Rissa tridactyla (black-legged kittiwake): 128916159
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Entry
128916159 CDS
T09443
Name
(RefSeq) protocadherin-10-like
KO
K28836
protocadherin-10, delta 2
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
128916159
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128916159
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Protocadherins
128916159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_tail
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128916159
NCBI-ProteinID:
XP_054073449
LinkDB
All DBs
Position
11:complement(21082653..21087082)
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AA seq
964 aa
AA seq
DB search
MGAEAGCGRGQLFLRSLLFLLLAGPPAPRPASGQLRYAVPEELEHGAFVANLGEDLGLDV
STLSARRFRIVSRAGARQHLEVNLENGILFVNERIDREEVCEAGGSCLLHLQLLVESPLE
LYRVEVEVLDINDHAPTFPWQEYVLEVAESAVLGARFPLESAQDPDVGTNSVHTYRLSPN
GFFSLEVQTRSDASKFAELVLERALDREQQRTHRVLLTALDGGVPERSGTAHILVTVLDA
NDNVPAFDQPSYGVSLPEDAPAGTLVIQLNATDLDEGPNGEIEYSFSGHAPPRVRDLFHI
EPRSGQVLLKGPLDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSV
STPVLEDAPPGTVIAVISVLDRDSGDNGRVSCEVGPDVPFELRSSFRNYYTLVTTQALDR
EVVSEYNVSITARDMGSPALLTRSTLTVPVSDVNDNAPRFLQPSYSVYVMENNAPGASIC
SVSALDPDCQQNAYLSYSIADGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSFQIQV
QAQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPMPRNGSVATELVPRSAGPGYLVGTVSA
VDADAGLNSRLSYQLLQATDFTLFSLAPDTGELRTLRSFLEQDATRQRLLVQVRDGGQPA
LSATVSLLLSVVETMPQTLSDFSEFSLPPEASSSSPVTLYLLVSLGSISFTFLLAILILT
AIRCRGEHRSHQGDGCSPPRCHCCPGSRPSSDSLKTSNLTAQPPTGTTAATCLDVPGGGP
PGYCYKVCLGPESAQSDFMFLKPCSPPRNNEKDPGKRSQPGQHLQVSKQIKQPNMDWLPP
STQRLALKSSQSLEDVGEIRRALQKEHERLCTLVTPVSEFQKASVGTNSIWTPQYSSLYP
GHIPALDYQHNVYIPGTPTLLSSKDGPLFLGRENKNSFSTFGKRKKMTTYCDMHDSVVIN
NDLK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgaggcaggctgcgggcggggacagctcttcctccgctccctcctcttcctc
ctgctggccgggccccccgcaccgcgcccggcgagcgggcagctgcgctacgccgtgccc
gaggagctggagcacggagccttcgtggccaacctgggcgaggacctggggctggacgtg
tccaccctgtcggcacggcggttccgcatcgtgtcgcgggccggggccaggcagcacctg
gaggtgaacctggagaatgggatcctctttgtgaacgagcggatcgaccgggaggaggtg
tgcgaggctggggggagctgcctgctccacctgcagctcctcgtcgagagcccgctggag
ctctatcgtgtcgaggtggaggtactggacatcaatgaccacgcgcccaccttcccctgg
caagagtatgtgctggaggtggccgagtctgcagtgctcggtgcccgcttcccactggag
agcgcccaggatcctgatgtgggtaccaactcggtgcacacctaccggctcagccccaac
ggtttcttttcgctcgaggtgcaaacgcgcagtgacgccagcaagtttgcagagctggtg
ctggagcgcgccctcgaccgggagcagcaacgcacgcaccgggtgctgctcacagctctc
gacggcggtgtccccgagcgctcaggcacagctcacatcctcgtcaccgtgctggatgcg
aacgacaacgtgcctgcctttgaccagccctcgtacggtgtgagccttcctgaggatgcc
cctgccggcaccctggtcatccagctcaatgccactgacctggatgagggccccaacgga
gagatcgagtactccttcagtgggcatgcgccaccacgtgtccgggacctcttccacata
gagccccggagtgggcaggtgctgctgaagggccctctggactatgagcgggcaagcctc
catgagctctacgtgcaagcaaaggaccgtgggccctcggctgtggctgtgcactgccga
gtgcttgtccacctccttgatgtgaatgacaacgcaccagaagtgaccctcacctcagtg
tccacacctgtgctggaggatgccccaccaggcaccgtcatcgctgtcatcagtgttctg
gacagggactctggggacaatgggcgtgtgagctgcgaggtcggccccgacgtgcccttc
gagctccgttcctccttccgcaactactacacgctagtcaccacgcaggcactggaccgg
gaggttgtatccgagtacaacgtaagcatcacagcacgggacatgggctcccctgccctg
ctgacccgcagcaccctcaccgtcccggtgtccgatgtgaacgacaatgccccacgcttc
ctccagccctcctacagcgtctatgtgatggagaacaatgcgccaggtgcctccatctgc
tccgtcagcgcattggaccccgactgccaacaaaacgcctacctgtcctactccattgcc
gatgggcacatccatggcatgcctgtgggcacctacgtgtctatcaattcggacagcggg
cacatgtatgccctgcgctccctcgattatgagcagatccgcagcttccagatccaggtg
caagcacaggatgcgggtttcccgccactcagcgccaacgtcaccgtccacatctttgtg
ctggaccagaacgacaacgctccagtcatcgtttcccccatgccgcgcaatggctccgtg
gccaccgagctggtgccgcgatcagccgggcctggctaccttgtgggcacggtgtcggca
gtggatgcggatgcggggttaaactcacgcctctcctaccagctcctccaggccactgat
ttcaccctcttcagcttggcaccagacacaggtgagctgcgcaccctccgctcctttcta
gagcaggatgcaacccggcagcggctgttggtgcaggtacgtgacggtgggcagccagcc
ctctcagccaccgtgtccctcctgctttcggtggtggagaccatgccgcagactctctct
gacttcagcgagttcagcctccccccagaggcctcctcatcctccccggtcactctctac
ctccttgtctccctgggctccatctccttcaccttccttctcgccatcctcatcctcaca
gccattcggtgccgtggagagcaccgctcccaccaaggcgatggctgctcaccgccccgc
tgccactgctgccctgggtccagaccctcctctgacagcctgaagacgtccaacctgacg
gcgcagccccccacggggaccacagctgccacttgcctcgatgtgcccgggggtggcccc
ccgggctactgctacaaggtctgcctaggtcctgagtctgcccagagcgacttcatgttc
ctcaaaccctgcagcccgccccggaacaacgagaaggaccctgggaagcggtcccagcca
ggacagcatctccaggtctccaagcagatcaaacagcccaacatggactggctgcctcca
agcacgcagcgacttgctctaaagagctcccagagcctggaggacgtgggggaaatccgc
agagcccttcagaaggagcacgagaggctgtgcacgctggtgacccctgtctcggagttt
cagaaggcctcggtaggcaccaacagcatctggacaccacagtacagctccttgtaccca
gggcacatcccagccctggattatcagcacaatgtctacatccccggcacccccactctg
ctttccagcaaagatgggcctctcttcctaggccgggagaacaagaacagcttctccacc
tttggcaagaggaagaagatgacaacttactgtgacatgcatgacagtgtggttatcaac
aacgacctgaaataa
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