Rissa tridactyla (black-legged kittiwake): 128916877
Help
Entry
128916877 CDS
T09443
Symbol
CFAP54
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtd03037
]
128916877 (CFAP54)
Cilium and associated proteins [BR:
rtd03037
]
Motile cilia and associated proteins
Sperm associated proteins
128916877 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
CID
DDE_Tnp_1_3
zf-TFIIIC
Motif
Other DBs
NCBI-GeneID:
128916877
NCBI-ProteinID:
XP_054075035
LinkDB
All DBs
Position
1:complement(168462263..168573480)
Genome browser
AA seq
3189 aa
AA seq
DB search
MAEPSGPQLPASVPNPPPATFFGAVAPGNPVVDSFETELRDVLGFLRRLAGAGEAQPQQH
DLHRRGANTLFNIWIKYKPRLPEWYYNEKLLKVGDSLAQIKEYKLALLQCYGRYLQQFIS
VNPDDIIDDVHRFKSTFFPNGLRDKNAVLTFHALQERNVCIYQMVCNSDRNLQNQESLQT
CFDVLSSLRLAMXVALPQESLCWLIYNGTIHIYTICRHLMVIGQSAKVLEYLLWASICME
SSIPLLSVHYLTWRATLYTAVSQCYFDCQASIHGEIFARRGLIKIDELKQLSNTSSSLEN
SETKKIFREATLKMSVMIFKRAVYESRRKPKSYFRPKLRVSLKEAQNLPWPRTATERLLT
EMFDSAAAQFLAILEALSDSSRHVLRPAPPVPDEIEIRDVISELFFAGLEILSGGMSSTG
IQGSYCTDHFGIINPSSTLLQLILTGEKGVSGDAAVKFIKLAFSYEEWDVFDSAIEFVVN
FLQAQEDPTWKKAEMELKLLTLMQPLLFPRKFKHGFSISENTTKEARLPHGSENKQTIGK
TSLRHGEPSHDLMILATTVYSCVSTSKQNIQPDKEILVDVTMFLWQKCKMGLQQIRLSGS
DCFKYIHKYKAYQWVRVLWIINEVIQKSIIADINVVILAEITLSLTTVLENVADSTSKSK
KKAGKRSASLWQDETCDIPEILMKSPEEQLQVAYENLEKAINGVNTSRLMTLLPDGKSIF
DNCCTKVDSNDQNLNFVLGCGNDKAGTGNGFVMDLHLELIQAQHRVAVKLLKMTQGAQKD
DRSLKSSKSHVKNIKDFSYLTEAFIMRKIKKNKLSRAIFLMQKAAQNFPKELTTSSQRQL
LEEALTLIEQVEAEQSALYQSLKEAMSRKKKSRTPPPPLLLSRSHCSMTFKPAPFSSDTQ
VSWYSILGSVAGGRNMKVRLNNNKLPNAGEEIPADGKSLLEIQGLDPNEKYVFAVAAYSS
DGKLIGDAIGETTKPILAYPPLSATTVRAYLTEVAYQTGNYTLAREAFSPMWDYFVSNSS
PLPANTAVISASSNLTISENRLRFEAVSQTSPITLHLFLRNIFAVCDINVMEGALFCDSI
CSNEILYKEQVARLSECERMTVAIELSNCLNDASYTLQSVVQCYGLLAPIIYHKISSVPV
VQILIKCLAVLQEIPSATLQRRQAGCYESIQHMIACTSFYTAKVLRSWQEYELAVIIVNY
GKKLLDSSPAISPCQSGAVKTEETQTNKEVKTTSAKTSHLAAMEKATENLSALESNLLKL
TKPARGSELTGQEDPLFLYPVISCWTSNNAYREVMKFRKKSRFLEFFVQVLHKILNEEKF
QCVLEWAGNVQVYLKRRNDHLLCNNGISTQETSSPTLSEGMDRNTTGVVRFQKSVETSPS
KKPEASTLKKPKTEALSPIRRRQTLRQYLMKHPDITKCPEAQRKCKEELQKVARHTLVVL
LQPIVSDYLNRKKFHQICLEEMPWRSQMNIYLAVAHYNLFRKKLEEQYNIGICGSWHLDR
YNILDPEIFSLNNSGTVVVREAAENNMKTPTSFLLKKSAMTKKQTCTDKSSESSINLSGT
DTPRTQTTKDTEIPVSHSPKECKQFLSHTILLEHFTKIFLHLRRAVVLAHRGGHWTLLQN
ACRELWNYTQELQLIANHSHSDMDAFPITRGFLRNTIWLPFYLASDMIIDMITELQASRS
