Rissa tridactyla (black-legged kittiwake): 128916261
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Entry
128916261 CDS
T09443
Symbol
SH3TC2
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128916261 (SH3TC2)
Membrane trafficking [BR:
rtd04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128916261 (SH3TC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
SH3_2
SNAP
SH3_1
SH3_9
TPR_1
TPR_2
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
128916261
NCBI-ProteinID:
XP_054073626
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All DBs
Position
11:complement(12360605..12385388)
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AA seq
1364 aa
AA seq
DB search
MLDKPQRGIPAGEEYDSYHPRSPMLLPCWGRLQRTTAKTRRKWWWKTMASGTRPWERGTQ
PLPTEPCRSQWSLPPGRRGSEGGVKQTAGKPSPDNAGASETTEPATEEAEGSPDASSELL
AVVEDFPPEISLFFSVESRSSRCLNSQLQEAARKKLWALESDDRDVCALFKELSARLVCT
QAQEHRFLLTFKTLEEAWKFSTYLTLGYVGRCLEQLLFDQEYWLNCALMEDTEIRVTVDE
DRLATIYIGLLLQEGNFFSRAVPSVWQGEQEREEGLQLCKNELIHVKNIGEESKWEGMSL
LTGRRGLVSVTALEPLPDPFYQWFLKNYAVSFGISQEISGTASQPIVKGRCTATEDHRGA
AHNELNFSKGDSIEVIGFVIPGVPWFVGKSLSSGSIGFVPTRYINPETCEPLGEGLVFLS
EEEKSSLLSIPYNGDEQHFITLFNDLARTDITSVYRLDGFEPKAMFPKVRSEAVLRSCKD
IQLSWEEINGLATASTSELSSPGSESAPATLEDIILEKVDDFDDPKFFIDLNAGHMEDAD
VFDPILTFLNQDSYVPSFQSFYDLNFSFLNSTFYGFSDEDELVLYLETCRSWAKKTHSVW
AHVRLCFLLGKLCIKKIKFSQARVYFEEAMSILDRGFGDLPLLAALHVNLASIYLKQNMK
HKFSSLLGKTVALLVCLPGHSFNSENELEVMMYVLKEAIAVGNAPLEARVCFLIVKLFLQ
LGKNDEVLPFTEHLQCLITTLLSPDTSSVPLDATPILSYLYDKKYLPNIALASARLFVPS
VLKGAPTPIWRAGFILQNTSKLPGSQLERSSIPALACFYLKQALHFSCKSKAVPTQRMLC
AILSRMYLQHGVLDGAVCYAAMAVTLSRMMGKEEAFESSLSLGWMYLLNSQPGPAADIMW
QILHSLHRTDSVTQSGAVHNLLAIALKGEGQVQKAAENYLQALHKAKETGNKRNQAIALA
NLGQLSFSRGASQLSELYLLQSAQLYAELQGNEDLEMELAQVLLWLAQAMVNRQKVEDGK
LCYELALVFALKWNNLRSQLHITESLCHFYSKVSPNLQACITYHEHWVSLAQQLQDREME
DNARQTLSQLYQALGTSEALRQSLDCTKQSLRIFIDLEEPVKAAEAWLQAGRLYYLMQED
ELVEMYFQAAIQTALKRENFSLAMDLYEKAGDTFFNGSRNRDRAVEFYRGGAVPLARKLK
STKTELRLFNKLAELQIGLQGYEKALEFATLAARLSIRVGDQLQELVAFHRLATVYYFLH
MYEMAEDCYLKTLALRPPLLQCSGEALYYCKVYCHLGNLTLHKLKDEQDAAAYFLLALAA
ATELGDQELQGLIRAKLGDIQGPEGTPGCATYRPRWLSEGGHVV
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgctggacaagccccagcggggcatccctgcaggcgaagagtatgactcctaccacccc
cgctcgcccatgctcctgccctgctggggccgcctgcagcgcaccacagccaagacccgg
agaaaatggtggtggaagaccatggcatcaggcacacgtccctgggaaaggggcacccag
cccctgcccaccgagccgtgccgaagccagtggagcctacctccagggaggagaggaagt
gagggaggagtgaagcaaacggcgggcaagcccagcccagataatgctggggcatcagag
acaactgaacccgctaccgaggaagcagaaggctcgccggacgcctcctcagagctgctg
gctgttgtggaggactttccaccagagatttcactcttcttctccgttgagagccgctcc
tcacggtgcctcaattcccagctccaggaagcagccagaaagaagctgtgggccctggag
agtgatgacagagacgtctgtgccctgttcaaggagctgtcagccaggcttgtctgtacg
caagctcaggagcatcggttcctcctcaccttcaaaaccctagaagaagcctggaagttt
tccacatatctgactttagggtacgtgggcagatgcctggaacagcttctctttgaccag
gagtactggctaaattgtgctctgatggaagacacagagatcagagttactgtggatgaa
gatcgcttggccaccatatacataggtctgctactccaggaaggtaactttttttcccga
gcagtgcccagtgtctggcagggagagcaggagagagaggaaggcctgcagctctgcaag
aatgagctgatccatgtgaagaacattggagaggagtccaagtgggaagggatgtcctta
ctgacaggtcgacgaggcctggtgtctgtgacagctctagagccactgcctgacccgttt
taccagtggttcctgaagaattacgctgtgagttttggcatctcccaggagatcagtggg
