Rissa tridactyla (black-legged kittiwake): 128916153
Help
Entry
128916153 CDS
T09443
Name
(RefSeq) histidine--tRNA ligase, cytoplasmic isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128916153
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rtd01007
]
128916153
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rtd03016
]
128916153
Enzymes [BR:
rtd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
128916153
Amino acid related enzymes [BR:
rtd01007
]
Aminoacyl-tRNA synthetase
Class II (A)
128916153
Transfer RNA biogenesis [BR:
rtd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128916153
Prokaryotic type
128916153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2
tRNA-synt_2d
FAM198
HHH_3
Motif
Other DBs
NCBI-GeneID:
128916153
NCBI-ProteinID:
XP_054073436
LinkDB
All DBs
Position
11:21116949..21131818
Genome browser
AA seq
501 aa
AA seq
DB search
MADEAAVRAQAEAVRRLKQDKADPDEIAKEVAKLLEMKAQLGGDEGKHKFVLKTPKGTRD
YSPKQMAIRERVFNAIITCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGEL
LSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGQFDP
MIPDAECLKIVHEILSDLQLGDFLIKVNDRRILDGMFAVCGVPDSKFRTICSSVDKLDKM
PWEEVRSEMVGEKGLSPEAADRIGEYVQLHGGLDLIERLLQDPKLSQNKLAKEGLGDMKL
LFEYLTLFGITGKISFDLSLARGLDYYTGVIFEAVLLQQENDHVEEPVSVGSVAGGGRYD
GLVGMFDPKGRKVPCVGVSIGIERIFSILEQRVEASEEKIRTTETQVLVASAQKKLLEER
LKLISELWDAGIKAEVLYKKNPKLLNQLQYCEETGIPLVAIVGEQELKDGVVKLRVVATR
EEEFLRHPTVPFLAPCSFLEL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggcggcggtgcgggcccaggcggaggcggtgcggcggctcaagcaggat
aaggccgatcccgacgagattgcgaaggaggtggcaaaactgctggagatgaaggcgcag
cttgggggagatgaggggaaacacaagtttgtgctcaagaccccaaagggcacgcgggac
tacagccccaagcaaatggccattcgcgagagagtcttcaatgcgatcatcacctgcttc
aagcgccatggagcagaagtcattgatactccagtgtttgagctgaaggagacgctgacg
gggaaatacggtgaagactcgaagctcatctacgatctgaaagatcaaggaggagagctg
ctgtccctgcgctatgacctgacagtgcccttcgctcgctatttggcgatgaacaagatc
accaacatcaagcgctatcacatcgctaaggtctacaggcgggacaatccggccatgacc
aggggccgctacagggagttctaccagtgtgattttgacatcgctggccagtttgacccg
atgattcccgatgctgagtgcctgaagattgtgcatgagatcctgagtgatctgcagctt
ggggactttctcattaaggtcaacgatcgacgcatccttgatgggatgtttgcagtttgc
ggtgtcccagacagcaagttccgaacgatctgctccagcgttgacaaactggataagatg
ccgtgggaagaagtgaggagtgagatggtaggagagaaggggctctctcccgaggctgcg
gatcgcattggggagtatgtccagcttcatggtggcctggacctgattgagcggcttctg
caggaccccaagctgtcccagaacaagctggccaaggaggggctgggggacatgaagctg
ctgtttgagtacctgaccctgtttggcatcacagggaagatctctttcgacctgagcctg
gcgcggggtctggactattacacgggggtgatctttgaggctgtcctgctgcagcaggag
aacgaccacgtggaggagccggtcagcgttgggagcgtggctggaggcggtcgctacgac
gggctggtggggatgtttgatcccaagggacggaaggtgccctgtgtgggggtcagcatt
gggatcgagcggatcttctccatcctagagcagagggtggaggcctctgaggaaaagatc
aggacaacggagacacaggtgctggtggcctccgcccaaaagaagctccttgaagaacgg
ctgaagctcatctctgagctgtgggatgccggaatcaaggcggaagtgctgtacaagaag
aaccccaagctgctgaatcagctgcagtactgcgaggagacgggcatccccctcgttgcc
atcgtgggtgagcaggagctcaaggatggagtcgtcaagctgcgggtcgtggcaaccagg
gaggaggaatttctgcggcaccccacggtcccgttcctcgccccgtgcagtttcctggag
ctgtag
DBGET
integrated database retrieval system
