Rissa tridactyla (black-legged kittiwake): 128916688
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Entry
128916688 CDS
T09443
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtd03041
]
128916688 (DHX35)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128916688 (DHX35)
Spliceosome [BR:
rtd03041
]
Complex C
Other components
Complex C specific factors
128916688 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
AAA_22
ABC_tran
DEAD
AAA_19
Cas3-like_C_2
AAA_7
UPF0203
Motif
Other DBs
NCBI-GeneID:
128916688
NCBI-ProteinID:
XP_054074645
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All DBs
Position
12:complement(12940487..12971664)
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AA seq
712 aa
AA seq
DB search
MAAPVGPVKFWKPGTEGPGVSVSEERQSPAESSGITVVYNPYASLSIEQQRQKLPVFKLR
NHILYLVENYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRV
ADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHE
RTLYTDIAIGLLKKVQKKRGDLRLIVASATLDAEKFKDFFNQNDTGDPSKDTSVILTVEG
RTFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARA
LSRTGMKKHLRVLPMYAGLPSPEQMKVFERVSHSVRKVIVATNIAETSITIHGIAFVIDC
GFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRNRSGKCYRLYTEEDFEKLPKSTVP
EMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFVIPPNQKTQAARQHRKFAV
EEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVRFKVPKKSSE
GDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQ
TAKYYMRDVTAVESAWLLELAPHFYQQGTVRNRHKAQTHLSLKAKRAKVDDH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtgggaccggtgaagttttggaagccgggcacagaaggtcctggtgtc
agtgtctcagaggagagacagagtcccgctgagagtagtggcataaccgtcgtctataat
ccttatgcttccctttctattgaacaacaaagacaaaagctgcctgtttttaagctaaga
aatcacatactttatctagtggagaattatcaaactctggtgattgttggggaaacaggt
tgtgggaaatcaacgcagattccgcaatacctagcagaagctggctggacagccgaagga
agagttgttggagtgacacagcctcgtcgggttgctgctgtttcagttgcaggccgagtt
gctgatgaaagaggtgcagtgttgggtcatgaagttggatattgtattcggtttgatgat
tgcacggatccacaggctaccagaattaagtttctaactgatggtatgctggtgagggag
atgatggctgatcctttattaacaagatacagtgtcctcatgctggatgaagcccatgaa
aggactctttatacagatattgccattggcttgctaaaaaaggttcaaaagaagcgtggg
gatcttcgactgattgtggcttcagccaccttggatgcagagaaattcaaggatttcttt
aatcagaacgatactggtgaccccagcaaagataccagtgtgatccttactgtcgagggc
agaacgtttcccgtggacatcttttacatccagagtcctgttccagactatataaaatca
actgtggaaactgcaatgaaaattcaccagatggagaatgatggtgatatactggcattt
ttaactggccaggaggaggtggagactgttgtttctatgcttatagaacaggctcgagcc
ctttctcgcactggaatgaaaaagcacctccgtgttcttcccatgtatgctgggctgcct
tctcctgagcaaatgaaagtgtttgagagagtttctcacagtgtcaggaaggtgatagta
gccaccaacattgctgagacctccatcacaattcacggcattgcgttcgtaattgattgt
ggttttgtgaagcttcgggcctataaccccaaaacagccatcgaatgccttgtggtggta
ccagtatctaaagcttctgctaatcagagggcagggcgtgcaggacggaaccgctctgga
aaatgttacagactctatacagaggaggactttgagaagctgccgaagtccactgttcct
gagatgcagcgcagtaaccttgctcctgtcatcttgcagctgaaggctttgggaatcgac
aacgtgctcaggttcccctttctttcgccacctcctgcacagtcaatggtgcaagcttta
gaactgctgtatgctttaggaggtttggatatgcactgccgtttaacagagcctcttgga
atgagaatagcagagtttcctttgaatcctatgtttgcaaagatgcttctggaatcagga
aattttggctgctcgcaggagattttgacaattgctgccatgatgcagattcaaaacatt
tttgtgatccctccaaatcaaaaaactcaggctgccaggcaacacagaaagtttgctgtg
gaagaaggtgatcatctcacgatgcttaatgtttatgaagcctttgtcaaacacagcaag
agctctcagtggtgtcaggaacactttctgaactacaaagggcttgtaagagcttctgtt
gtaagggagcagctgaaaaagcttctcgtccgctttaaagtgccaaagaagtccagtgaa
ggtgatccagatcctgttttgagatgtatagtttctggattctttgctaatgcagctaaa
tttcactccactggagcttacaggactatccgtgatgaccatgaacttcatatccacccc
acttcagtgttgtatgcagagaaacctccgcgctgggtagtctacaatgaagtcatacag
actgctaaatactacatgagagatgtgactgccgttgaatctgcttggctcttggaactg
gcacctcatttttaccagcaaggaacggtacggaatcggcataaagcccaaacgcatctt
tccttgaaagcaaaaagggctaaagtagatgaccactga
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