LKILDPEGDFSIPSCIGGITDENGGSNLHPQSPLDDVNVVDLKWICNLILKTIELLYQMK
KWEALVHIAVQFNIFTHERYTEQVSPLLVYAQRQLLERIQQFSGHDSHESHFIKHLSDNA
HKMSCRNYIGQKLQLPVAHSAHEQIFPGCFFYPEMKKDYTDCSQAKALVYVPLDVNDTLK
CFRETLQKSKYHSRSLRHSRKLLSLFLAHTQEHAGRAISSHISSNRRLEFSVGPEMIFLP
TPHDISQEKFNFSSMVESKPIPQSQLSVIISSYEQTIGILEINNQRDLKVQALHELGNLH
FYAGNKRVAFKYWCQALDETLNIADALNNWQELGFPKNATDCFAVGRSTDISQKFLSQAG
VWGCLHAAVLVAKIAQYITTSKMRLRTKYCYFSAILFKTLFRASLPHPTSDCDFAQYETN
MLIPGIDLFSDRYRADISTVVASLNFLMFELHCAKQNLIILPLFTLYQYIVSEICKDPAK
CIEGRIFKIKVLTDIGFFMEAFHELSLLNCGERIPWRIPAGYRKTEQMKALQKFDSSESL
LSITNLQVLEDIFNWSLSLTMVPLCNQQIMNKLTLAKMHFIICLSATINNIPEKVEKHVY
SVESNSLKEPSKIRASDVKVDADKNSRQQEQRGTMMHLVDCKDELNMAMLKGILLTEAEE
SLSHLVQNIQDKYDGEISWCSAEDLETLIEAKLQLAAISQQRHQAAFTVALAFSAIQLLQ
DAKIFRIEVTHFQEEKDERECSDSYVKDVQLPHSTTAQDHMNVHLWLRCRTTLVTALVTQ
IHGVCDIDENDVAERRSLIKEAIIEAEAFGDTEAQAEMMVQATILDLQEKRPVTGIKLLL
ENIISLLQEDTFISPPASLTLVKSMLLLADVLTLQTAEDTEHCSSTVEPLNLLILAHELT
VKAIFVCGEPIERHIEDSTLTCLALPTKNIYLPHINLLAQVKMRIGQTLAEKVACTPERR
DPLQWLRALKHLESALRLCRASATKKLDMEAELLFQIGKVERQITEAGNSKSSRAAETLL
KAIELSQQHDQKFELIRRSYLEIALLYLHFATNSEDVSQTDKMVPSKSNISSGELSSEQA
RKSEGYKVQAWIAVRAATQVSEAVLASQLLIGMKSVKEHSMEDAVQQKIPEFAFMDLLAS
YRDFLSDGYNVVSESPKASSTENKQITQDKQSQSEGRESLATKANQKKETITWVHLIRYH
SYLKRLYNTNLLFAAPNSGTGSLSARDGHLSSVFDTGIVLRIAEMHSFLKKHLFEYSLCC
LENFPEELHDVELRLGRPADSLKMSLEITGTTSNMSHVRIASPVPVITEADSQTESRAAN
ASNKEINIQWYIPSLAKPSNDTETKVLLLYAYNTKPVKISNIKIFSSMSIFSGHLWIPLA
RIISLREQLSNLKQQVEMLMQSSKTLSSASEPTRFLEESEILKRIPSKKPQMNVAKVHLD
EKTEEMAKRCLSEVKALLSVVPALSLPLTEIPFDVTLQSIASLEDMFDPASGCIITEESL
FNWIISLFH
NT seq
9570 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccctccggcccgcagctgcccgcctccgtcccgaaccccccgccggccacc
ttcttcggggccgtagcgccgggcaacccggtggtagacagcttcgagaccgagctgcgg
gacgtcctgggctttctgcggcggctggcaggcgcgggagaggcccagccgcagcagcac
gacctgcaccgccgcggagcaaatactttgtttaatatttggatcaaatataagcctcga
ctgccagagtggtattacaatgaaaaacttctgaaagttggtgattcccttgctcagatc
aaagaatataagttagcacttctacagtgctatggaaggtaccttcagcagttcatttct
gtaaaccctgatgacatcatagatgacgtgcatcgatttaaatccacctttttcccaaat
ggtttgagagataaaaatgcagtacttacgttccatgcgttgcaagagagaaatgtttgc
atttatcagatggtttgcaacagtgacagaaatctccagaatcaagagtccctgcagact
tgtttcgatgtcttgtcctcattacgactcgctatgtaagtggctctgcctcaggagagt
ttgtgttggcttatctacaatggtactattcatatttacaccatatgcagacatttgatg
