Rissa tridactyla (black-legged kittiwake): 128917023
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Entry
128917023 CDS
T09443
Symbol
TNRC6B
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128917023 (TNRC6B)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128917023 (TNRC6B)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128917023 (TNRC6B)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Gene silencing
piRNA pathway
128917023 (TNRC6B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
128917023
NCBI-ProteinID:
XP_054075470
LinkDB
All DBs
Position
1:163748295..163882300
Genome browser
AA seq
1958 aa
AA seq
DB search
MFFCDKGISVVPDMLFKVSKLLAVTLFWFSAKEKKKAAYSNSLMSNNLLPFENTALQSTS
KTCFLKPFHLIHGKSFNWMLCGELQFHSVATSLTCSFEKRRFLAACARYFWCSSDNTSKL
IPFTKPGEWSREKEQEREEQLMEDKKRKKEDKKKKESAQKVTDQKTKVPEVTKPSLSQPV
AASPIGNSPSPPVNGGNNAKRVAVPNGQPPSAARYMPREVPPRFRCQQDHKVLLKRGQPP
PPSCMLLGGGAGPPPPTAPGANPNNAQPVTGALLQSDSGTATDSAIGGAAASNYANSTWG
PGASSNSGTNANPTHIWDKVIVDGSDMEEWPCIASKDAESSSENTTDNNSASNPGLEKNA
LPGSTTSNKGKGSQCQSGSAGNECNLGAWKSDPKAKSVQSSNPAAESNNGLGNWRNLSGQ
DRIGPSSGFSNFNPNSNPSAWPALVQEGNSRKGTLESDSGSSNAQISTVGQTSREQQSKM
ENAGVNFVSGREQAQIHNTDGPKNGNTNSLNLSSPNPMENKGMPFEMGLGNPSRSTDTPS
QSTGERKTGSVGSWGTARGSSGTDTVSGQSNSGNHGNNGKDREDSWKGASVQKPNGSRSD
SWDNNNRSTGGGSWNFGPQHANESKWGEGNKLTSGVSQGEWKQLSGSDELKIGEWSGPNQ
PNSSTGAWDNQKGHPLPENQGNSQAPCWGRSSSSAGSEVGGQSTGSNHKAGSSDSHNSGR
RSYRPTHPDCQAVLQTLLSRTDLDPRVLSNTGWGQTQIKQDTVWDIEEMPRPEGKSDKGT
EGWESSATQTKNSGGWGDVPSQSNQIKSGWGELSTPTEWKDPKNTGGWNDYKNPNSSNWG
GGRPEEKSSSSWNDSSSKDQGWGGRQPNQGWSSGKNGWGEEVDQTKNSNWESAGNKPVSG
WGEGGQNEIGTWGNGANTSAASKGGWDDCKRTSTWNETGRQPSSWNKQQQQHQQQQQEAS
GSWGPPPQTPSNGRPPNPNWNSGPQPAAPKEEEPSGWEEPSPQSISRKMDIDDGTSAWGD
PSSYNYKNVNLWDKNSQGGQAPREQSLPTPMTSKSQASVWSKSTPPAPDNGTSAWGEPNE
TSPGWGEVDDTGASTTGWGNAPSNAPNAMKSSSKSMQDGWGESDGPVTGTRHSSWEEEEE
GGVWNTAGSQGSSSSHNSTSWGQGGKKTQMKCALKGGSSDSWMNPLSKQFSNMGLLSQTE
DIPGSKMDLSVGGLPDKKFEVDKRAMNLGDFNDMMRKDRSGFRPPNSKDMGTTDSGPYFE
KGGNHGLFGNSTAQSRGMHTPVQPLNPSPNIRAQVPPQFLSPQVSASMLKQFPNSGLNPG
LFNMGPQLSPQQIAMLSQLPQIPQFQLACQLLLQQQQQQQQLLQSQRKLSQAVRQQQEQQ
IARMVSALQQQQQRQPGMKHSPSHPVGPKPHLDSMVPNPLNVGLSDLQTKGQIPGYGSGF
GSSGMDYGMVGGKEAGTESRFKQWTMMEGLPSVASQDANMHKNGAIVPPGKTRGGSPYNQ
FDIIQGDPLGGHAGPAGDSWLPAKSPPTNKIGSKSSNASWPPEILPFKGAVLFSTKINEV
VPNQTDITAGEFQPGVPWKGIQNIDPESDPYVTPGSVLGGTATSPIVDTDHQLLRDNTTG
SNSSLNTSLPSPGAWPYSASDNSFTNVHSTSAKFSDYKSTWSPDPIGHNPTHLSNKMWKN
HISSRNTTGLPRPPPGLTNPKPSSPWNSTASRSVRGWGAQDSRLPSGEKNQLIAPLIRPE
ECTFYSTNGLDEKKLQLSASAWSDGGSVRPSYWLVLHNLTPQIDGSTLRTICMQHGPLLT
FHLNLTQGTALIRYNTKQEAAKAQTALHMCVLGNTTILAEFATDEEVSRFLAQAQPPTPA
ATPSAPTAGWQSLETGQNQTDPVGPALNLFGGSTGLGQWSSGGSGGSSGGDLTGASLWGP
PNYSSSLWGVPSVEDPHRMGSPAPLLPGDLLGGGSDSI
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctgcgataaaggcatatcagttgttccagatatgctatttaaagtaagcaaa
cttcttgctgtgacgctgttttggttttcagccaaagaaaagaaaaaagcagcttactct
aactccttgatgagcaataatcttttgccttttgaaaacactgctttacagagcacttct
aaaacgtgctttctaaagccttttcatttaatacatggcaagagttttaactggatgctg
