Rissa tridactyla (black-legged kittiwake): 128917080
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Entry
128917080 CDS
T09443
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128917080 (USP30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtd01002
]
128917080 (USP30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128917080 (USP30)
04121 Ubiquitin system [BR:
rtd04121
]
128917080 (USP30)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128917080 (USP30)
Peptidases and inhibitors [BR:
rtd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128917080 (USP30)
Membrane trafficking [BR:
rtd04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
128917080 (USP30)
Ubiquitin system [BR:
rtd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128917080 (USP30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Spt20_SEP
DUF5700
Motif
Other DBs
NCBI-GeneID:
128917080
NCBI-ProteinID:
XP_054075624
LinkDB
All DBs
Position
13:complement(3809529..3823301)
Genome browser
AA seq
509 aa
AA seq
DB search
MLPGGGAAEADGAVRRLLRAGTAARYKVMKNWGVIGGVAAAVAAGMYVLWGPITERKRRR
KGLVPGLLNLGNTCFMNSLLQGLSSCPSFIKWLEEFTAQYKTEQNQSTEHQYLSVTLLHL
LRALSCQEVTEDDVLDASCLLEVLRLYRWQISSFEEQDAHELFHVLTSSLEDERDRQPRV
THLFDVHSLEQPEITQKQISCRTRGSLPPVSNHWKSQHPFHGRLTSNMVCKHCEHQSPVR
YDTFDSLSLSIPAAVWGRPMTLDHCLHHFISSESVKDVVCDNCTKIQAKGILNGQSVENQ
RTTFVKQLKLGKLPQCLCIHLQRLSWSNQGTPLKRHEHVQFNEFLIMDIYKYRIPVHKSS
QNELNQKNTEETTPGTKDGIAVKPSDAEQPSGTKPLFMNGACSSSFLMSSGTFPLAAFPE
CSSPVYLYRLMAVVVHHGDMHSGHFVTYRRSPPSPKNPLSVSSQWLWISDDTVRKASLQE
VLSSSAYLLFYERVHSRVQHQSLELRAEE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccggcggcggcgccgcggaggcggacggggctgtgcggaggttgctgcgggcc
ggaacggcggccaggtataaagtgatgaagaactggggcgtgatcgggggggtggccgct
gccgtggcggcggggatgtacgtgctgtgggggcccatcaccgagaggaagcggcggagg
aaagggcttgtacctggccttcttaacttaggaaacacctgtttcatgaactctttgctg
caaggcttatcttcctgtccctctttcatcaagtggctggaagaatttacagcacaatac
aagacagagcagaaccagtccactgagcatcaatacttgtctgtcactttgctgcatctc
ctaagagctttatcctgccaagaggtaacagaagatgacgtcctggatgcaagctgtctc
ttagaagttttaaggctgtacaggtggcagatctcatcatttgaagagcaggacgctcat
gagctatttcatgtccttacctcttcattagaagatgaacgggatcgtcagccacgtgtg
acacatttgttcgatgtgcattcgctggagcagccagaaataacccaaaagcaaataagc
tgcagaacaagagggtctcttccccctgtgtcaaatcactggaaatctcagcatcctttt
cacggaaggctgaccagcaacatggtttgcaaacactgtgaacaccagagccctgtgagg
tatgatacctttgacagtctctccctgagtattccagcagctgtgtggggccgtcctatg
acgctggaccactgcctccatcatttcatctcctctgaatctgtcaaggatgttgtatgt
gacaactgcactaaaattcaggcaaaagggattctcaatggacagagtgtagaaaaccag
agaacaacatttgttaagcaattaaaattaggaaagcttcctcagtgtttgtgtatccat
ctgcaaagactgagctggtcaaaccaaggcactcctctgaaacgtcacgaacacgtacag
ttcaatgagttcctgatcatggacatatacaaatatcgcattcctgttcataaatcaagc
caaaatgagctgaatcagaaaaacactgaagagacaacacctggcacaaaggatggaata
gcagtaaaaccttcagatgcagaacaaccatctggtactaaaccgctctttatgaatggt
gcctgctcctcttcatttttaatgtcctcaggaacttttccacttgctgcattccctgaa
tgcagttcccctgtatacctttaccgtctgatggcagttgtagttcatcatggagacatg
cattctggacattttgtgacttaccgccgctctccaccttctcctaagaacccactctct
gtcagcagtcagtggctgtggatttctgatgacaccgttcgcaaagctagtttgcaggaa
gtcctttcttctagtgcttacttgcttttttacgagcgtgttcactcgagggtacagcac
caaagcttggagttgagggctgaagagtga
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