gtgataggtcagtctgctaaggtcctggaatacttactgtgggccagtatatgtatggaa
tcatccattccactcttatctgtacattatttgacgtggagagcaaccctatatactgca
gtttctcagtgttactttgattgccaagccagcattcatggagagatatttgctcgccgt
ggtctgattaaaattgatgaactgaagcaattatcaaataccagttcttcgttggaaaat
tcagagacaaaaaagatttttagagaggccactctaaagatgtcagtgatgattttcaag
agagcagtatatgaatccagaagaaagccgaaaagctactttcgacctaagttaagagtt
agcctgaaagaagcacaaaatctgccgtggcctcgcactgctactgaacggctgctgaca
gaaatgttcgacagtgccgcagctcagttccttgccatcctggaagctctgtctgatagt
agcaggcatgtgttgcgccctgctccacctgttcctgatgaaattgaaattcgtgatgtc
atttcagagcttttttttgcaggcctggaaatcctctcaggtggaatgagcagtaccggt
attcaaggaagctattgcactgatcattttggtataattaatccatcatcaacccttctg
caattgatactaacaggagaaaagggggtgtctggagatgctgctgtgaaatttataaaa
ttagctttcagctatgaagagtgggacgtgtttgattctgctattgaatttgttgttaat
tttcttcaggctcaagaggacccaacatggaagaaagctgaaatggaactcaaacttctt
acactgatgcaacctttactatttcccagaaaatttaaacatggtttttctattagtgaa
aatactaccaaagaagctaggctgcctcatggttctgaaaacaagcaaacaattggaaag
acttccttaaggcatggagagccttctcacgatcttatgattttggcaacaacggtgtat
tcctgtgtctccacatctaagcagaatatccaacctgacaaggaaatacttgttgatgta
acaatgtttttgtggcagaagtgtaaaatgggacttcagcaaatccgactgagtggaagt
gactgcttcaaatatatccacaaatacaaagcttaccaatgggttcgtgtactttggata
ataaatgaagtaattcagaagagcatcatagcagacattaatgttgtaatacttgcagag
ataaccttatctctaaccacagtattggaaaatgtagctgattctacaagtaagtcgaag
aaaaaagcaggaaaaagaagtgcctctctctggcaagatgaaacctgtgatattcctgaa
atactgatgaaaagtcctgaagaacaattacaagttgcttatgaaaatcttgaaaaagca
attaatggagtaaacacatctcgcttaatgacccttctaccagatggaaagtcaatattt
gacaactgctgtacaaaggtggactcaaatgatcagaatttgaattttgttttgggatgt
ggtaacgataaggcaggaacgggtaatggttttgtaatggatttgcacttggagctcatt
caggcccaacatcgagtagctgtgaaacttcttaaaatgacacaaggtgctcaaaaggat
gacagaagtcttaagtctagcaagtctcatgtgaagaatattaaagatttcagttattta
acagaggcatttataatgagaaaaataaaaaagaataagctatctagagcaatctttttg
atgcaaaaggctgcacagaatttccctaaagagttaaccacttcttcccaaaggcagcta
ctggaggaagcgctaactttaatcgagcaagttgaagctgaacaaagtgcattgtatcag
agtctcaaagaggctatgagcagaaagaaaaaaagcaggactcctcctcctcctctgtta
ctttctagatcacattgctccatgacatttaagccagcccctttctcttcagatactcag
gtttcgtggtacagtattttgggctctgtagcaggaggaaggaatatgaaagtaaggtta
aataacaataaacttccaaatgcaggagaagagataccagctgatgggaaaagcctcttg
gaaatacagggcttagatcccaatgagaaatacgtatttgcagtcgcagcatattcttct
gatggaaaacttattggtgatgccattggggaaacgactaagccaatccttgcatatcca
