Rissa tridactyla (black-legged kittiwake): 128916101
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Entry
128916101 CDS
T09443
Symbol
RNF130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128916101 (RNF130)
Enzymes [BR:
rtd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128916101 (RNF130)
Ubiquitin system [BR:
rtd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128916101 (RNF130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
SP24
zf-ANAPC11
PspB
zf-RING_16
Prok-RING_4
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
128916101
NCBI-ProteinID:
XP_054073321
LinkDB
All DBs
Position
11:4626000..4681687
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AA seq
423 aa
AA seq
DB search
MSWRWARQHRNGGSSVLLLLLPLLWHGRVGADNASQAYYTALINVTVLSPERGGPTLLRI
DRGRYGQDSPKVEVKGLLVAPVPINGVADRLGCDPRTRFQVPPNTKQWIALLQRGNCTFR
EKILRAASHNATAVVIYNNISSEEPVTMTHQGTGDIVAVMITESKVKEILNYLEKNISVL
MAIAVGSRVPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYTSARDRNQRRLGD
AAKKAIGKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKACVDPWLS
EHCTCPMCKLNILKALGIVPNVPCTDNVAFDMERLSRGQPAGRRSALGDFANDSSLSLEP
LRTSGMSQLPQDGELTPRSGEINIAVTKEWFIIASFGLLSALTLCYMIIKATASLNANEA
EWY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagctggcggtgggctcgccagcaccggaacggcggctcctccgtcctgctgctgctg
ctgccgctgctgtggcacggccgggtcggcgccgataacgccagccaggcgtactacacc
gccctcatcaacgtgacggtgctgagccccgagcggggcggccccacgctgctgcgcatc
gaccgcgggcgctatgggcaggactcccccaaggtggaggtgaaggggctgctggtggct
cccgtccccatcaacggagttgcagatcgtctgggctgtgaccctcgaacacgtttccaa
gttccaccgaacaccaagcagtggatcgctttgctgcagcgaggaaactgtacctttaga
gagaaaatactgcgagcagcttcacataatgccacagccgtggtcatttacaacaatata
tccagtgaagaacctgtcacgatgactcatcaaggaactggagacattgttgctgtcatg
attacagaatcaaaggttaaggagatcctgaattacttggaaaagaatatctctgtcctg
atggcaatagcagtggggtcccgtgttcctccaaaaaacttcagtcggggctctctagtc
tttgtgtcaatatcattcattgttttgatgataatttcttcagcatggttaatattttac
ttcatccagaagatcaggtacacaagtgcacgtgacaggaatcagcgtcgtcttggagat
gctgccaagaaagccattggtaaattgacaaccaggacagtaaagaagggtgataaggaa
acagacccagactttgatcattgtgctgtctgcattgagagttacaagcagaatgatgtt
gttcgcattttaccatgcaagcatgttttccacaaagcctgtgtggatccatggcttagt
gagcactgtacgtgtccaatgtgtaaactgaacattttgaaggcactgggaattgtgcca
aatgtgccatgtacagataacgtagcctttgacatggaaaggctcagcagaggccagcca
gccggccggcggtcagcacttggcgattttgccaatgacagctctctcagcctggagccc
ctgcgcacctccgggatgtcacagctgccccaggacggagagctaacgccaaggtcagga
gagatcaacattgctgtgacaaaagaatggtttattattgccagttttggcctcctcagt
gcccttacactctgctacatgatcatcaaagccacagctagcttgaatgctaatgaagca
gaatggtattga
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integrated database retrieval system
