Rissa tridactyla (black-legged kittiwake): 128916940
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Entry
128916940 CDS
T09443
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtd03036
]
128916940 (SBNO1)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128916940 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
128916940
NCBI-ProteinID:
XP_054075221
LinkDB
All DBs
Position
13:complement(5894635..5930193)
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AA seq
1406 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDSPDMVLANPAPTPAVQQSVPLSALELGLETEAT
AAVKQEPETVSTPALLNVRQPPSTTTFVLNQINQLPTLGTTIVMTKTTPVTTTRQTITVA
KIIQTSTTTRPSVAAPAVRNALTTTPSKDQIQLKDLLKNNSLNELMKLKPPPNIAQPVAT
AAKIIVVSPKVVNATSPADLSNGAVKKEASTKEVARIWINDIKMRSFSPTMKVPAVKEEE
EPEEEDEEEMGHAETYAEYMPIKLKIGLRHPDPVVETSSLSSVTPPDVWYQTSISEETID
SGWLSALQLEAITYAAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLGRKRA
VWFSVSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIG
ESQSGGKYKTRLKQLLHWCGEDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKL
PKARVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMK
LRGMYIARQLSFSGVTFKIDEVLLSQEYVKMYNKSVKLWVSARERFQQAADLIDAEQRMK
KSMWGQFWSAHQRFFKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEG
GGELNDFVSTAKGVFQSLIEKHFPAPDRKKLFSLLGIDLTAQSNNNSPRDSPCKENKIKK
RKGEEISREAKKARKTGGLAGSSSDESESESDASDNEESDNESSRFLSSGDDDDFNPFRD
ESSEDDEDDPWLIRKEHKKNKDKKKKKSIDPDSIQSALLASGLGSKRPSCFTSTVGTTTS
STNTSANSNTNSSFVTSQDAVERAQQMKKELLDKLEKLAEDLPPNTLDELIDELGGPENV
AEMTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGIS
LQADRRAKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFAS
IVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDF
PGDFFKDVRQGLIGVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFSD
TLNAVIQNAKKNGRYDMGILDLGSGDEKVRKADVKKFLTPGYSTSGHVELYTISVERGMS
WDEATKIWAEQTGPDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLETC
ADLKKKYKKVPSEDALPHWLEQYNSSADTCTHAYWRGNCKKAGLGLVCEVGLRCRTYYVL
CGSVLSVWTKVEGVLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQ
SQQLAVQQQQIWQQHHPQSITNFNNA
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccaggacaagatctgttgcttgctgctttgagtgagagtggaatcagtcca
aatgatctatttgatattgactcgccggacatggttcttgcaaatccagcaccaactcca
gctgttcagcagtcagtgccacttagtgcattagaactaggcttggagactgaggccaca
gctgctgtgaaacaagaaccagagactgtatcaactccagccttattaaatgttcggcaa
ccaccatccaccacaacctttgtgctgaatcaaataaatcagcttccaactttggggact
accatagtgatgacaaaaacaacacctgttacaactacgaggcagactatcactgtagca
aaaatcattcagaccagcacaactactcgaccctcggttgcagcaccagcagtacgcaat
gccttgaccactacaccttcaaaggaccagattcagctgaaagatctgctaaagaataat
agtcttaatgaactcatgaaattgaagccacctcctaatattgcccaaccagtagcaaca
gcagcaaaaataattgtagtttctccgaaggtggtaaatgccaccagtccagccgatcta
agcaatggtgcagtgaagaaggaggcttccacaaaagaggtagcaagaatatggataaat
gacattaaaatgagaagtttttcacctactatgaaagtaccagcagtaaaagaagaggag
gaacctgaggaagaagatgaagaagaaatgggccatgcagaaacttacgctgagtatatg
ccaataaaattaaaaattggtctacgtcatcctgacccagtagtggaaaccagctcatta
tccagtgtgactcctcctgatgtgtggtaccagacatcaatatcagaagaaacaattgat
agtggctggttgtcagctttgcaacttgaagcaatcacttatgcagcccagcaacatgaa
acattcctgcccaatggagacagagctggattcttgataggggatggtgctggtgtagga
aaaggaaggaccatagctggaataatctatgaaaattacttgttaggcagaaaaagagca
gtctggtttagcgtgtcaaatgatctgaaatacgatgctgaaagagatttgagagatatt
