Rissa tridactyla (black-legged kittiwake): 128916562
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Entry
128916562 CDS
T09443
Symbol
GDF5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04060
Cytokine-cytokine receptor interaction
rtd04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
128916562 (GDF5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128916562 (GDF5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
rtd04052
]
128916562 (GDF5)
Cytokines and neuropeptides [BR:
rtd04052
]
Cytokines
Transforming growth factors (RSTK binding)
128916562 (GDF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
RBD_ZCCHC3_2nd
Motif
Other DBs
NCBI-GeneID:
128916562
NCBI-ProteinID:
XP_054074430
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Position
12:complement(18802477..18805602)
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AA seq
500 aa
AA seq
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MKILHFLTLLLWHLTWLSLDLVPGALSNSEAGQSNPGSKLGFLKAEGKERNPSARAGTLR
TASHGYSAATSKARTKSSAAQAGALLAKNDESKKVLSRTAATEGKVGHLPSRPSGVRTVT
PKVQNLSSKVALKKTGTSSTDTDSFKTKKTKEPVTQREAKETFRHPPITPHEYMLSLYRT
LSDAERKGVNGSVKLEAGLANTITSFIDKGQDERAPTIRKQKYIFDISALEKDGLLGAEL
RILRKKPSDTWKSHSSGKTSQVKLFSCSTNRQAATLLDSRTVSITDTPKWEVFDIWKLFR
NFKNLVNLCFELETFDRGRAVDLRSVGFNRTGRQVNEKALFLVFGRTKKRDLFFNEIKAR
SGQDDKTVYEYLFNQRRKRRAPLATRQGKRPAKNLKARCSRKALHVNFKDMGWDDWIIAP
LEYEAYHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDS
ANNVVYKQYEDMVVESCGCR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgcattttctcactttactgctttggcatttgacttggctgtctctggat
ctagttcctggagcgctgagcaattctgaagcaggccagagtaatccaggatctaaacta
ggttttttaaaagcagaaggaaaagagaggaatccctcagcacgggcaggtacactgagg
actgcaagccatggatatagcgctgcgacctcaaaggccaggactaaaagcagtgctgcg
caggctggagctctgctggccaagaacgatgaatcaaagaaggttctctcaagaacagca
gccacggagggcaaggtaggacatctccccagcagaccttctggagtaaggacagtgacc
ccaaaggttcaaaatcttagcagcaaggtggctttgaaaaaaactggcacaagcagtact
gacactgattctttcaaaaccaaaaagactaaagagcctgtaacccagagggaagctaag
gaaactttcagacatccccctataacgccacatgaatacatgctctctttgtacaggact
ctctcagatgcagaaagaaaaggtgttaatggaagtgtaaaactggaggctggacttgcc
aatacaataaccagctttatagacaaaggacaagacgagcgagcgccaactataagaaaa
caaaaatatatttttgacatcagtgcattagaaaaagatggtttgctgggagcagagctt
cgaatattgaggaaaaagccttctgatacctggaagtctcattcttctggaaaaacttcc
caagtgaagttatttagttgctctaccaacagacaagcagcaacactcctggactctcgt
actgtcagtatcacagatacaccaaagtgggaagtgtttgacatctggaaacttttcagg
aactttaaaaacttggttaacttgtgtttcgaactggaaacttttgacagggggagagct
gttgatctcaggagcgtgggatttaatagaacaggaagacaggtcaatgaaaaggctctc
ttcttggtatttgggcggacgaaaaaaagagacttattcttcaatgaaatcaaagctaga
tccggccaggatgacaaaactgtttacgagtacttattcaatcagcggcggaagagaaga
gctcctctagcaacacggcaagggaagaggcccgctaagaatctgaaggcaaggtgtagc
agaaaagccctccatgtgaattttaaggatatgggctgggatgactggataatagcccct
ctagagtacgaagcgtatcactgtgaagggctttgtgaattcccccttcgatcccacctg
gagcccaccaatcacgcagttatccaaacgttaatgaactcgatggacccagaatcaaca
cccccgacttgctgtgtcccaaccaggctgagtcctattagcattcttttcattgactct
gcaaacaatgtggtctacaagcagtatgaggacatggttgtggagtcgtgtggttgtagg
tag
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