tgtggagagctgcagtttcattcagttgcaaccagtttaacatgttcctttgaaaagaga
agattccttgctgcttgtgcacgctacttctggtgttcatctgataatacttctaagtta
attccatttacaaaaccgggggaatggtccagagagaaggagcaagaaagggaagaacag
ttaatggaagacaagaaaaggaagaaagaggataagaaaaagaaggaatctgctcagaag
gtcacagatcaaaaaaccaaagtgcccgaagtgacgaaaccaagtttaagccaaccagtg
gctgccagcccaattggcaactctccatcgccaccagtcaatggtggcaacaatgccaaa
agggtggcagtgccgaacggacaaccgccaagcgccgcccgctacatgcctcgggaggtg
ccgccgcgattccgttgccagcaggaccacaaagtgttactgaaacgtgggcagccccct
ccgccatcctgtatgctccttgggggtggagcagggcctcctcccccaacagcaccagga
gcaaacccaaacaacgcacaaccagtgacaggagcactgctgcagagcgacagtgggact
gcaacagattcagcaattggaggtgctgctgcttcaaattatgcaaattccacttggggt
cctggagcctcctccaacagcggcaccaacgccaacccaactcacatctgggacaaggtg
attgtagacgggtctgacatggaagagtggccttgtattgccagcaaagatgctgagtct
tcttccgaaaacaccaccgataacaacagtgcctcgaaccctggcttggagaagaatgct
ctgccaggaagcaccactagtaacaaaggaaaaggaagccagtgccagtctggaagcgct
ggaaacgaatgtaatcttggggcctggaaatctgatcccaaggctaaatctgttcaatct
tccaaccctgctgccgagagtaacaatggactaggtaattggaggaacttgagtggacaa
gacagaattggtcccagttctggcttcagcaactttaacccaaatagcaacccgtctgct
tggccggcactggttcaagagggcaattctaggaaagggactttggaatctgatagtggt
agctccaatgcacagattagcacagtaggtcagacctctagggaacagcagtcaaagatg
gaaaatgcgggtgttaactttgtctctggcagagaacaggctcaaattcataacactgat
ggaccaaaaaatggaaacactaactccttgaacttaagttcaccaaaccctatggagaat
aagggaatgccctttgaaatgggcttggggaacccttccaggagcactgacaccccttca
caaagcactggagaaagaaagactgggagtgttggatcttggggtacagctagggggtct
tctggaactgacacagtctctggacagagcaattctggaaaccatgggaacaatggaaag
gatagagaggactcctggaaaggagcttctgttcaaaaacctaatgggtcaagaagtgat
tcttgggataacaataaccggtctacgggtggtgggtcttggaactttggccctcagcat
gcaaatgaaagcaaatggggtgaagggaacaaattaacatctggggtctctcagggagaa
tggaaacagctgtctgggtctgatgaactgaagattggagaatggagtggtccaaaccaa
ccaaattctagcactggagcatgggacaatcaaaaaggccaccctcttcctgaaaaccaa
ggcaattcccaggctccctgttggggaagatcttccagctctgcaggaagtgaggttgga
ggtcaaagcactggaagcaaccacaaagcaggaagtagtgacagtcacaattctggacgc
cgatcatataggcctacgcatcctgattgccaggcagtcttgcagactttgctgagcagg
actgatttggacccccgagtgctttcaaacaccggctggggccaaactcaaattaagcaa
gataccgtatgggatattgaagagatgccacggcccgaggggaagtctgataaaggaact
gaggggtgggagagctctgccacacagacaaagaactcagggggctggggcgatgtaccc
agccaaagcaatcaaatcaagtctggatggggtgagctctcaaccccaacggagtggaaa
gaccccaaaaatactggaggatggaatgactataagaaccccaattcttctaactgggga
ggaggaagaccagaagaaaaatcatcttcctcttggaatgacagctctagtaaggatcag
gggtggggtggacggcaacctaatcaaggatggtcttctggaaagaacggttggggagag
gaagttgaccaaacaaaaaacagcaactgggaaagtgcaggaaacaagccagtgtctggt
tggggtgaaggtgggcaaaatgagattggaacttggggtaatggtgcaaatacaagcgct
gcttcaaagggtggatgggatgattgtaaaagaacttcaacgtggaatgagacgggtcga
cagcccagctcctggaacaagcagcagcagcagcaccagcagcaacagcaggaggcttct
ggttcctggggtccaccgccccaaactccaagtaatgggcgacctccaaacccaaactgg
aacagtggaccacagccagctgcccccaaagaggaggagcctagtggctgggaagaacct
tctccacagtcaatcagtcgtaaaatggatattgatgatggcacttcagcgtggggagat
