Rissa tridactyla (black-legged kittiwake): 128916509
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Entry
128916509 CDS
T09443
Symbol
STAU1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtd01009
]
128916509 (STAU1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128916509 (STAU1)
Protein phosphatases and associated proteins [BR:
rtd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128916509 (STAU1)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128916509 (STAU1)
mRNA cycle factors
Stress granule specific factors
128916509 (STAU1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
128916509
NCBI-ProteinID:
XP_054074310
LinkDB
All DBs
Position
12:complement(9746388..9779092)
Genome browser
AA seq
697 aa
AA seq
DB search
MSQVQIQNPSAALAGSQILNKNPSLSQPLSIPSTTSSLPSENAGRPIQNSALPSASVTST
NAAAAPSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWE
AEGTSIKKAQHAAAAKALEGTKFPKPTARPSRSEGKNPDSVTPTVELNALCMKLGKKPMY
KPIDPYTGMRSTYSYTMRGGTYPPPRYFYPFPVGPLLYQVELSIGGQQFHGKGRTRQAAK
HDAAAKALKVLQNEPLPEKPEVNGKEPDDENLNKSEISQVFEIALKRNLPVNFEFFPLKQ
VTKESGPPHMKSFVTKVSVGEFMGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKP
RIKKKTKSIVKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYMLITERGLPRRREFVMQV
KVGVHTAEGMGTNKKVAKRNAAENMLEILGFKVPQPQPPKPALKTEEKTPVKKPADGRKV
TFFEPGSEETSTSNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVGANQGHHTKEFSRAAP
NPAKATVTAMIARELLYGGTSPTAETILKNNNSSGYVPHGPLTRPSEQLDYLSNVQGIQV
EYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQTTEMP
RTGNGPMSVCVKQEMESDPLLKPANSNTLGQTLDSTA
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagttcaaattcagaatccttctgctgcccttgcagggagccaaatattgaat
aaaaacccatctctctcacagcctttgagtattccttctactactagttctttaccctct
gaaaatgcaggtagacctatccaaaactctgctttaccctctgcgtcagttacatccacc
aatgcagctgcagctccttcaaacatggcaaaccccaaagagaagactccaatgtgtctt
gtgaatgagttagcccgtttcaacaagattcagcctgagtataagcttttgagtgagcaa
ggtccagctcattctaaggtgtttacagttcagctgactcttggggaccagcactgggaa
gctgaaggaactagtattaaaaaagcgcaacatgcagcagctgccaaagctttggaaggg
acaaaattccctaagcctacggctcgtccatctcgtagtgaaggcaaaaatccagacagt
gtaacccccacagtggagttaaatgcactttgcatgaagctgggaaagaaacctatgtac
aaacctatcgatccttacacggggatgagatcaacttacagctatactatgagaggtggc
acttatcctcctccacggtacttttacccatttcctgttgggcccttactttatcaagtt
gagctttcgattggagggcagcagtttcatgggaaaggaagaacaagacaagctgctaag
catgatgcagctgctaaagcactgaaagttctgcagaatgagcccttgcctgagaaacca
gaggttaacggaaaagaaccagatgatgaaaatctcaataaatctgaaataagccaagtt
tttgagattgcacttaaaaggaacttgcctgtgaattttgagtttttccctctgaaacag
gtgaccaaggaaagtggtcctccccatatgaagagctttgtaaccaaggtgtcagttgga
gaattcatgggtgaaggtgaaggaaagagcaagaagatctccaagaaaaacgctgcaata
gcagtcctagaagaactgaaaaaattgccaccccttcctacggttgagaaaatgaagcca
cgaatcaaaaagaaaacaaaatcaatagtgaagctgcagacgagtccagaatatggtcaa
ggaatgaatcccatcagcagacttgcccagatacagcaggccaagaaagaaaaggaacca
gagtacatgctcatcacagaacgtggccttccaaggcgcagggagtttgttatgcaggtg
aaagttggtgtacacacagccgaaggaatgggcacgaacaaaaaagttgctaaacgcaat
gcagctgaaaatatgttggaaattttaggtttcaaagtccctcaacctcaacctccaaag
ccagcattaaagacagaagagaagacaccggtaaagaaaccagccgatggaagaaaagta
accttttttgagccaggctctgaagagacttcaactagtaataaagaagatgaatttagg
atgccttatctcagccatcagcagcttcctgctggaattcttcccatggtccctgaggtt
gcacaggctgtaggagccaaccaaggacaccacaccaaagagttcagtagggcagcccca
aatcctgccaaggctaccgtaacagcaatgattgctagagagcttttgtatggtggtact
tctcctactgctgagaccatattaaagaataacaactcatcaggctacgtaccccacgga
ccacttactaggccctctgagcagctggactatctttccaacgttcaaggaatccaggtt
gaatataaagactttccaaaaaataacaagaatgagtttgtatctcttataaactgttcc
tctcagccaccactgatcagtcatggaattggaaaggatgtagaatcttgccacgatatg
gctgcactgaatattttaaagttgctgtctgagttggaccaacaaaccacagagatgcca
cgaacaggaaatggaccaatgtctgtatgtgtgaaacaagaaatggaaagtgaccctctt
ctcaaaccggctaactcaaacactttgggacaaacactggacagcactgcctaa
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