Rissa tridactyla (black-legged kittiwake): 128917189
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Entry
128917189 CDS
T09443
Symbol
CLTCL1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04142
Lysosome
rtd04144
Endocytosis
rtd05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128917189 (CLTCL1)
04142 Lysosome
128917189 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
128917189 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128917189 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtd04147
]
128917189 (CLTCL1)
Membrane trafficking [BR:
rtd04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
128917189 (CLTCL1)
Exosome [BR:
rtd04147
]
Exosomal proteins
Proteins found in most exosomes
128917189 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
capSnatchArena
Motif
Other DBs
NCBI-GeneID:
128917189
NCBI-ProteinID:
XP_054075828
LinkDB
All DBs
Position
13:complement(217583..254260)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHFQLQNLGINPGNIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTT
PIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMAEEVIFWKWISVNTVA
LVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGN
QPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHMYDLESGACIYMNRISA
DTIFVTAPHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATSVLQNPDLGLRMAIRSNLAGA
EELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVNPEQGLQFSQMLVQDE
EPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRSRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKDLVKEAIDSYIKADDPSAYMEV
VQAANRNDNWEDLVKFLQMARKKARESYVETELIFALAKTNRLSELEEFISGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFAC
VDGKEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVSFFS
KVNQLLLVKPYLRSVQNHNNKGVNEALNDLLTEEEDYQGLRASIDAYDNFDNITLAQRLE
KHELIEFRRIAAYLYKGNNRWKQSVELCKKDRLYKDAMQYAAESKDAELAEKLLQWFLEE
GKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDGLFYKVDKL
DASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgcccattcgcttccaggagcatttccagctccaaaatttgggcatt
aacccaggaaacattggattcagtaccctaacaatggaatctgacaagttcatctgcatc
agggagaaagtgggagagcaagcacaagtagtgataattgacatgagtgatccaacaaca
cccataagacgtccaatttctgccgaaagtgccatcatgaatccagcctctaaagtaatt
gcgctaaaagctgggaaaacacttcagatctttaacattgagatgaaaagtaaaatgaaa
gcccacacaatggcagaggaagtgatcttctggaaatggatatctgtgaatacagttgcc
ttggtgacagagacagcagtctaccactggagcatggagggagaatcacaaccccaaaag
atgtttgacaggcatgctagtcttgcgggctgccaaatcatcaattacagaacagatgaa
caccaaaaatggctgctgctgataggaatttcagcacagcaaaatcgtgtggttggtgca
atgcagctgtactcagttgatagaaaagtctcccaacctatagaaggccatgcagcagct
tttgcagaattcaaaatagagggaaatgccaaaccttctacgctgttctgttttgctgtg
aggagtcctgcagggggcaagctacacataattgaagtaggtcagccagccactggaaat
cagccatttgttaaaaaagctgttgatgtgtttttcccgcctgaggcacagacagacttt
cctgtggcaatgcagattggaattaagcatggtgttatctacctgatcacgaagtatgga
tatattcacatgtatgacttggagtccggagcatgcatctacatgaaccgtattagtgct
gatactatctttgtcacagctcctcacgaacctacctcgggcattattggtgtgaacaaa
aaaggacaggtgctttctgtatgtgttgaggaagacaacatagtgaactatgctacgagt
gttctccagaatcctgacttgggactgcgtatggctatacgtagtaatctagctggggca
gaggaattatttgccagaaagttcaacacgctgtttgctcaaggaagctacgcagatgct
gccaaagtagctgcatctgcaccaaagggaatcctacgtaccagtgatacaatcaggaag
ttccagagtgtaccagctcagcctgggcaggcctctcccctgctgcagtactttggaata
ttgcttgaccagggacagctgaacaagtttgagtctctggagctctgtcgccctgtccta
cagcagggccgcaagcagcttctggaaaagtggctgaaggaagacaagctggagtgctcg
gaggagctgggagacttggtgaagacagctgacccaacccttgcactcagtgtctatctt
cgtgctaatgtgccaaacaaagtgattcagtgctttgctgaaactggtcaattccagaaa
atagtgctgtatgctaaaaaggttggctataccccagactggatcttcctgttgagaagt
gtgatgagagtcaatccagagcaaggcctgcagttctctcagatgctcgtacaggatgag
