Rissa tridactyla (black-legged kittiwake): 128917215
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Entry
128917215 CDS
T09443
Symbol
UFD1
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1 isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128917215 (UFD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtd03009
]
128917215 (UFD1)
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
128917215 (UFD1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
128917215
NCBI-ProteinID:
XP_054075875
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Position
13:complement(971748..978405)
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AA seq
307 aa
AA seq
DB search
MFSFNMFDHPIPRVFQNRFSTQYRCFSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERSAQHEETADVEADHSGYMSDIGFRAFSGSGNRLDGKKK
GVEPSPSPIKPGDIRRGIPNYDFKIGRITFIRNSRPLVKKVEEDDSGSRFIAFSGEGQSL
RKKGRKP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgttctccttcaacatgttcgatcaccccatcccgcgggtgttccagaaccgcttctct
acccagtaccgctgcttctcggtgtccatgctggccgggcctaatgacaggtcagatgtg
gagaaaggcgggaagataattatgccaccgtcagctttggatcaactcagccgacttaat
attacttacccgatgctgtttaagctgaccaataaaaattcagaccgaatgacacactgt
ggagtgctggaatttgtggctgatgagggcatctgttaccttccacactggatgatgcag
aacttgctgctggaagagggaggcctggtgcaagtggagagtgttaatcttcaagttgct
acttactcaaaatttcagccacagagtccagattttcttgacatcaccaatcccaaagct
gtattagaaaatgcattgagaaactttgcttgtctaactacaggggatgttattgccatc
aactacaatgaaaagatctatgagcttcgggtaatggagaccaaaccggataaggctgtg
tccatcatagaatgcgatatgaacgtggattttgatgctcctttggggtacaaagaacca
gaaagaagtgcacaacacgaggagaccgcggatgtggaggcagaccatagtgggtacatg
agtgacatcggatttcgtgcattctctggttctgggaacagattggatggcaagaagaaa
ggtgttgagcctagtccatcaccgattaaaccaggagacattcgaagaggaatacccaac
tatgacttcaagatcggtagaatcacgttcattagaaactcgcgtccgctagttaagaaa
gtcgaagaggatgactctggaagccggtttattgccttttcgggagaaggccagtctctg
cgcaaaaagggaagaaaaccttaa
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