Rissa tridactyla (black-legged kittiwake): 128917169
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Entry
128917169 CDS
T09443
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1
KO
K13885
scavenger receptor class B, member 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03272
Virion - Hepatitis viruses
rtd04145
Phagosome
rtd04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
128917169 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128917169 (SCARB1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
128917169 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128917169 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtd04147
]
128917169 (SCARB1)
Membrane trafficking [BR:
rtd04131
]
Endocytosis
Phagocytosis
Scavenger receptors
128917169 (SCARB1)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128917169 (SCARB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
128917169
NCBI-ProteinID:
XP_054075797
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Position
13:complement(6601560..6623249)
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AA seq
504 aa
AA seq
DB search
MAAARRRLSVGLGLAGAACALLGVCLLLVGPVIIKEQVVKNVRIDPSSISFSMWKDIPVP
FYMSVYLFEVLNPKETLQGAKPVLNQRGPYVYREFRYKTNITFHDNDTVSFLEYRQLFFQ
PDMSNGSEEEYIIVPNILMMGAAVMMENLPNFVKLLLSGALAGLKQEAFMNRTVREFLWG
YEDPLLDTINAIVPGLIPFKGKFGLFVELNNSNSGLFTVYTGMKNISRVHMVDSWNGQKK
VNYWRSSECNMINGTTGEMWPPFMSPTSLEFFSPDACRSMTLVYEQSGKFKGVPTYRFVA
PKTLFANGTDYPPNEGFCPCMQSGIQNVSTCRLKAPMFISHPHFYNADPALVDAVEGLHP
SKDQHALFLDVHPMTGIPMNCSIKLQLNQYIKRVSGIIQTGKIKPVVLPLLWFAESGSIE
GAVLKQFYTNLVLIPSLLDYLQYIFLGLSVPLVISAAVLMARSQGTATEKSPRHPTMQSK
PPPSSETTPLLHDTVTQSQDDAEA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcccggcgcaggctgtcggtgggtctggggctggccggggcggcctgcgcc
ctcctgggggtctgcctgctgctggtggggcctgtcatcatcaaggagcaggtcgtcaag
aacgtcaggatcgaccccagcagcatctccttcagcatgtggaaagacattcctgttcct
ttctacatgtcggtgtacctcttcgaagtgctgaaccccaaggagaccctccagggagca
aagccggtgctgaaccagcgtggaccctacgtttacagagagttcaggtataaaacaaat
atcacattccatgacaatgacactgtctccttcctggagtaccgccaacttttcttccag
ccggacatgtccaatggcagtgaagaagagtacatcattgtgccaaacattttgatgatg
ggagcggctgtaatgatggaaaacctgccaaacttcgtgaagcttttactgagtggagcc
ctggctggcctgaaacaggaggcgttcatgaaccggacagtgagggaattcctgtggggg
tatgaagaccctcttctagacacaataaatgcgattgttcctggcctgatccctttcaag
ggaaaatttggcttatttgtagagcttaacaactccaattcgggactgtttacagtgtac
acgggcatgaagaacatcagtagagttcacatggtggattcatggaatggacagaagaag
gtgaactactggcggagcagcgagtgcaacatgatcaacgggaccacgggggagatgtgg
ccaccgttcatgtccccaacgtcactggagttcttcagccctgatgcctgcagatccatg
acactggtgtatgagcagtccgggaagttcaagggtgtgcccacctaccgcttcgtggca
ccaaaaactctctttgccaacggcacagactatccacccaatgaaggcttctgcccctgc
atgcagtccggcatccagaacgtcagtacctgtaggctcaaagcaccaatgttcatttcc
catcctcacttctacaatgctgacccagccctggtggatgccgtcgaaggccttcacccc
agcaaggaccagcacgcgctcttcctggacgtgcacccgatgacgggcatccccatgaac
tgctccatcaagctccagctgaaccagtacataaaacgtgtgtctggtataattcaaaca
gggaagattaagccagtggtcctgccgctgctgtggtttgcagagagcggatccatcgaa
ggcgcagtcctgaagcagttttacaccaacctggtgctgatcccgtccctgctggactac
ctgcagtatatcttccttgggctgagtgtcccgctcgttatctcagcagctgtgctcatg
gcaaggagtcagggaaccgccaccgagaagagcccacgccatcccaccatgcagagcaaa
ccgcccccctcctccgagaccacgccgctcctacatgacactgtcacacagagccaggac
gacgccgaagcctga
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