KEGG   Rissa tridactyla (black-legged kittiwake): 128916470
Entry
128916470         CDS       T09443                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor RAE1 isoform X1
  KO
K14298  mRNA export factor
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03013  Nucleocytoplasmic transport
rtd05164  Influenza A
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128916470 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    128916470 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtd03019]
    128916470 (RAE1)
   03036 Chromosome and associated proteins [BR:rtd03036]
    128916470 (RAE1)
Messenger RNA biogenesis [BR:rtd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     128916470 (RAE1)
Chromosome and associated proteins [BR:rtd03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    128916470 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_C Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd WD40_RFWD3 ANAPC4_WD40 Beta-prop_RSE1_2nd Beta-prop_EIPR1 Beta-prop_ACSF4 Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_SPT8 PepSY
Other DBs
NCBI-GeneID: 128916470
NCBI-ProteinID: XP_054074205
LinkDB
Position
12:complement(6496816..6517579)
AA seq 370 aa
MSLFGSTSGFGTGGTSMFGSTTADNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVH
PMAAVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKKYL
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgagtctgtttggatcaacatcggggtttggtactggaggtaccagcatgtttggcagc
acaactgcggataaccataatccaatgaaggatattgaagtaacatctccacctgatgac
agcatatcttgtttagcatttagtccgccaacattgccgggtaatttcctcattgcagga
tcatgggcaaatgatgttcgctgctgggaagttcaggataatggacagacaattccaaag
gctcagcagatgcacacagggcctgtactagatgcctgctggagtgacgatgggagtaaa
gtatttactgcttcctgtgataaaacagccaaaatgtgggatctcaacagtaatcaagct
attcagattgcacaacatgatgctcctgtgaagactatccattggattaaagcaccaaat
tacagctgtgtgatgacaggaagctgggataaaactttgaagttctgggatacccgctca
ccaacaccgatgatgacattgcagcttcctgaaagatgttattgtgcagatgtggttcat
cctatggctgctgtggccactgcagaaaggggtttgatagtttatcagttagagaaccaa
ccttctgaatttagaagaatagaatctcctcttaaacaccagcatcgctgtgttgctatt
tttaaagacaaagtgaacaagcctactggatttgcccttggaagtattgaaggaagagta
gctattcattatatcaaccctccaaatcccgcaaaagataatttcacttttaaatgtcat
cgctccaacggaacaaacacatcagcacctcaggatatctatgctgtaaatgggatagcc
tttcaccctgtccatggtactcttgcaacggtaggatctgatggtagattcagcttttgg
gataaagatgcacgaacaaagctaaaaacatcagaacaacttgaccagccaatatctgct
tgttgtttcaaccataatggcaatatatttgcatacgcttccagttacgattggtcaaag
ggtcatgaattttataatccacagaagaaaaactacatctttctgcgaaacgcagcggaa
gaattaaagcctaggaataagaagtacttgtga

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