cctctttctgctactactgttcgagcctatctaactgaggtagcctatcagactggcaac
tacacattagccagagaagcattttcaccaatgtgggattattttgtttcaaattcttct
ccactgcctgccaatacagctgttatttctgcaagtagcaatttgactatatctgaaaac
aggttacgttttgaagctgtatctcagacttctcctattaccttgcacctctttctgagg
aatatatttgctgtctgtgacattaatgtcatggaaggagcactcttctgtgattccatc
tgttccaatgagatactttataaggaacaagttgctagattatcagaatgtgaaagaatg
actgtggcaattgaacttagcaattgtttgaatgatgcaagttataccctgcagtctgtt
gtacaatgttatggtctccttgctccaattatttaccacaagatttcttcagtgccagta
gttcagattctcattaaatgcttggctgtccttcaagaaattccaagtgctactttgcag
aggaggcaggcaggatgttacgagagtattcagcatatgatagcttgtacttcattttat
acagcaaaggtactacgttcatggcaagaatatgaactagctgtaattattgttaactat
gggaaaaaattgttggattcctcgccagcaatctcaccctgccagtcaggagctgtgaaa
actgaagaaacacagactaacaaagaggttaaaaccacttctgcaaagacatcccattta
gctgcaatggaaaaagcaacagaaaatctaagtgctcttgaatcaaatctcctcaaactg
acaaaaccagctcgtggatcggagcttacaggacaggaagatcctttgttcctctaccct
gtaatttcatgttggacatcaaacaatgcgtatcgagaagtgatgaaattcagaaagaaa
tcgcgttttcttgagttctttgttcaagttttgcacaaaatcctgaatgaagagaagttt
caatgcgttctggaatgggcaggcaatgtgcaagtttacttgaaaaggaggaatgaccac
cttctctgtaataatggaatttcaacacaagaaacaagttctccaactctgtcagaaggc
atggatagaaacactacaggagtggtgaggtttcagaaaagtgtggagacctcaccttca
aagaaaccagaggcatcaactttgaagaaaccaaaaacagaagccttgagtcctattcga
agaagacagactcttagacagtatttaatgaaacatccagacataacgaaatgtccagaa
gcacaaaggaaatgcaaggaagagttgcaaaaagtagctcgccacaccttagtagtactt
ctgcagccaatcgtgagtgattacttaaaccgaaagaagtttcatcaaatatgtcttgaa
gagatgccgtggaggtctcagatgaatatctatctggcagttgcacactacaacttattt
agaaagaaactggaagagcaatataatattggaatttgtggttcatggcatctggacagg
tacaatattttggatcctgaaatattctcattaaataattctggcactgtagtggtgaga
gaagctgcagagaataacatgaaaacaccaacttcttttctccttaaaaagtcagcaatg
accaaaaaacaaacctgtacagataaatcttctgagtccagcattaacctgagtggaaca
gatactcctcgaactcaaacgacaaaggatacagaaatacctgtctctcattcccccaaa
gaatgcaagcagtttctgtcacataccattttattggagcattttacaaaaatctttttg
catttaagaagagcagtggttcttgctcaccgtggtggccactggacgttgcttcaaaat
gcttgtcgagaactttggaactatactcaagaattacaattgattgctaaccattcacat
tccgatatggatgcatttcccattaccaggggttttcttaggaacaccatctggttgcca
ttttatttggcatcagacatgatcattgatatgataactgaactacaagcaagcaggtct
cttaagattttggatcctgaaggagacttctccattcccagttgtataggaggtattact
gatgagaatggtggttctaatctccatccacagtctcccctggatgacgtgaatgtggtt
