Rissa tridactyla (black-legged kittiwake): 128916311
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Entry
128916311 CDS
T09443
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128916311
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Protocadherins
128916311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128916311
NCBI-ProteinID:
XP_054073736
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Position
11:complement(20726488..20736569)
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AA seq
813 aa
AA seq
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MAIARQVLCLCAFLSLPLARSEPIRYSVAEEAASGSVVANVAEDAGLSPAQLAARGARLA
SEDGRQHFRLDPATGRLVVAERLDREELCGQSATCTLPFELLLANPLQFFRVEVAVEDIN
DHSPVFPEERVTIKIPERSDLGSHFPLEGARDLDVGSNSIQAYSISPENEYFSVSFSSQS
EDDKYVELVLEKALDREEEGEVVFSLIAMDGGSPPRSGTTQIHIVILDVNDNSPVFTQKL
YVGQVLENAPVGSVVLRVVATDQDEGVNGDITYQFRQAVGQSNSAFMIDPTSGEIKLTKP
LDFEVAENHELSVRATDGGGLSAICKVLVEVVDVNDNAPELVVNSFNSPLPENAFPGTVV
ALFTVRDRDSGANGKISCALEDQLLFSLRLAYKNYYELVTVSMLDREETARHILIVTAAD
AGSPPLTTTQTFTVDISDVNDNAPAFNQTSYTMYVRENNVPMVLVGAVSAADADVGPNAK
VSYFLAPSHPTEQPPCSCISVNSENGHVFVLRPLDYEQVKQIDVLVSACDAGSPPLSANV
TVHLVVVDENDNAPLVLYPSQDSGPPSSELVPVSAEAGYLITKVVAVDADSGQNSWLSYH
LLKATEPGLFVVGAQSGEVRLKRPVTERDAVKQKLIVVVRDNGKPPLSATAALNALLLND
FSDVHLPHSSLATEDESGSLTTYLIISLTFVSLLFLASMTAFIARKVCKRKEPKAGHVLY
GAGNLQSSLADAATAGTLPHGYCYEISLTTGSGNSEFKFLKPILPSLPPQQCTTVGGTHD
EQDFPRGPITAEDMAPDNPGTLSGEQFNSLSFN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctgtgctttcctctccctgccgctcgctcgc
tccgagcccatccgctactccgtagccgaggaggcggcgagcggctccgtggtagccaac
gtggcggaggacgcggggctgtccccggcgcagctggcggctcgcggcgcccgcctggcc
tcggaggacggccggcagcactttcgcttagaccccgccaccggccggctcgtcgtggcc
gagaggctggaccgggaggagctgtgcggccagtccgctacgtgcacgctccccttcgag
ctcctgctggcaaacccgctgcagttctttcgggtggaggtggccgtggaggacatcaat
gaccattcccccgttttcccggaggaacgagttactattaagatcccggaaaggagcgac
ctgggctcgcatttccctctggagggtgctcgggacctggatgttggcagcaacagcatc
caggcttacagcatttctcccgagaacgagtacttcagtgtctccttttcaagtcagagt
gaggacgacaaatatgttgaactggtcttggagaaggctctagacagagaggaggaagga
gaggtggttttcagtctcattgccatggatgggggctctcctcccaggagtgggaccaca
caaatccacattgttattctagatgtaaatgacaactctcctgtcttcacacagaagctg
tatgttgggcaggttttggaaaatgcccctgtgggctctgttgttctcagagtggtggca
actgatcaggatgagggagttaatggggacatcacctatcagttcaggcaagcagtgggc
caaagcaactcagcattcatgatcgaccctactagtggtgaaattaagctcacaaagcct
ctggactttgaggtggcagagaatcatgagctcagtgtgcgggccacggatggcggtggc
ctgtcagcaatctgcaaggtgttagtggaggtggtggacgtgaatgacaatgcacctgag
ctggtggtcaactccttcaacagccccctccccgagaacgcattccctggaacagtggtt
gccctctttactgtcagggaccgggattctggtgcgaatgggaagatctcctgtgccctt
gaggaccagctattgttctccctgcgtctggcctataagaactactatgaactggtgact
gtgagtatgctggacagggaggagacggcacggcacatcctcattgtcacagcagcagac
gcggggtcacctcctctcacaaccacccagaccttcacagtggacatctccgatgtcaac
gacaatgcacctgccttcaaccagacatcatacacgatgtatgtgcgtgagaacaatgtc
cccatggtgcttgttggagctgtcagtgctgcagatgctgatgtggggcctaatgccaag
gtgtcatatttcctggcaccgtcccatcccacagagcagcctccctgctcctgcatctcc
gtgaactctgagaatgggcacgtgtttgtgctgcgacctctagactatgagcaggtgaag
cagattgatgtcttggtgagtgcctgtgatgcgggatctcctcctctcagtgccaacgtc
accgtccaccttgttgtggtggatgagaatgacaatgcgcctctggtgctgtacccatca
caggacagcggtccaccatccagcgagctggtgcctgtatcagctgaggcggggtacctc
atcaccaaagtggtggctgtggatgcagactcgggacagaactcgtggctctcataccac
ctgctgaaggccaccgagcccgggctgtttgtggtgggtgcccaaagcggggaggtgcga
ctgaagaggccagtgacagagagggatgctgtgaagcagaagctcattgttgtggtgcga
gacaatgggaagccaccgctgtcagccactgctgcactgaacgccctccttctcaatgac
ttctcagacgtgcacctacctcacagcagcctggccacggaggacgagagtggctccctg
acaacctatttaatcatttccttgacctttgtctcactcctcttcctcgcatccatgaca
gccttcatcgctcgcaaggtgtgcaagagaaaggagccgaaggcagggcacgtgctttat
ggtgctggcaacttgcagagcagcctggctgatgcagccacagcagggaccttgccccat
ggctattgctatgagatcagcctcacaacgggctctggcaacagcgagttcaagttcctg
aagcccatcctccccagcctgccaccacagcagtgcaccacggttgggggcacccacgat
gaacaggatttcccccgtggccccattactgcagaggacatggcaccagacaaccccggg
accctttctggagaacagttcaatagtctttcctttaactag
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