Rissa tridactyla (black-legged kittiwake): 128916670
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Entry
128916670 CDS
T09443
Symbol
SOGA1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128916670 (SOGA1)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128916670 (SOGA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TPR_MLP1_2
TSC22
DUF8067
Motif
Other DBs
NCBI-GeneID:
128916670
NCBI-ProteinID:
XP_054074606
LinkDB
All DBs
Position
12:14273257..14300226
Genome browser
AA seq
1472 aa
AA seq
DB search
MLEMRDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRVAQTGQVDGELIHS
LEQDVKVAKDVSVRLHNELEVVEKKRIRLEEENEDLRQRLIETELAKQVVQNEMDKLREN
SLKKRGSRSIGKTDKKPSVQEDSADLKCQLHFAKEESALMCKKLTKLAKENDGMKEELLK
YRSLYGDLDSSLSVEELADSPHSREAELKVHLKLVEEEANILSRRIVELEVENRGLRAEM
DDMKGQGDRELPGQDTRFLAGISVCGDAGDTVAELRRHLQFVEEEADLLRRSLLELEDQN
KLLLNELTKYKSDHELDVTLSEDSCSVISEPSQEELATAKVQISELSGKVKKLQYENRVL
LSNLQRCDLASCQTTRPMLETDAEAGDSAQCIPTTGWRDGVGSSEADGQDRLPSGGKVPD
GPTKLLKAKDLETLLGIRDQAALVSKAIDILISDANGFTSGLKACLDNECTGGLLGEAVG
SGGESPSDAKLMNVLLMRLGVLQQDLGCFTRKVDHFTSGLKEHTDSFPFSGPGSHDTTKE
GLQKEHASDFQPDFRDADPYRIPHAKDTDPAHPRSYKTCRPEENDSYATEMKELQLVLSE
ANESLRGLQEQLSQERQLRKDEVDNFSQKICQLKEDHQKALLRREFELQSLNLQRRLEQK
FWSQEKNLLVQESQQFRQSFLLLFMKLKWFLKRWRQGKMVHSEGEDFLEVNSMKELYLLL
EEEELAPQQQADNKTCTGDPWTPNTPNECIKTLADMKVTLKELCTELREERRGASELQQQ
FTKAKAAWEMERAELKCHIAQLESKAGKGIAERALPDWKVALKREREEHQHLLAESYSAV
MDLTKQLQISEKNWNQEKVELLARFKEEQQQAEQQAKDLQNKINQLQKGTNPWALKHSEM
EKHGSNWKEALNEKITDKETISEAEAKGTNLKRTKSVSSMSEFESLLDCSPYLPGKTAPG
LGDHSRGKKASTAAQLLPNGIRDSTGVPPSNCTYVNIEQPAPDSLAKEKLGISSWDYSRA
SSLSGHDQSQKQMQRSYTAPDKTGIRIYYSPPVVRRLEAPLVHNKEGKIMIEPGFLFTMA
KPKEPEESASAESTYSQWLCNFSKQQRELLDGGTVESAVPPVPRFPSSLHDLEISGNMSD
DMKEITNCVRQAIRSSSLERKVKSTSSQTVGLAHVGTQTIQTVSVGLQTDLPRGSGMHGK
SWSPRSSSLVSVRSKQISSSLDKVHSRIERPCCSPKYGSPKLQRRSSSKLDASKDRSLWN
LHQSKQNGSAWARSTTTRDSPVLSNINDGLSSLFSVVEHAGSTESIWKPGCSESGRAKPE
APKYGLVQEFFRNVCGRAQSPTAPPEKKEATGEEGSKRAEHPSLATHHPAENISRVLNKK
VLKQSSCEDPKPSSPGQGSKDAALRDPDLISAIASEDMACDCSSQSLTSCFARPSRSTVR
HSPSKCKLHPADPPRAEEKPGASTCNVKPSAF
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atgctggagatgagggacgtctacatggaggaggatgtctaccagctgcaggagctccgg
cagcagctggaccaggccagcaagacctgccgcatcctgcagtaccggctgcgcaaggcc
gagcgccgcagcctgcgcgtggcacagacgggccaggtggacggcgagctcatccacagc
ctcgagcaggacgtcaaggtggccaaggacgtctccgtgcggctccacaatgagctggag
gtagtggagaagaagaggatcaggctggaggaggagaacgaggacctgcgccagcggctc
atcgagacggagctggccaagcaggtggtgcagaacgagatggacaagctccgagagaat
tccctgaagaaacgggggtctcgctccatcgggaaaactgacaagaaaccatcagtgcag
gaggacagcgcggacttgaagtgccagctgcattttgccaaggaggagtcagccttgatg
tgcaagaagctgactaagctggccaaggagaacgacggcatgaaggaggagctgctgaag
taccggtccctctacggggacctcgacagctccctctcagtggaggaactggccgactct
ccccattcccgggaggccgagttgaaggtccacctcaagctggtggaggaggaagccaac
atcctcagccggaggatagtggagctcgaggtggaaaaccgcgggctgcgggcagagatg
gacgacatgaagggacagggggacagagagctgccggggcaggacacgcggttcctggca
ggcatttctgtctgtggggacgcaggggacactgtggcagagctgcggcggcacctgcag
ttcgttgaggaggaggctgacctgctgaggcgctcgctgctggagctggaggaccagaac
aagctcctcctgaatgagttgaccaagtacaagtcggaccacgagctggatgtgacgctg
tcggaggacagctgctcagtgatcagcgagccctcgcaggaggagttggccacggccaag
gtgcagatcagcgagctgagtggcaaggtgaagaagctgcagtatgagaaccgtgtgctg
ctctctaacctccagcgctgcgacctggcctcctgccagaccacccggcccatgctggag
accgacgctgaggccggcgactcagcacagtgcatccccaccaccggctggagggacggg