gacttgaaatggatatgtaatctgattcttaaaacaatagaattgctatatcaaatgaag
aagtgggaagcactggtacacatagctgtgcaatttaacatatttacacatgagagatac
acagaacaagtgagtccactgctggtgtatgctcagaggcagctgctggaaaggatacag
caattcagtggccatgacagccatgaatctcatttcataaaacatctatctgataatgca
cataagatgagttgcagaaactacatagggcagaaattacagctgcctgtcgcccattct
gctcatgaacagatttttcctgggtgctttttctaccctgagatgaaaaaggattataca
gattgcagtcaagcaaaagctctagtttatgtacctctcgatgtgaatgatacactgaaa
tgttttagagaaactctacaaaaatctaaatatcacagcagatcattgagacacagcaga
aaactactttcattatttcttgcgcacacacaagaacatgctggaagagcaatcagcagt
catatctcttcgaacagaaggctggaatttagtgtgggacctgaaatgatatttctacca
acaccacatgacatttctcaagaaaaattcaatttctccagtatggttgagagtaaacca
ataccacagtcacagctttcagtcattatctcttcctatgaacaaacaattggaatcctt
gaaataaacaaccagagagacctcaaggttcaggctctacatgaacttggaaatcttcac
ttttatgctggaaacaaaagagttgcttttaaatattggtgtcaagcccttgatgaaaca
ctcaacattgctgatgctcttaacaactggcaagagttaggttttccaaaaaatgctaca
gactgctttgcagttggaagatcgactgatattagtcagaaatttctttctcaggctgga
gtttggggatgtttacatgcagcagtcttagtggctaagatagctcagtatataacaaca
tcaaagatgagattaagaactaaatactgctatttttctgctatactttttaagaccctg
tttagagcttctcttccacatccgacatctgactgtgactttgcacaatatgaaacaaat
atgcttattcctggtattgacttgttctctgatcgctacagagctgatatctccactgta
gttgcaagtctgaatttccttatgtttgaactacattgtgcaaaacaaaatttaataatt
ttaccattgttcacattataccaatatattgtttctgagatttgtaaggacccagctaaa
tgtattgaaggaagaatcttcaagattaaagtacttacagatataggattttttatggag
gccttccatgaactgtctttgcttaattgtggagagagaattccatggagaatacctgca
ggatacagaaaaactgaacaaatgaaggctttacagaaatttgactcctcagaatctctc
ctgtccattacaaatttacaggtactggaagacatatttaattggagtctgtctttaaca
atggtgccattgtgcaaccaacaaattatgaataaattaaccttagccaaaatgcatttc
atcatttgcctttctgccacaataaataatatacctgaaaaagtggaaaaacacgtctat
tctgttgagagcaacagcttgaaggagccaagcaaaatcagagcatcagatgtaaaagtt
gatgctgataagaattcaagacaacaggaacaaagaggcacaatgatgcatctcgttgac
tgtaaagatgaactaaatatggccatgctgaaggggattttattgacagaagctgaagaa
agtcttagccatcttgtacagaacatacaggacaaatacgatggggagatatcttggtgt
tctgctgaagatttagagacacttattgaggccaaacttcagcttgctgctatttctcag
caaaggcatcaagcagctttcactgttgctttggctttctctgcaattcaacttctccaa
gatgcaaaaatttttaggattgaagtgacacattttcaagaagaaaaggatgaaagggag
tgttcggactcttacgttaaagatgttcaactgcctcacagtacaacagcacaagatcat
atgaacgtacatctgtggctaaggtgtcgtacaacgttagtgactgcactagtaacacag
