Rissa tridactyla (black-legged kittiwake): 128916353
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Entry
128916353 CDS
T09443
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtd04515
]
128916353
Cell adhesion molecules [BR:
rtd04515
]
Cadherins
Protocadherins
128916353
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
128916353
NCBI-ProteinID:
XP_054073828
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All DBs
Position
11:complement(20786860..20792680)
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AA seq
813 aa
AA seq
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MAIARQVLCLCAFLSLPLARSEPIRYSVAEEAASGSVVANVAEDAGLSPAQLAARGARLA
SEDGRQHFRLDPATGRLVVAERLDREELCGQSATCTLPFELLLANPLQFFRVEVAVEDIN
DHSPVFPVEQVVFKIPETSNPGSRFPLEGARDLDVGSNSIQAYSISPENEYFSVSFASQS
EDDKYVELVLEKALDREEEGEVVFSLIAMDGGSPPRSGTTQIHIVILDVNDNSPVFTQKL
YVGLVLENVPVGSVVLRVVATDQDVGVNGDITYQFSEGVGQSNSAFTIDSTSGEIKLTKP
LDFEVAENHELSVRATDGGGLSAICKVLVEVVDVNDNAPELVVSSFNSPLPENTFPGTVV
ALFTVRDRDSGANGKISCALEDQLLFSLRLAYKNYYELVTVNALDREEMARHILVVTAAD
AGSPPLTTTQTFTVDISDVNDNAPAFHQTSYTMYVRENNVPMVVVGAVSAADADMGPNAK
VSYFLAPSHPTEQPPCSCISVNSENGHVFVLRPLDYEQVKQIDVLVSACDAGSPPLSANV
TVHLVVVDENDNAPLVLYPSQDSGPPSSELVPVSAEAGYLITKVVAVDADSGQNSWLSYH
LLKATEPGLFVVGAQSGEVRLKRPVTERDAVKQKLVVVVRDNGKPPLSATAALNALLLND
FSDVHLPHSSLATEDESGSLTTYLIISLTFVSLLFLASMTAFITRKVCKRKELKAGHVLY
GAGNLQSSLADAATAGTLPHAYCYEISLTTGSGNSEFKFLKPILPSLPPQQCTTVGGTHD
EQDVPRGPITAGDMAPENPETLSGEQFNSLSFN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctgtgctttcctctccctgccgctcgctcgc
tccgagcccatccgctactccgtagccgaggaggcggcgagcggctccgtggtagccaac
gtggcggaggacgcggggctgtccccggcgcagctggcagctcgcggcgcccgcctggcc
tcggaggacggccggcagcactttcgcttagaccccgccaccggccggctcgtcgtggcc
gagaggctggaccgggaggagctgtgcggccagtccgctacgtgcacgctccccttcgag
ctcctgctggcaaacccgctgcagttctttcgggtggaggtggccgtggaggacatcaat
gaccattcccccgtattcccagtggaacaagtagtttttaagatcccggaaacgagcaac
cctggctcgcgtttccctctggagggtgctcgggacctggatgttggcagcaacagcatc
caggcttacagcatttctcccgagaacgagtacttcagtgtctcctttgcaagtcagagt
gaggacgacaaatatgttgaactggtcttggagaaggctctagacagagaggaggaagga
gaggtggttttcagtctcattgccatggacgggggctctcctcccaggagtgggaccaca
caaatccacattgttattctagatgtaaatgacaactctcctgtcttcacacagaagctg
tatgttgggctggttttggaaaatgtgcctgtgggctctgttgttctcagagtggtggca
actgatcaggacgtgggagttaatggggacatcacctatcagttcagtgaaggggtgggc
cagagcaactcagcattcacaattgattctactagtggtgaaattaaactcacgaagcct
ctggactttgaggtggcagagaatcatgagctcagtgtgcgggccacggatggcggtggc
ctgtcagcaatctgcaaggtgttggtggaggtggtggacgtgaatgacaatgcacctgag
ctggtggtaagttccttcaacagccccctccccgagaacacattccctgggacagtggtt
gccctctttactgtcagggaccgggattctggtgcgaatgggaagatctcctgtgccctt
gaggatcagctattgttctccctgcgtctggcctataagaactactatgagcttgtcact
gtcaatgctctggacagggaggagatggcacggcacatcctcgttgtcacagcagcagac
gcggggtcacctcctctcacaaccacccagaccttcacggtggacatctccgatgtcaac
gacaatgcacctgccttccaccagacatcatacacgatgtatgtgcgtgagaacaatgtc
cccatggtggttgttggagctgtcagtgctgcagatgctgatatggggcccaatgccaag
gtgtcatatttcctggcaccgtcccatcccacagagcagcctccctgctcctgcatctcc
gtgaactctgagaatgggcacgtgtttgtgctgcggcctctggactatgagcaggtgaag
cagattgatgtcttggtgagtgcctgtgatgcgggatctcctcctctcagtgccaacgtc
accgtccaccttgttgtggtggatgagaatgacaatgcgcctctggtgctgtacccatca
caggacagcggtccaccatccagcgagctggtgcctgtatcagctgaggcagggtacctc
atcaccaaagtggtggctgtggatgcagactcgggacagaactcgtggctctcataccac
ctgctgaaggccaccgagcccgggctgtttgtggtgggtgcccaaagcggtgaggtgcgg
ctgaagaggccagtgacagagagggatgctgtgaagcagaagctagttgttgtggtgcga
gacaatgggaagccaccgctgtcagccactgcggcactgaacgccctccttctcaatgac
ttctcagacgtgcacctacctcacagcagcctggccacggaggacgagagtggctccctg
acaacctatttaatcatttcgttgacctttgtctcactcctcttcctcgcatccatgaca
gccttcatcactcgcaaggtgtgcaagagaaaggagctgaaggcagggcacgtgctttat
ggtgctggcaacttgcagagcagcctggctgatgcagccacagcagggaccttaccccat
gcctattgctatgagatcagcctcacaacgggctctggcaacagcgagttcaagttcctg
aagcccatcctccccagcctgccaccacagcagtgcaccacggttgggggcacccacgat
gaacaggatgtcccccgtggccccattactgcaggggacatggcaccagagaaccctgag
accctctctggagaacagttcaatagtctttcctttaactag
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