acagcttctcagccaattgtcaaaggcaggtgcacagccacagaggaccacagaggagca
gcacacaatgaactgaatttctccaaaggagacagcatagaagtcatcggcttcgtcatt
ccaggagtcccatggtttgtgggcaaatccctcagcagtggaagcatcggctttgtccca
acccgatacataaatcctgagacttgtgaacctctgggagagggcttggtgtttctgagc
gaagaagaaaaatcctcgctcctgagcatcccctacaatggtgacgagcagcacttcatc
accctcttcaatgacctggcacgcactgacatcacttctgtgtaccggctggatggtttt
gaacctaaagccatgttcccaaaagtgcgatcagaggctgttctccgtagctgtaaagat
atccagctgtcttgggaggaaataaatggcttggctacagctagcacctccgagctgtcc
agtccagggagtgaatcagcccctgctacgttggaagatattatcctggagaaggtggat
gattttgatgatcccaagttctttattgacctgaatgctggacacatggaagatgctgat
gtctttgaccctatattgaccttccttaaccaagacagttatgtgcccagttttcaaagc
ttctatgatctcaatttttcctttctcaactccactttttatggtttctctgatgaggat
gaactggtcttgtaccttgagacatgcaggagctgggccaagaagactcattcagtttgg
gctcatgtcagactctgtttcctcttgggtaagctctgcatcaaaaagatcaagttctcc
caggctcgagtctactttgaggaagccatgagtatcctggacaggggttttggggacctg
cccctgttggctgcattgcatgtgaaccttgcctccatctacttgaaacagaacatgaag
cacaagttctcctcactgctggggaaaacagtggccttgcttgtctgcttacctggccac
tctttcaactcagagaacgagctggaagtcatgatgtacgtcctgaaggaagccattgct
gtgggtaatgctcccttggaggcacgggtctgcttccttattgtcaagctcttcctacaa
ctgggaaaaaacgatgaggtgctgccctttaccgagcatcttcagtgtctcatcaccact
ttactcagcccagacactagttctgtgccactggatgccacccccatcttgagctacttg
tatgacaagaagtacttgccaaatatcgcactggcctccgccaggttgtttgttcccagc
gtcctcaagggggcaccgacacccatttggagagctggcttcatcctccaaaatacttca
aaactcccgggaagccaactggagaggagcagcatcccagcactggcttgtttctatctc
aagcaagcactgcatttttcctgcaagagcaaagctgtgcccacccagaggatgctgtgt
gccatcttgtccaggatgtacctccagcatggcgtgttggatggggcagtttgttacgca
gccatggccgtaaccctcagcagaatgatgggcaaagaggaggctttcgagtcttccctc
tctttggggtggatgtatctcctgaacagccagccaggtccagctgcagacatcatgtgg
cagatcttgcactctctgcacaggacggacagcgtgactcagagtggagctgtgcacaat
ctcctggccatcgccctcaaaggagaagggcaggtgcaaaaggctgcagagaactacctc
caggccctgcacaaagccaaggagaccgggaacaagaggaatcaggctattgccctggct
aacctggggcagctgagcttctcgcgtggggcgagccagctgtctgagctctacctgctc
cagtcagctcagctctacgctgagctccagggcaacgaagacctggagatggagttggcg
caggtgctgctgtggttagcacaggccatggtgaacaggcagaaagtagaagatggcaaa
ctctgttacgaactggcgttggtttttgccctgaagtggaacaacttgaggagtcagctt
cacatcactgagtctctctgccatttctacagcaaagtgtcccccaatctccaggcctgc
attacctaccatgagcactgggtatcattggcacagcagctccaggacagagagatggaa
gacaatgcccggcagaccctcagccagctctaccaggctttgggcacatccgaggctttg
agacagtccctggactgcaccaaacagagtctaaggatcttcattgaccttgaggagcct
gtgaaagcagcagaggcctggctgcaggcaggaaggctctactatcttatgcaggaagat
gagctggtggaaatgtactttcaggcagccattcagactgctctgaaacgggagaacttc
tccttggccatggatctttatgaaaaagctggtgataccttttttaatggcagccgaaac
agagatcgagcggtggagttttataggggaggtgctgtgcccttggccaggaaactaaag
tccactaagacagagctacggctgttcaataagctggcagagctgcagatcgggctgcag
ggctatgagaaggcgctggagtttgccacactggcagccaggctgagcatcagggttgga
gatcaattgcaagagcttgttgcattccaccgcctggctacggtctactattttttgcac
atgtatgagatggcagaagattgctacctgaagacacttgccttgcgtccccccttgctg
cagtgctccggagaggccctgtactactgtaaggtgtattgccaccttggcaacctcacc
ctgcacaaactgaaggatgaacaggatgcagcagcctacttcctcctggccctcgccgca
gcgaccgagctgggagaccaggagctgcaaggcctcattcgcgctaagctgggtgacatc
caggggcccgagggcacgccgggctgtgccacataccgacccaggtggctgagcgaaggc
ggccacgttgtctga
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