atacatggcgtttgtgatattgacgaaaacgatgtggccgaacgcagaagtctcataaaa
gaagcaataatagaggcagaagcctttggagatacggaggctcaggctgaaatgatggtg
caagctactattcttgacctgcaagaaaaacgtcccgtgacaggcattaaacttcttttg
gagaatatcatcagtttactccaagaggatacatttatttcccctccagcttctttgact
cttgtgaaaagtatgcttctgctggcagacgtactaacactccaaacagcagaggataca
gaacattgctcttctacagtggaaccattaaacttactaattttggcacatgagcttacc
gttaaagcaatttttgtttgtggagaacccattgaacggcatatagaagacagtacattg
acttgcctggccctacctacaaaaaatatctacttgccacatatcaacttgctagcgcaa
gtcaaaatgagaatcggacagacattagctgaaaaagtagcttgtacgcctgaaagaaga
gatccactgcagtggctacgtgctctcaaacatctagaatcagcattgaggctttgcaga
gcatctgctacaaaaaaattagatatggaagctgaacttctttttcagataggtaaggta
gaacgccagataactgaagcaggcaatagcaagtcatctcgagctgctgaaaccctgttg
aaagctatagaactcagccagcaacatgatcaaaaatttgagttaataagaagatcatac
cttgaaatagcactattgtatttgcattttgccacaaatagtgaggatgtgtcacagaca
gataagatggtgccttccaaatcaaacatctcttctggagaactctcttctgagcaggcc
cgaaaatcagaaggctacaaagtacaagcctggattgcagtaagagcagctacacaggtt
agtgaagctgtgcttgcttctcagctattaattggaatgaagagtgttaaagaacacagc
atggaggatgcagtgcaacagaaaatcccagaatttgctttcatggatcttcttgcttcg
tacagagatttcttatctgatggatacaacgttgtctctgaaagtcccaaagcatcttct
actgaaaacaaacaaatcacacaagacaagcagagccaaagtgaaggaagagaaagtctt
gccaccaaggccaaccagaagaaagagacaataacatgggttcacttaattcgctaccac
agttatttaaaaagactttataacacaaaccttctatttgctgcccctaactcaggaact
ggatcactttctgcaagagatggacaccttagttccgtttttgacacaggaattgttcta
cgcatagcagaaatgcattcatttcttaaaaagcatttgtttgaatattcactgtgttgt
cttgagaatttcccagaagagctacatgatgtagaattgcgacttggtaggccagctgat
tctttaaagatgtctcttgaaattactggaactacatcaaatatgtcacatgtgagaata
gcttctccggttcctgtcatcacagaagcagacagtcagacggagagcagggcagcaaat
gcttcaaataaggaaattaacattcagtggtacattccttctctggcaaagccatcaaac
gatacagagactaaggttttactgctttatgcttataatacaaagcccgtcaagattagc
aacatcaagattttcagttcaatgtctattttttcaggccacttgtggattccgttggct
agaattatttctttacgggagcaattatctaatctgaagcagcaagttgaaatgttgatg
caaagttctaaaaccttgtcttcagcttcagaacctacacgttttcttgaagaaagtgaa
attttgaaaagaattccttcaaaaaaaccccaaatgaatgttgcaaaagtacatcttgat
gaaaaaacagaagaaatggctaaaaggtgtttatctgaagtcaaagcactgctgtctgtt
gttccagccctgtccttgccattaactgagatcccatttgatgttactttgcaatcaata
gcaagtttggaagatatgtttgatcctgccagtggatgtataataactgaagaaagtctt
ttcaactggatcatttctctgtttcactaa
DBGET
integrated database retrieval system
