Rissa tridactyla (black-legged kittiwake): 128917394
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Entry
128917394 CDS
T09443
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128917394 (GAPVD1)
Membrane trafficking [BR:
rtd04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
128917394 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
DUF5996
Motif
Other DBs
NCBI-GeneID:
128917394
NCBI-ProteinID:
XP_054076319
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All DBs
Position
14:5387778..5417577
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AA seq
1461 aa
AA seq
DB search
MVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYRTAWISKQQRINLDRLII
TSAEASPAECCQHAKVLEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKL
NQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSI
LFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDPNKLIERFSPVQQEKLFGEKGT
EKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVG
EVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGD
PRMKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSSVNLLEGLSRTVVYMTYSQLTSLVGF
MRNVMSSDQLKEDRMALENLLANLPQNRPGKSSSLEMTPYNTPQLSPATTPANKKNRLPI
ATRSRSRSNILMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQL
ADGGQGDVPVDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELG
AGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVL
GSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVL
PSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPN
KIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAV
VRPKVHYARPSHPPPDPPILEGAMGGNEARLPNFGSHALIPTDLEAFKQRHSYPERLVRS
RSSDIVSSVRRPMSDPGWNRRPGNEERELPMPTTSAGAAVLVAASQSSSSSPSKDSSRGE
IEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDMVPDRYATLQDDPS
PRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVNYDGAEAMGDGESMHDSPRDEALQNMSA
DDLPDSASQVAQPQSSAFSYRDAKKKLRLALCSADSVAFPMLTHSTRNGLPDHTDPEDNE
IVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYL
TRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTA
ADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGD
ILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCI
LRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEE
SYWWMQFTAAVEFIKTIDDRK
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctggatatacacacgctggcacatcacctcaagcaggaacggctgtatgta
aactcagaaaagcaacttattcaaaggctcaatgcagatgtattgaagacagctgaaaag
ctgtaccgcacagcatggatttccaagcagcaaaggattaacttggacagactgatcata
acaagtgccgaagcttctcctgctgaatgttgccagcatgctaaagtcttggaggacacg
cagtttgtggatggttataagcagttgggatttcaggagactgcttatggagaattccta
aacagattgagggagaaccctaggcttattgcatcttgcctggttgccggagagaagctc
aaccaggacaacactcagagtgtcattcacacagtctttacatccatttatggcaattgc
atcatgcaggaggatgagagctacctcctccaggtcctccgttacttgatagaatttgaa
ctcaaagaaagcgacaacccaaggcggctgctgagacgaggcacctgtgccttcagcatc
ttattcaaacttttctctgaaggactcttttctgcaaaactttttcttactgcaacttta
cacgagccaatcatgcagcttctggttgaagatgaagaccacctggaaactgatcccaac
aagttaattgagagattctctccagtgcaacaggaaaagttatttggagagaaaggcaca
gaaaagttcaagcaaagagtccaagagatggttgactccaatgaggccaaactggtgacc
ctggtgaacaaattcattggctatctcaaacaaaacacttactgttttcctcacagcttg
aggtggattgtgtcacaaatgtacaaaacgctctcgtgtgtagacaggctggaggttggg
gaggtcagagcgatgtgcacagatcttcttctagcgtgtttcatctgtcctgcaatcgtt
aacccagaacagtatggaatcatttctgatgctcctataaatgaggtggcaagatttaat
ctgatgcaggttgggagacttctgcagcaattggcgatgacaggttctgaagagggagat
ccacggatgaagagcaaccttgctaaatttgacaaaagctgtgtggctgctttcctggat