gagccactggctaacattaaccagattgtggatgtgttcatggagaacagtcttattcag
cagtgcacgtcttttctgttggatgccctgaaaaataaccgccccgcagaaggccacctt
cagactcgtctcctggaaatgaatttgattcatgccccacaggttgcagatgccattctt
ggaaaccaaatgtttacacactatgatcgtgctcatattgcccagttgtgtgaaaaggca
ggcttgctccagcgagctttggaacactacacagatctctatgatattaaacgtgctgtc
gttcatactcacctcttgaatcctgagtggcttgtgaatttctttggctctctctcagtt
gaagactctgtggagtgtttgcgtgccatgctgtcagccaacattaggcaaaacctacag
ctctgtgtgcaagttgcttctaaataccatgagcagcttggtacccagtctcttgtggag
ctttttgaatctttcaaaagctatgaaggactgttctatttcttgggttccattgtaaac
ttcagccaggatccagacgttcacttcaagtacatccaggcagcttgcaagactggtcag
ataaaggaagtggaaagaatctgccgtgaaagtaactgctataacccagaacgggtgaag
aactttctgaaggaggcgaagctcacagaccagcttcccctgatcattgtctgtgatcgt
tttgactttgttcatgacctggtgctctacttatatcgcaataacctgcaaaagtatatc
gagatctatgtacagaaggtgaatcctagccgtataccagcagtggttggagggcttctt
gatgtggattgttctgaagatgtcattaagaacttgatcatggtggttagaggccagttc
tcaacagatgagctggtggctgaagtggaaaaaagaaatcggcttaagttgctgttgcca
tggcttgaatcaaggattcatgaaggctgtgaagaacctgcgactcataatgccttggcc
aaaatctacattgacagtaataataatccagagcggttccttcgtgagaatccttactat
gacagccgtgtagttggcaaatattgtgaaaagagggaccctcatctggcctgcgttgct
tatgagagggggcaatgtgatctggaactcataaaggtctgcaatgagaactcgctgttt
aagagtgaggctcgctatctagtgcgcaggaaggaccctgagctctgggcaaatgttctg
gaagaaaacaacccattcaggcggcagcttattgaccaggttgtccaaacagctttatca
gagacgcaggatccagaggaggtttctgtaactgtgaaagctttcatgactgctgacctg
cctaatgaattgattgagttattggaaaaaattgtgttggataactctgtattcagtgaa
cacaggaatctccagaatctgctgatcctgactgccattaaggctgaccgcagtcgtgtg
atggaatacatcaaccggctggataactatgatgccccagatattgcaaacattgccatc
agtaatgagctatatgaagaagcttttgctatattcagaaaatttgatgttaatacttca
gcaattcaggtgctgattgagcacattggcaacttagaccgtgcgtatgaatttgcagag
aggtgtaacgaaccagcagtatggagtcagctagccagagcacagctccagaaggacttg
gtgaaagaagctattgactcctatataaaggcagatgatccatctgcttacatggaagtt
gttcaagcagctaatagaaatgataactgggaggacctagtcaagttcttgcagatggcc
aggaagaaggctagagagtcttatgtagagacagaacttatttttgctttggcaaaaact
aatcgtctgtcagaactggaggagtttattagtggccctaataatgcccatatacaacag
gttggtgatcgctgttatgaagaggggatgtacgaagcagcgaaactactgtataacaat
gtatctaattttgctcgcctggcttctaccttggtgcaccttggagagtatcaggcagca
gtggacagtggccgcaaagccaacagcacgaggacttggaaggaggtatgctttgcctgt
gtggatggaaaggaattccgcttggcacagatctgtggcttacacatagtcatccatgct
gatgaacttgaagagctgatcagttactatcaggatcgtggctactttgaagaactgatt
gcccttttggaagctgctttgggcctagagcgtgctcacatgggaatgtttaccgaactt
gccatcttatactccaaattcaagcctcagaaaatgagggaacatctggagctcttctgg
tccagagttaatattccaaaggtgctcagagctgcagaacaggctcatctctgggcagaa
cttgtattcctctatgacaagtatgaggagtatgacaatgcaataattactatgatgaat
catcccactgatgcctggaaagaagggcagtttaaagacataattgccaaggtggccaat
gtggagctgtactacaaagccttgcagttctacttagactacaaacctctactgataaat
gatctcctgcttgtattatctccacgactagatcacaccaggacagtcagttttttctca
aaggttaatcagctgcttctagtaaagccttatctgcgttcagtccagaaccacaacaac
aaaggagttaatgaagctctaaatgaccttttaacagaggaggaagattaccagggtttg
agagcttccatcgatgcctatgacaactttgataatataacgttggctcagcgtctggaa
aagcatgaactaattgaatttaggcgtattgcagcatacttgtataagggtaacaaccgc
tggaaacagagtgtggaactatgcaagaaagaccgtctgtataaggatgctatgcagtac
gctgcagaatccaaagatgcagagctagctgagaagttgcttcagtggttcctggaagaa
ggcaagcaggagtgctttgcagcctgccttttcacatgttatgacttgctgcacccagat
gtagtgcttgagttggcctggaggcataacatcatggactttgcaatgccttatttcatc
caagtgatgagagagtaccttaccaaagttgatgggctgttctataaggtggataaactt
gatgcttctgaaagcctaagaaaagaagaggaacaagtaactgaacccactccaatagta
tttggccagcagttgatgttaacagcaggccccagtgcagtacctccccaggcaaacttc
ccatacggatacacagcaccaggattcacccagccgcctgtttacggtttcaatatgtaa
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integrated database retrieval system