cccagcagttacaactacaagaatgtgaacctgtgggacaagaactcacaaggaggacag
gccccacgggagcagagcctgcctactccaatgactagcaaatcacaagcatcagtctgg
agcaaaagcactccacctgctccagataatggtacgtccgcctggggtgagccaaatgaa
accagtcccgggtggggtgaagtagatgatacaggagcatcgacaacaggctgggggaat
gcaccttccaacgccccgaatgccatgaaatctagttctaaatctatgcaagatggctgg
ggagaaagtgatgggccagtgacaggaacgcgtcattccagctgggaagaggaggaggag
ggaggagtctggaacacagcaggctctcagggaagcagttcctcccacaactcaacaagc
tgggggcaaggaggaaagaaaacacaaatgaagtgcgcattaaaaggaggaagtagtgat
tcgtggatgaaccctttatccaaacagttttctaatatgggcttgctaagtcaaactgag
gacattccaggcagtaagatggacttgtctgtaggtggtctcccagataagaagtttgaa
gtagataaacgagccatgaatctcggggattttaatgacatgatgagaaaggatcgatct
gggttccgtccacctaattccaaagacatgggaaccacagatagtgggccttattttgag
aagggtggcaatcatggtttgtttggaaacagcacagcacaatcgaggggcatgcacaca
ccagtgcagccactaaatccttcccccaatatccgggcgcaagtgcctccccaatttctt
tctccccaggtttcagcctccatgctcaaacagtttcccaacagtggcttgaatcctggt
cttttcaatatgggcccccagctttctccacaacagattgccatgctgagccagcttcca
cagattccccagtttcaattagcatgtcagctcctccttcagcagcagcagcagcagcag
cagctgttacaaagccagaggaagttatctcaagctgtgcgacaacagcaggagcaacag
attgctcgtatggtgagtgccctccagcagcagcagcagaggcagcctggcatgaagcat
tcaccgtcccaccctgttgggcctaagccgcatttagacagcatggtacccaatcctttg
aatgtgggtctctcagatttacagaccaaagggcaaatacctggatacggttcaggcttt
ggctcaagtggcatggattatggcatggtgggagggaaagaggctggaacagaatcccgc
tttaagcagtggactatgatggaagggctgccctctgtggcttcacaagatgccaatatg
cacaaaaatggtgcaatagtgccccctggaaagactcgtggaggatcgccctacaaccag
tttgacataattcagggcgacccactaggtggccatgcaggccctgctggtgatagttgg
ttacctgccaaatctccaccaacgaacaagattggaagcaaatccagcaacgccagctgg
cctccagaaattctgccgttcaagggagcagtattgttcagcacaaagataaatgaagtg
gtgcccaatcaaactgatatcacagctggagagttccaaccaggagtgccatggaaaggt
atacaaaacattgaccctgaatctgacccctatgtgacccctggaagtgtgctggggggg
acagccacatctcccattgtagatactgaccaccaacttctgcgggacaacaccacaggg
tctaattcttccctcaacacctcgctgccttcacctggtgcctggccctacagtgcctct
gacaattccttcaccaacgttcatagcacttcagcaaaattcagtgattacaaatcaaca
tggtccccagatcccataggacacaatcccactcatctctccaacaagatgtggaaaaac
catatttcctcaaggaacactacagggctgccccgcccgcctcctggcctgaccaacccc
aaaccatcatctccatggaacagcacagcatcccgatcggtcaggggctggggggcacag
gactcaaggcttccctctggtgagaagaatcaactgatagcaccattgatcagacctgag
gagtgtacgttttacagcactaatggtttggatgaaaaaaagttgcagttgtctgcatct
gcttggagtgatggtggctcagttcgtcctagctactggctggttcttcacaatctcact
ccacagatcgatgggtcaaccttgaggacgatctgcatgcagcatggcccactgctgaca
ttccatctgaacctgacccagggcaccgcccttatccgatataacaccaaacaggaggcg
gccaaggcccagactgcactgcacatgtgtgtgttgggaaacactaccatcctggctgag
tttgccacagatgaagaggttagtcgctttctggcacaagctcagccccctacacctgca
gcaaccccaagtgcacccacagcaggctggcagtccctggagacaggacagaaccagaca
gatccagtcggacctgctttgaatctctttggtgggtcaacagggcttgggcagtggagc
agtggtggcagcggtggcagcagtgggggtgatctcactggcgcttcattgtgggggccc
ccaaactattcttcaagcttgtggggggtcccaagcgtagaggatccacacagaatgggc
agccctgctcccttactacctggagaccttctgggaggagggtcggattctatctga
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