gtagttattgatgggcgtgcggttgaaactcctccaatgtcttctgttaaccttctggag
ggcttgagtagaacagtggtttacatgacatacagccagctaactagtctggttggcttt
atgcggaatgtaatgtcaagcgatcagcttaaggaagatcggatggctttggaaaacttg
ctggcaaacctaccccagaacagaccagggaaaagcagcagccttgaaatgactccctat
aatactccacaactttcccctgcaactactccagctaacaaaaaaaatcgattgccaata
gcaactcgtagcagaagcagatcaaatattctaatggatcagcatggagatcatgaggga
tcctcccaggagactatcccagaggttcagccggaagaagtgctggtgatttctttgggg
acaggtccacagattactccaggaatgatgtcagaaaatgaggtcttaaatatgcagctt
gcagatggcggacaaggagatgtccctgttgatgaaaacaaactccatggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttca
aatcgctccaactctgtgtcatctttggatttagaaggggagtctgtgtcggagcttggc
gcaggcccctccgggagcaacggcgtcgaagctctgcagctgttagagcatgaacaagcc
acaactcaggataatcttgatgacaagctccgtaaatttgaaatccgggatatgatgggg
ttgactgatgacagagatatatcagaaactgtgagcgaaacttggagtacagatgtcttg
ggaagcgactttgatccaaatattgatgaagatcgtttgcaagaaatagcaggtgcggct
gcagagaacatgctaggcagcttgctgtgtttaccaggttcaggatccgtgttgcttgat
ccctgcacaggttcaaccatatcagaaaccacaagcgaggcgtggagcgtggaagtatta
ccaagtgattcagaggccccagacttaaaacaagaggaaagactccaagaactggaaagc
tgttcagggctgggtagcacatctgatgacacagatgtaagggaggtcagttcccgaccc
agtacgccaggcctcagcgttgtatcaggtattagtgcaacatctgaagatattcctaat
aagattgaggatctgaggtctgaatgtagctctgattttgggggaaaagattctgtgaca
agtcctgacatggatgaaacggcccatggagccagtcagttgacatctcctccttctcag
acagattctttgcttgcattgtttgaccctctgtcctcaaatgagggtgtatcagctgta
gtaaggcccaaagtacactatgcaagaccctcccatccaccaccggatccaccgatcttg
gaaggagctatgggaggtaatgaggcccgattgccaaactttgggtctcacgctttaatt
ccaactgatttagaagcattcaagcagaggcattcttatccagagaggctagtccgcagc
aggagttcagatatagtatcatcagtccggagacctatgagtgatcctggctggaacagg
cgtcctggtaatgaggagagggagcttcctatgccaaccaccagcgctggagcagccgtt
ctcgtggccgcatctcagtcatcgtcttcatctcccagtaaagactcctctaggggagag
attgaggagcgaaaagacagtgatgatgagaagtctgacagaaacaagccctggtggagg
aaacgttttgtgtctgctatgcccaaagctcctattccatttagaaagaaagaaaaacaa
gaaaaagacaaagatgatatggtgcctgacagatatgcaacacttcaagatgatcccagc
ccaaggctcagtgcgcaggcgcaagctgcggaggacattctggacaaatacaggaatgca
attaagcgaaccagtcctagtgaaggagccatagtaaactatgacggtgcagaggctatg
ggggatggtgagagtatgcacgactctccacgtgatgaggctttgcaaaacatgtctgca
gatgatctcccagactctgcaagtcaagtagcacagccacaaagttctgctttctcctat
agggatgcaaagaagaaattgagattggctctttgttcagcagattctgtggccttcccc
atgttgacacattcaacaaggaatggcctaccagatcacacagacccggaagataatgaa
attgtgtgcttcttgaaagttcagctagctgaagctattaacctccaagacaagaacttg
atggcccagctgcaagagacaatgcgatgcgtaagccgctttgataacaggacctgtcga
aagctgctggcatctattgcagaggactataggaaaagagctccatatattgcttattta
actcgatgtcgccaaggcctacaaacgacacaagcgcacttggaaaggctgctgcaaaga
gttctgcgagataaagaagtggccaacagatacttcacgacagtatgtgtgaggttactg
ctagagagcaaagaaaagaaaataagggagtttattcaagatttccagaaactcacagca
gcagatgataaaacagctcaagttgaggattttcttcagtttttatatggggctatggct
caggatgccatatggcagaatgccagtgaagaacagcttcaggatgcacaattagctata
gaacgcagcgtgatgaatcgtattttcaaactcgcattctaccctaatcaggatggagat
attttgcgtgaccaggtccttcatgagcacatacagaggttatctaaagtagtgactgca
aaccacaaagcgcttcagatacctgaggtatatctccgggaggcaccatggccatctgca
cagtctgaaatccgcacaataagcgcttataaaacccctcgagacaaagtacagtgtatc
ctgcgaatgtgttcaaccatcatgaacctgcttagtttggcaaatgaagattcagtaccc
ggggcagatgattttgttcctgttctggtctttgtccttataaaggcaaatccaccttgc
ttgctgtccactgttcagtacattagtagtttctatgccaactgtttatctggagaagaa
tcgtactggtggatgcagttcacagcagcagttgaattcattaaaactattgatgatcgc
aagtaa
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