ggagcaaaaaacatactggttcattcattaaacaagttcaagtatgggaaaatttcttcc
aaacataatggaagtgtgaagaaaggtgtcatctttgctacctattcttctcttattggt
gaaagccagtctggtggtaaatacaaaaccagattaaagcagcttcttcactggtgtggt
gaagactttgatggagttattgtatttgatgagtgtcataaagctaagaatctgtgtcct
gttggttcatcgaaaccaacaaaaacaggtctggctgtattggaacttcaaaataaactt
ccaaaagccagggttgtttatgctagtgccacaggtgcatctgagccaagaaatatggcg
tatatgaaccgtcttggaatatggggtgaaggaactccatttagggaattcagtgatttc
attcaggctgttgaaagaagaggtgttggtgccatggaaatagttgctatggatatgaag
ctgagaggaatgtacatagcaagacagttgagtttttcaggtgtaactttcaaaattgat
gaagttctgctttcacaggaatatgttaaaatgtacaataaatctgtgaaactgtgggtc
agtgctagagagaggtttcaacaagcagctgatcttatcgatgcagaacaacgaatgaaa
aagtccatgtggggtcagttttggtcagctcatcagaggtttttcaagtacctttgcata
gcatctaaagtgaagagggtggtgcagctcgctcgggaagaaatcaagaatgggaagtgt
gtcgttattggcctgcagtcaacaggagaagcaagaacattagaagctttggaggaaggt
ggtggtgaactgaatgactttgtttctacagcaaaaggagtattccagtctcttattgaa
aagcactttccagctcctgacaggaagaagctgtttagcttgttgggaattgacttgact
gctcaaagtaataacaattcacccagagacagcccttgcaaggagaacaaaataaagaaa
cggaaaggtgaagaaataagcagagaagccaaaaaagctcgcaaaacaggtggccttgca
ggtagcagctctgatgagagtgaaagtgagtctgatgcttcagataatgaagaaagtgac
aatgagagctccagattcttgagttctggagatgatgatgacttcaacccgttcagagat
gaatccagtgaagatgatgaagatgatccctggttaattagaaaagagcataaaaaaaat
aaagacaagaaaaagaagaaaagtatagatccagattctattcaaagtgccttactagct
tctggtcttggatcaaaacgacctagctgttttacttccaccgttggtaccaccacttct
agtaccaatacgtcagcaaacagtaacacaaacagcagctttgtaacaagtcaggatgct
gttgaaagggcccaacaaatgaaaaaagaactgcttgataaactggaaaagctggctgaa
gatcttccacctaatacactggatgagcttattgatgaactgggtggtcccgaaaatgtt
gcagagatgacaggccgcaaaggaagagttgtaagcaatgatgatggcagcatatcttat
gagtcaaggtctgaacttgatgtgcccgttgaaattctgaacatcacagaaaagcagagg
ttcatggatggagataagaacattgccataatctcggaggctgccagctccggtatatca
ttgcaagcagaccgtagagctaagaatcagagacggagagttcacatgactctggagttg
ccatggagtgcggatagagcaatacagcagtttggaagaactcatagatccaaccaagtg
actgctccggagtacgtgttcctaatttctgaattggcaggagagcaaagatttgcatct
atagttgcaaaaagactggagagcttgggagccctcacccatggtgacagacgggctaca
gaaactcgagacctcagcagattcaattttgacaacaagtatggcagaaatgctttagag
attgttatgaaatccattgtgaacttagactccccaatggtctcgccgcctcctgatttt
cctggagacttcttcaaagatgttcgtcagggattgattggcgtaggcttgataaatgta
gaagacagatctggaatactaacgcttgataaagattataacaatatagggaaatttctg
aatagaattcttggtatggaagtacatcagcagaatgctttattccagtacttttctgac
acattaaatgcagttattcaaaatgctaaaaagaatggaagatacgatatgggcatctta
gatttgggctctggggatgaaaaagtaaggaaggcagacgttaagaaatttttaactccc
ggatattctacctctggacatgtagaactatacacaatcagtgtagagagaggaatgtct
tgggacgaagcaactaagatctgggcagaacagacgggtccagatgatggattttattta
tcactacagataagaaataacaagaaaaccgctattctagtaaaagaagtgaatcctaaa
aagaagctttttttagtgtacagaccaaatactgggaaacaactcaaactagaaacatgt
gcagacctgaaaaagaaatataagaaggtaccttccgaagatgctctgccacactggtta
gagcagtacaattcttctgcggatacctgcacccatgcttattggagaggcaattgtaag
aaggcaggcttgggattagtttgtgaagtgggactccgctgccgaacttactatgtcctg
tgtggttcagtattgagcgtctggacaaaagtagaaggcgttctagcctctgtgagtggt
acaaatgtgaaaatgcaaatagttcgtctaagaacagaagatgggcagaggatcgtaggt
ttgatcattcctgcaaattgtgtatcgccccttgtaaacctcctgtcaacgtcagaccag
tctcaacagctcgcagtacaacagcagcagatatggcagcagcatcacccgcaaagcatc
accaatttcaacaacgcataa
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