Rissa tridactyla (black-legged kittiwake): 128917042
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Entry
128917042 CDS
T09443
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd00600
Sphingolipid metabolism
rtd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
128917042 (SMPD4)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
128917042 (SMPD4)
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
128917042
NCBI-ProteinID:
XP_054075534
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Position
13:complement(11287083..11305352)
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AA seq
827 aa
AA seq
DB search
MAGPHLQQPSFLLATLKADCVNKPFVQRCHDLERVIEEFPAKELHGIFPWLVESIFGSLD
GIIVGWNLRCLQGKTNPTEYPVALDFLDPSGPMMKLVYKLQAEEYRYDFPVSYLPGPVKA
SIQEQVLPECSLYHNKVQFPSSGGLGLNLALNPFEYYMFYFAISLITQKNSAVTHHVSPS
NSAYFILVDTYLKCFLPTEGSVLPPPYSSPGGAIPSPTPRSPPVPFTSYGMHHTSLLKRH
IAHQPSVNADPASQEIWRSETLLQIFVEMWLHHYSLEMYQKMQSPHVKLEVLHYRLSISS
KHHGSPAQSSYQALHAYQESFKPTEEHVLVVRLLVKHLHAFSNSLKPEPLSPSAHSHTAS
PLEEFKRVVIPRFVQEKLYIFLQHCFGHWPLDASFRAVLEMWLSYLQPWRYAPEKPPQST
ESLPRSVSEKWAAFIQENLLMYTKLFVGFLNRALRTDLVSPKNALMVFRVAKVFAQPNLA
EMILKGEQLFLEPELVIPHRQHRLFMTSTLGGSFFSSWPPAITDASFKVKSHVYSLEGQD
FQYKQMFGTEVRNLVLKLAQLICQAQQTAKSISDHSAETTASQSFFSWFRFTPSEMNGSY
TGNDLDEIGQDSIKKTDEYLEKALEYLCQIFKLNEAQLTQMMMKCGTAQDENGKKQLPDC
IESEDGLILTPLGRYQIINGLRRFEVQYQGDTELQPIRSYENATLVRLLFRLSSALNERF
ADQMDALCSREDFVGRLCRYHLTNPHLIQKIRYSPVVKDRTNQNWGPRISLRFLASYRTL
ISLLMIYFIASWFYIGPIGCTFVILIGYFLYAVIMTFFSEGWKPHEH
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggccggcccgcacctgcagcagcccagcttcctgctggccacgttgaaggcagattgt
gtgaacaaacccttcgttcagaggtgccacgacctggagagggtcattgaggagtttcct
gccaaggaactacatggcatcttcccatggctagtggagagcatttttggtagcctagat
ggcatcatcgtaggctggaatcttcgctgtttgcaaggaaaaacaaatcctactgaatat
cctgtggctttggatttcctggatcccagcggcccaatgatgaagctggtgtacaaactc
caagcagaagagtatagatatgatttcccagtctcatatcttccaggccccgtgaaggct
tcaatacaagagcaagtcttacctgaatgttctttataccacaacaaagtccagtttcct
tcatctggtggtttaggtttgaatttggctcttaatccatttgaatattacatgttctac
tttgcaattagtttgattacacagaagaactcagctgtcacccatcatgtcagcccttcc
aacagtgcttatttcatcttggtggacacgtacctgaagtgtttcctacccacagaagga
agtgtccttcctccaccttattcaagtcctgggggagccatcccttccccaactcccagg
tctccaccagtgcctttcacttcctatggcatgcatcacaccagcttgctgaaacggcac
attgcccatcagccttccgtgaatgctgacccagcttcccaggagatctggagatcagaa
acactgcttcagatctttgttgaaatgtggcttcatcattattcactggaaatgtatcag
aaaatgcagtcccctcatgtcaagctggaggttctccactaccgactcagtatctccagt
aaacaccacggtagtcctgcccaatccagctaccaggccctccacgcataccaagagtca
tttaagcccactgaagagcatgtgctagtggtaaggctgcttgtgaaacatctacatgct
ttcagcaacagcctgaaaccagagcctctctccccttcagcccactcccacacagccagc
ccactagaggagtttaaaagggttgtaattcctcggtttgtccaggagaagctttatatc
tttctgcaacactgttttggtcactggcctctggatgcctctttcagagcagttcttgag
atgtggttaagttacttgcagccttggaggtacgctccggaaaagccaccacaaagtaca
gagtctttacctcgcagcgtatcggagaaatgggctgccttcattcaagaaaacctgctc
atgtatactaagctgtttgtaggatttctgaacagagctcttcgaacagacttggtcagt
ccaaaaaatgctctcatggtgttccgagtagccaaggtctttgctcagcccaatctagct
gaaatgatcctgaaaggagaacagttattcctggagccagaacttgttattccacatcgt
caacaccgactctttatgacctccacacttggcgggagcttcttttcatcatggcctcca
gctattacagatgcctcatttaaagtgaagagtcatgtttacagcctggaaggacaggac
ttccagtataaacagatgtttggcacagaagtcagaaatttggtattaaaactggctcag
ttaatttgtcaggcgcagcagacggcaaaatccatatcagaccattctgcggagacaacg
gctagccagtccttcttttcgtggtttagatttacaccgtcggagatgaatggttcctac
acaggcaatgaccttgatgaaattgggcaagacagcatcaaaaaaacagatgaatattta
gagaaggcactggaatacttgtgccaaatctttaagctgaatgaagcccagctgacccag
atgatgatgaagtgtgggacagctcaagatgagaatggaaaaaaacaacttccagactgc
attgaaagtgaggatggcctcattcttacacccctcggcaggtaccagatcataaatggc
ttacgtagatttgaggtgcagtatcaaggagatactgaacttcagcccatccgaagctac
gaaaatgccactcttgtccgcctcctatttcgtttatcctcagcgcttaacgaaaggttt
gctgatcagatggatgcgctttgctccagggaagattttgttggtagactttgtcgctat
catcttaccaacccccacctcatacagaaaatcaggtatagtcccgtggtgaaggacaga
acaaaccagaactggggaccaagaatcagtctgaggtttctggctagctacaggactctc
atttctttgctaatgatctacttcattgcatcctggttttacattgggccaataggctgc
acattcgttatcctgattggatattttctttatgctgtaataatgacttttttctctgaa
ggatggaaaccacatgaacactga
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