Rissa tridactyla (black-legged kittiwake): 128916224
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Entry
128916224 CDS
T09443
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128916224 (SOX30)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128916224 (SOX30)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
128916224
NCBI-ProteinID:
XP_054073570
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Position
11:2045842..2058372
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AA seq
616 aa
AA seq
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MEKPEPGEGNVPRCRGDSRESGGDFRRFPAPWWGKEESHVTIKKEGEQEGGVRESPKEVK
VPEKRGNGKEPWRGADVKAEPPDEAFEACRVKEEKGVAPVGSLCGPAHASPGDHKTQQNG
GLGILPEDLKIPVVFHPLPPGTRIQIQGPLPSELIHVTKVPVKQVPLKMQSLLEPSVKIE
TKNVPLTVLPSDSGMPDTPFSKDKNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISV
QLGLEWSKLTEEQKQPYYDEAQKIKQRHREEFPGWVYQPRPGKRKRFPLPVSAVFSGTSQ
SIITTSPAGICPFQSPAYSVVIPNVKNSIGHPVCEAPSAIRLPASSIQHAGPVTLFQTTS
ARTPSVAVPAPTLPLRPIISPQHFAEPAQAEALDGLNCSLKRRTPVFIESRNPSNITTTN
SRFSVSTSEPPKEYPGVSIFPRGVPLPQATPFLHSRLYESPPIGQPASLFGVPPRFPFYH
PYFVPGPHYFPSSTCPFSRPPFGCGNFSSSVSQCLGCYEDRYQRQEVMFSALDGNYPFKE
YSEEHIREDHRSCESLEVVSCYSSCNEERYLSPLPQLDVGELEEVLSATPSTPSSIHLIN
VIDSDEEDEVKLLREL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacccgagccgggggagggaaacgtccccagatgccgcggggacagcagagag
tcggggggtgatttcaggcgcttcccagctccatggtgggggaaagaagagtcccacgtc
accatcaagaaagaaggggagcaggaagggggtgtcagagaaagccccaaggaggtgaag
gtgccggagaagagggggaacgggaaggagccctggagaggagctgatgtcaaagcggag
ccgcctgatgaggcctttgaggcctgcagggtgaaggaggaaaagggtgttgccccggtg
ggctccctgtgtgggcctgctcatgccagcccaggtgaccacaagacgcagcagaatggg
gggcttgggatccttcctgaagatctgaagatcccagttgtgtttcaccccttacctcct
gggacccgcatacagatccaaggccctctgccgtcagagctgatccatgtgactaaagtg
ccagtgaaacaagtgccgcttaaaatgcagtctttactggagccttcagtaaagattgaa
actaaaaatgttcccctcacagtactgccctccgattcaggtatgccagatactccattt
agcaaggacaaaaatggccatgtaaagcgtccaatgaacgcatttatggtgtgggctagg
attcatcggcccgccctagcgaaagctaacccagctgccaataatgcagaaatcagtgtt
cagcttggactggagtggagcaaactgactgaagagcagaaacagccctattatgatgaa
gcccagaaaataaaacaaaggcacagagaggaatttcctggttgggtttatcaaccacga
ccaggcaaaaggaagcgtttcccactgcctgtctctgctgtattttccggcacttctcag
agtatcatcactacaagtccagctggcatttgtcccttccagtcacctgcttactctgtt
gtcatccccaatgttaagaacagtattggacatccagtctgtgaagctccttctgccatc
cgtctgccggcttcttccattcaacatgctggtccagttactcttttccagactaccagt
gcaagaaccccatcagtggctgttccagctccaaccctgcccttgcgccctataatttca
ccacagcactttgctgaacctgctcaggcagaagctcttgatgggctcaattgctctctg
aagagacgtacaccggttttcattgagagcagaaatccaagtaacataaccaccactaac
agcagattttctgtctctactagtgagcccccaaaggagtacccaggggtttctattttt
cctagaggtgtacctcttccccaagctaccccttttcttcactcacgtctctatgagtct
cctcccattggtcagccagccagtctgttcggagtacctcctcggtttccattttaccac
ccttattttgtacctggacctcactatttcccttcaagcacatgcccattcagccgacct
ccatttggctgcgggaatttctccagctcagtgtctcaatgccttggctgttatgaagac
aggtaccaaagacaggaggtgatgttttcagctctggacggaaactatcctttcaaggaa
tactcagaagaacatatacgtgaggaccaccgcagctgtgagagccttgaagtagtgtcc
tgttacagcagctgcaacgaggagcggtatttaagccccctaccgcagctggacgttgga
gagttggaggaggttttgtcagccaccccatctactccctccagcatccacctaatcaac
gtaattgacagcgacgaggaagacgaagtaaagttgttgcgagaattgtaa
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