Rissa tridactyla (black-legged kittiwake): 128917085
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Entry
128917085 CDS
T09443
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4 isoform X1
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128917085 (PRDM4)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128917085 (PRDM4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf_PR_Knuckle
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-met
PyrI_C
Mu-like_Com
Motif
Other DBs
NCBI-GeneID:
128917085
NCBI-ProteinID:
XP_054075679
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Position
1:complement(160272456..160291503)
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AA seq
800 aa
AA seq
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MHPRMNEMNLSPVGMDQLTSSSVSNALPVSGSHLGLAASPTHNAIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGIPERNYTLPPPPYPHLESSYFRHILPGILSYLADRP
PPQYIHPNTINVDSNPALSVSSNPSALDPYQPSGTVGLEPGIVSMDSRTVNTHGAQNLHP
SDSHEVALDTTIAMESVSRVTSPISTDGMTEELTMDDVAGDHSQIPNGSRRHEPLAVDTV
GSNLTSDAVGHGGVIPIHSSTLELPVVMEPDHIAGRVTGISDSTLNDSIHTVAMSTNSVS
VALSTSHNLASLDSVALHEVGLSLEPVAVSSINQEVAMGPSHVDVSADNLAFVPSSLQME
DSNSNKENMATLFTIWCTLCDKAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLVLRQSI
MGAEAGVWTRETIPVRTCFGPLIGQQSHSLEVADWTDKAASHIWKIYHNGVLEFCIITTD
ENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSRDIPPEHELLFYYSRDYARQLGVPE
HPDVHICHCGKECASYADFKAHLSSHIHNHLPSQGHSSSHGPGHGKERKWKCSMCPQAFI
SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCTLCDKSFTQKAH
LESHMVIHTGEKNLKCDYCEKLFMRRQDLKQHVLTHTQERQIKCPKCDKLFLRTNHLKKH
LNSHEGKRDYVCEKCSKAYLTKYHLTRHLKICKGPTSSLSAPEEEEEEDSEEELIDSMRT
EDCRINHGVYSTGDALSGHK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccagaatgaatgaaatgaacttgagtcctgtagggatggaccagctgacctca
tcctctgtgagcaatgccttgccggtctcggggagtcacttgggattggcagcgtcaccc
actcacaacgccataccagcaccaggcttgcctgttgcaattccaaacttgggcccctcc
ttgagttccttgccctctgctctgtctctgatgctcccaatgggtattggggatcgaggc
gtgatgtgtggtataccagagagaaactacaccctacctccgccaccataccctcacctg
gagagcagctatttcagacacattctacctggtatcttatcttatttggctgacagacct
ccacctcagtacatccatcccaacactataaatgttgatagcaatccagcattgtcagtc
tccagcaatccctcggccctagatccctaccagcccagtgggaccgtggggctggaacca
gggattgtctccatggactcccgcacagtgaacacgcatggtgctcaaaatctgcatcct
agtgacagccacgaggtagcgctggatactacaatcgctatggagagcgtttcgagggta
accagccccatctctacagatgggatgacagaggagcttacgatggatgacgtagctggg
gatcattcgcagatcccaaacggctcccggagacatgaacctttagctgtagacacagtg
gggagtaacttgacgtcggacgctgtaggacacggcggtgtcattcctattcacagtagc
actttggaactccctgtcgtcatggagcctgaccacatcgccgggcgggtgacaggaata
tcggacagcacactaaatgactccattcatactgtggccatgagcaccaactccgtgagt
gtggcgctctctacctcacacaacctagcttccctggactcggtagccttgcacgaagtg
ggcctcagcctcgagccggtggcggtgtcttccataaatcaggaagtagccatggggcca
agtcacgtggatgtgtctgcagacaatcttgcctttgtaccatcctctctgcaaatggaa
gactccaattcgaacaaggagaacatggcaaccttgtttaccatatggtgcacactgtgt
gacaaggcatatccatcagactgcccagatcacgggcccgtcacctttgtccctgacacc
ccgatagagagccgagccaggctttctctccctaagcagcttgtccttcggcagtctatc
atgggagctgaagcaggtgtgtggacacgagaaaccattcctgtaaggacttgttttgga
cctttgatcgggcagcagagccattctctagaggtggccgactggacagacaaagcagct
agtcacatctggaagatctatcacaatggtgtcctggagttctgcatcattacaactgat
gaaaatgaatgtaactggatgatgtttgtacgcaaagccaggaaccgggaagagcagaat
ctggtagcttatcctcatgatggaaaaatttacttttgcacctctcgggacatcccacct
gaacatgagcttctcttttattacagtcgggactatgcacgacagcttggtgtccctgaa
catccggatgtgcacatctgccactgtggaaaggaatgcgcttcctatgcggacttcaag
gcccatttgagcagccatattcacaaccacctccccagccaggggcacagcagcagccat
gggccaggccacggcaaggaaaggaagtggaagtgttccatgtgtccccaggctttcatc
tccccttccaagctccacgtccacttcatgggacacatgggcatgaagccgcacaagtgc
gatttctgtagcaaagctttcagtgatcctagcaacttacggacacacctcaagatacac
acaggtcagaagaattatcgctgtaccctctgcgacaaatcgttcacccagaaggctcat
ctggagtcgcacatggtcatccacacgggggagaagaacctgaagtgcgattactgtgaa
aagctattcatgcggaggcaggacctcaagcagcacgtactcactcacacgcaagaacgg
cagatcaagtgccccaagtgtgacaagctgtttctgaggacaaatcacctgaagaagcat
ctcaattcacatgaaggaaagagggactatgtctgtgaaaaatgctccaaggcttatcta
accaaatatcacctcactcgccacttaaaaatatgtaaaggccccacatccagcctgtca
gccccggaggaggaagaggaggaggattcagaggaagaattaatagactctatgaggact
gaagactgtaggattaaccatggagtctattcaacaggcgacgccctctctggacacaaa
tga
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