gtgggcagcagcgaagccgatgggcaggacaggttgcccagtggtgggaaggtgcctgat
ggtcccaccaagctgcttaaggccaaggacctggagaccttgctgggcatccgggatcag
gcagcacttgtcagcaaagcgattgacatcttgatttcagatgccaatggtttcacctcc
gggctgaaggcttgcttggacaacgagtgcacgggggggctgctgggcgaggcggtgggt
agcggcggcgagagccccagcgatgccaagctgatgaacgtgctcctcatgcggctgggc
gtgctccagcaggacctgggctgcttcacgaggaaggtggaccacttcaccagtggcctc
aaggagcacacggactctttccccttctctggccctggcagccatgacaccaccaaagaa
gggctgcagaaggaacacgcctctgacttccagcctgattttagggacgccgacccttac
cgcatcccccatgccaaggacacggaccccgcgcatccccggagctacaaaacctgccgg
cctgaggagaacgactcctacgccaccgagatgaaggagctgcagctggtgctgtcagag
gccaacgagagtctgcggggactgcaggagcagctctcgcaggagaggcagctgaggaag
gacgaggtggacaacttctcacagaagatctgccagctgaaggaggaccaccagaaagct
ctgctgcggcgggagttcgagctgcagagcctgaacttgcagaggaggctggagcaaaag
ttctggagccaggagaagaacctgctggtgcaggagtcacagcagttcaggcagagcttc
ctcttgctcttcatgaagctcaagtggttcctcaagcgctggcgccagggcaagatggtg
cacagcgaaggcgaggactttttggaggtgaacagcatgaaggagctgtacctgctgctg
gaggaggaggagctcgccccacagcagcaggcagacaacaagacatgcaccggggacccc
tggacccccaacacgcccaatgagtgcatcaagacgctggcagacatgaaggtgaccctg
aaggagctgtgcacggagctgcgggaggagcggcgcggtgccagcgagctgcagcagcag
ttcaccaaggccaaggctgcctgggagatggagcgcgccgagctcaagtgccacatcgcc
cagctggagtcgaaggcaggcaaagggatcgcagagcgcgcgctgccagactggaaggtg
gcgttgaagagggagcgtgaggagcaccagcatctcctggccgagtcctacagcgccgtc
atggacctcaccaagcagctgcagatcagcgagaagaactggaaccaggagaaggtggag
ctgctggcccgcttcaaggaggagcagcagcaggcagagcagcaagcgaaggacctgcag
aacaaaatcaaccagttgcagaaaggaaccaacccgtgggcattgaagcactctgaaatg
gagaagcacggcagcaactggaaagaggctctcaatgaaaaaatcacagacaaagagaca
atctctgaagcagaagccaagggaaccaacctcaaaaggaccaagtctgtttcctccatg
tcagagttcgaaagcttgcttgactgttctccctacctccctggaaagactgcgccgggg
ctgggtgaccattcccggggcaaaaaggcatccacggctgcccagctgttgcccaatggg
atccgggacagcactggcgttcctccctcaaactgtacatatgtgaatattgagcaacct
gcccctgacagcctggccaaggagaagctgggcatctcctcctgggactactcgcgggca
agcagcctctccgggcatgatcaatcccagaagcaaatgcagaggagctacacggcacct
gacaagacggggatccgcatctactacagcccaccggtggtgcggcggctggaggcacct
ctggtgcacaacaaggaagggaagatcatgattgaacctggcttcttgttcaccatggcc
aagccgaaggagccggaggaatcagccagcgctgagagcacctacagtcagtggctgtgc
aacttctccaagcagcagcgggagctgctggatggtggcacggtggagagcgcggtgccg
ccggtgccccgcttcccctcatcactgcacgacctggagatctccggcaacatgagtgac
gacatgaaggagatcaccaactgtgtgcggcaggccatccgctccagctcgctggagagg
aaggtgaaaagcacctccagccagacggtgggactggcccacgtggggacgcagacgatc
cagacggtgagcgttggcctgcagaccgacctgccgcgtggcagcggcatgcatggcaag
agttggtccccgcgtagctcctcccttgtgtctgtgcgcagcaagcagatctcctcctcc
ctggataaggtccactccaggattgagaggccatgctgctccccaaaatatggctctcca
aagctccagaggaggtcttcctccaagctggatgcctccaaggacaggagcctctggaat
ctgcaccagagcaagcagaatggctctgcctgggcccgctccaccaccacccgtgacagc
cccgtcctcagcaacatcaatgatggtttgtccagcttgttcagcgtggtggagcacgcg
ggcagcaccgagtccatctggaagccgggctgctctgagagcggccgggccaagcctgaa
gcacccaagtacggcctcgtgcaggagttcttcaggaacgtctgcgggcgggcgcagagc
cccactgcccccccggagaagaaggaggccactggggaggagggcagcaagagagctgag
caccccagcctggccacccaccacccggctgaaaacatctcccgtgtcttgaacaagaaa
gtcctcaagcagagcagctgcgaggaccccaagccctcgtcccccggccaggggagtaag
gacgcagccctgcgggaccccgaccttatctcggccatagccagcgaggacatggcgtgt
gactgcagctcccagtccctcacctcctgcttcgcccggccgtcccgctccactgtccgc
cattccccctccaagtgcaaactgcaccccgcggacccccccagggcggaggagaagccg
ggggcctcgacctgcaatgtaaaaccaagtgcattttaa
DBGET
integrated database retrieval system
