcctgtcttcacagaggaagga
tacattgcgcaggttttggaaaatgcggctgttggctcagtggtccttagagtgacagct
attgatcgggatgagggagttaatggggacatcacctatcagttcaggcaagcagtggga
cagagcaactcagcattcacaattgatcctactagtggtgaaattaaactcacgaagcct
ctggactttgaggtggcagagaatcatgagctcagtgtgcgggccacagatggcggtggc
ctgtcagctatctgcaaggtgttgatggaggtggtggacgtgaatgacaatgcacctgag
ctggtggtcaactccttcaacagccccctccccgagaacgcattccctggaacagtggtt
gccctctttactgtcagggaccaggattctggtgcgaatgggaagatctcctgtgccctt
gaggaccagctattgttctccctgcgtctggcctataagaactactatgagcttgtcacc
gtcaatgctctggacagggaggagtcggcacggcacatcctcattgtcacagcagcagac
gcggggtcacctcctctcacaaccacccagaccttcacggtggacatctctgatgtcaac
gacaatgcacctgccttcaaccagacatcatacacgatgtatgtgcatgagaacaatgtc
cccatggtgcttgttggagctgtcagtgctgcagatgctgatgtggggcccaatgccaag
gtgacatatttcctggcaccatcccatcccacagagcagcctccctgctcctgcatctcc
gtgaactctgagaatgggcacgtgtttgtgctgcggcctctggactatgagcaggtgaag
cagattgatgtgctggtgagtgcctccgatgccggatctcctcctctcagtgccaacgtc
accgtccaccttgttgtggtggatgagaatgacaatgcgcctctggtgctgtacccatca
caggacagcggtccaccatccagcgagctggtgcctgtatcagctgaggcagggtacctc
atcaccaaagtggtggctgtggatgcagactcgggacagaactcgtggctctcataccac
ctgctgaaggccaccgagcccgggctgtttgtggtgggtgcccaaagcggtgaggtgcgg
ctgaagaggccagtgacagagagggatgctgtgaagcagaagctagttgttgtggtgcga
gacagtgggaagccgccattgtcagccactgcgtcactgagtgcactcctgctcaatgac
ttctcagacgtgcgcctaccgcacagcagcctggccacggaggatgagagtgactccctg
acaacctatttaatcatttccttgacctttgtctcactcctcttcctcgcatccatgaca
gccttcatcactcgcaaggtgtgcaagagaaaggagctgaaggcagggcacgtgctttat
ggtgctggcaacttgcagagcagcctggctgatgcagccacagcagggaccttgccccat
gcctattgctatgagatcagcctcacaacgggctctggcaacagcgagttcaagttcctg
aagcccatcctccccagcctgccaccacagcagtgcaccacggttgggggcacccacgat
gaacaggatgtcccccgtggccccattactgcagaggacatggcaccagagaaccctgag
accctctctggagaacagttcaatagtctttcctttaactag
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