KEGG   Rissa tridactyla (black-legged kittiwake): 128917092
Entry
128917092         CDS       T09443                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtd03019]
    128917092 (ATXN2)
Messenger RNA biogenesis [BR:rtd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     128917092 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 128917092
NCBI-ProteinID: XP_054075653
LinkDB
Position
13:4473628..4526083
AA seq 1116 aa
MSLKQTAAAAQAAGNNRKPPGGGGPGLPSAAGGGRQNMGRGRSSGKGPPQPTISFDGIYA
NMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHRKTAESSLGPKREDI
LESILFKSSDFVMVHFKDMDTNYARRVPSETDAFTDSAISAKVNGEHKEKDLEPWDGGET
TATEELEALETDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKREA
RATQLAEEIESSAQYKARVALENDERTEEEKYTAVQRNANEREGHGVNTRENKYIPPGQR
NRDVLSWGSGRQNSPRMGQSGSGPPISRSGSHTSEFSPNSGADQRVVNGGVPWPSPCPSP
SSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSEG
PPRMSPKAQRHPRGHRVSTGRGTISSGLEFVSHNAPGEASTTAVARGSPSGGTWSSVVSG
VPRLSPKTHRPRSPRQSSTPTGPALPSPQPGTIPTESVAMPVPAASPTPASPASNRAVTP
SSEAKDTRLQDQRQNSATGNKENIKPSETSPSFPKPENKGVSPIVSEHRKQIDDLKKFKN
DFRLQSSSSSDAVDQLLNKTREGEKSRDVVKEKTESTPKESIIETGSNTNSNGGSSKPNS
PSISPSISNSSEQKRGPEVTSQGVQTSGPGSKQDKEDKEEKKDTSEQVRKSTLNPNAKEF
NPRSFAQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQPL
YPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYV
AYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAHE
QTHAMYACPKIPYSKETGPSFYFAISTGSLAQQYAHPNATLHPHPPHPQPSATPTGQQQS
QHAGSHPAPSPVQHHQHQAAQALHLANPQQQSAIYHAGLAPTPPSMTPGSNTQSPQNSFP
TAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQA
AIAQSALQPIPVSTTTHFPYMTHPSGEECVPGRPAP
NT seq 3351 nt   +upstreamnt  +downstreamnt
atgtctctcaagcaaacggcagcggcggcgcaggccgccggcaacaaccgcaagcccccc
ggcggcggcggccccggcctcccgtcagccgcgggcggcgggaggcagaacatgggcaga
ggtcgcagcagtggcaaaggaccgcctcagcctacgatttcttttgatggcatctatgca
aacatgagaatggttcacatacttacgtcagttgttggatccaaatgtgaagtacaggtg
aaaaatggtggtatatatgaaggagtttttaaaacctacagtcctaagtgtgatttagtg
cttgatgctgctcatcggaaaactgcagaatccagtttggggccaaaacgcgaagacata
ctagagagtatcttgttcaagtcttcagattttgttatggtgcattttaaggatatggat
accaattatgcgagaagagttccttcagaaacagatgcttttactgattcagccatcagt
gctaaagtaaatggtgaacacaaggagaaggatcttgaaccatgggatggaggagagacc
accgctactgaggagcttgaggcattagagacagatgtttctaatggatgggatcccaat
gacatgtttcgttacaatgaagaaaattatggtgtagtatcaacttatgacagcagttta
tcttcttatacggtgccattagaaagagataattcagaagagtttttaaaacgggaagcc
agagcaactcaattagcagaggaaattgaatcaagtgcccaatacaaagctcgggttgcc
ttggaaaatgatgaaagaacagaagaagaaaaatatactgctgttcagagaaatgctaat
gaacgagaaggacatggtgtgaacactagagaaaataaatacattccacctggacagagg
aatagagatgtcctgtcctggggaagtggaagacaaaactcaccaaggatgggccagtct
ggatcgggcccaccaatttcaaggtctggatcccacacttcagaattcagtcctaactct
ggagcagatcaaagagtagttaacggaggtgttccctggccatcgccttgcccatctcct
tcctctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagcc
acccctacacggccgccctccaggcccccctcgcggccctccaggcccccgtctcacccc
tctgctcatggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaaggg
cctccacggatgtctcctaaggcacaacggcaccctcgaggtcacagagtctctactggt
aggggtacaatttcaagtggcttagaatttgtatctcataatgcaccaggggaagcatct
actactgcagtggcacgaggcagcccttcaggtgggacgtggtcatcagttgtcagtggg
gttccgagattatcccctaaaacacacaggcctaggtctccaaggcagagcagcactccc
acgggaccagctctgccttctcctcagcctggtactattcccactgaatctgttgccatg
cctgttccagctgcctctcctacacctgccagccctgcatccaacagagcagtcacccct
tccagcgaagctaaagatactaggcttcaggaccagaggcaaaattctgcaaccggaaac
aaggagaatataaagccaagtgagacttctcctagttttcccaaacctgaaaacaaaggt
gtatctccaattgtttcagaacatagaaaacagatcgatgatttaaagaaatttaagaat
gactttaggttacagtcaagttcttcttcagatgcagtggatcagctgctaaacaaaacc
cgagaaggtgaaaaatcaagagatgtagttaaagaaaagacagaatcaacccctaaagaa
tctatcatagaaactggcagtaatactaactctaatggtggcagtagcaaacctaatagt
ccaagtatttctccttcaataagtaatagttctgagcaaaagcgagggcctgaggtaact
tcacaaggtgtacagacatctgggcctggaagtaaacaagataaagaggataaagaggag
aagaaagatacttctgagcaagttagaaaatcaacacttaatcctaacgcaaaagagttc
aaccctcgatcttttgctcaaccgaaaccttctactacaccaacctcccctcgtccgcaa
gctcaacccagcccctccatggtgggtcatcagcagccaaccccagtgtacactcagcct
gtttgttttgcaccaaatatgatgtacccggttccagtgagtccaggcgtgcagcctttg
tatcctattcccatgacgcccatgccagtgaaccaagccaagacatatagagcaggtaaa
gtaccaaatatgccgcagcaacggcaagaccaacatcatcagagcaccatgatgcatcct
gcctcagcagcaggccctccaattgtagctacgccacctgcttattcaacacaatatgtt
gcatatagtccccagcagtttcctaatcagcctcttgtgcagcatgtgccacactaccag
tctcagcatcctcatgtttatagccctgtaatacagggcaacgctagaatgatggcacca
ccaacacacgcacagcctggtttagtatcttcttctgcaacacagtatggtgcgcatgaa
cagacgcatgctatgtatgcatgtcccaaaataccatacagcaaggagacaggcccttct
ttctactttgccatttccactggctcacttgctcagcagtatgcccaccctaatgctacc
ctgcatccgcatcctccgcatcctcagccttctgccacaccaactggccagcagcaaagc
caacatgctggaagccaccctgctcctagccccgtgcagcatcatcagcaccaggctgct
caggcactccacctggcaaacccacaacagcagtcggcaatttaccacgcaggtctagct
ccaaccccaccttccatgacgccaggctccaatacgcagtctccacaaaatagttttcct
acagcacaacaaacagtcttcaccattcatccctcccatgttcaacctgcatataccaat
ccgccacacatggcccatgtcccccaggctcatgtacagtcaggaatggttccttctcac
ccaactgcccatgctccaatgatgctaatgacgacacagccacctggtggtccccaagcc
gccatcgctcaaagtgcactacagcccattccagtctcgacaacaacacatttcccctat
atgacgcacccttcaggtgaggagtgtgtgcccgggagacctgcaccgtaa

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