Rissa tridactyla (black-legged kittiwake): 128917418
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Entry
128917418 CDS
T09443
Symbol
RABGAP1
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128917418 (RABGAP1)
Membrane trafficking [BR:
rtd04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
128917418 (RABGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
Peptidase_M78
Motif
Other DBs
NCBI-GeneID:
128917418
NCBI-ProteinID:
XP_054076403
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All DBs
Position
14:4418334..4492608
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AA seq
1081 aa
AA seq
DB search
MDDKASVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQL
QRELEDVLMDPPMEDQSSDRDHGEEVRTDGDGEEPVVLEASASSTINPVSVAGLQKPDMS
LPVKPSQGDCEDLSPFTPVTDEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRSQCQI
SLDVTLSVPNVSEGTVRLLDPQTNTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNA
ELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSAIATPQTPDSDIFTFSVSLEIKE
DDGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGLLLSRGKDVRSG
DMHLLDLESMGKSSDGKSYVITGSWNQKSPHFQFVNEETPKDKVLFMTTAVDLVITEVQE
PVRFILETKVRVCSPNERLFWPFSKRSSTENFFLKLKQIKQKDRKNNSDTLYEVVCLESE
SERERRKTTASPSLRLPQSGSQGSMIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILET
WGELLSKWHLNLSVRPKTLSALVRSGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKES
PQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLL
HMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQEYIPDLYNHFLDISLEA
HMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTTKDDLLLTDFEGAL
KFFRVQLPKRYRSEENAKKLMELACNMKISQKKLKKYEKEYHTMREQQAQQEDPIERFER
ENRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNVRHVFMLTSGDKAEEKADALNKEL
LMTKQKLIDAEEEKRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERL
EKQQTANKAEIEKIRQKVDDCEHCREFFNKEGRVKVASSAKDGSDEDTDEEKETLKNQLR
EMELELAQTKLQLVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTISSIKTVTGVQGKET
C
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggcttctgttggaaaaatcagtgtctcttcagactcggtatccactctt
aacagtgaagattttgtcttggtttccaggcaaggggatgaaacaccatctacaaataat
ggtagtgatgatgaaaaaacaggactgaagattgtggggaatggaagcgaacagcagctg
cagagggaacttgaagacgtgctgatggacccacccatggaagatcagtcaagtgaccgg
gaccatggagaagaagttaggactgatggagatggggaagaacccgttgttcttgaagct
tcagcatcctccaccattaatccagtgtcggtggcaggactccagaaaccagacatgagt
ttgcctgtgaaaccatcccagggagactgtgaggatttgagccctttcacacctgtgacg
gatgaggacagcgtggtgttcagcaagcttacctacttaggctgcgcctctgtgaacgct
ccccggagtgaagtggaagccctcagaatgatgtccatcttacgaagccagtgccagatt
tctttagatgtgacactgtcagtgcctaatgtctctgaaggaacagtgagacttttagat
cctcagacaaatacagaaatagcaaattatccaatctataaaatccttttctgtgtacga
gggcatgatggaacccctgaaagtgattgctttgctttcactgaaagccactacaatgca
gaactcttcaggattcatgtcttccgatgtgaaatccaagaggctgtgagccgaatactg
tacagctttgccactgccttccgtcgttctgccaaacaaactccactctcagccattgcc
accccacaaactccagacagtgatattttcaccttctctgtgtcactggaaatcaaagaa
gatgatgggaagggttatttcagcgcagttcccaaagacaaggacagacaatgctttaaa
ctccgccaaggaattgataagaagatagtgatttacgtccaacagacaactaataaagaa
cttgctattgagagatgttttggccttctccttagccgtgggaaagatgttcggagtggc
gacatgcaccttttagatttggagtccatgggtaaaagttctgatgggaaatcatacgtg
atcactgggagctggaatcaaaaatctccacacttccaatttgtaaatgaagaaacacca
aaagataaagtattgttcatgacgaccgcggtggatttggtgataactgaggttcaggaa
cctgttcgattcattctggagactaaagtcagagtttgttcacctaacgagagattgttc
tggcccttcagcaaacgtagctctactgaaaactttttcctaaaattgaaacagataaag
caaaaggacagaaagaataactcggacacgttatatgaagttgtgtgcctagaaagtgaa
tcggagagggagagaagaaaaacaacagcaagtccttctcttcgtctgccccagtctggg
tcacagggctcgatgattccttctcctcccgaggatgatgaagaagaagacaatgatgaa
ccgctcttaagtggttctggagatgtttccaaagagtgtgcagaaaaaattcttgagaca
tggggagagctgctgtccaaatggcacctcaatttgagcgtgaggccaaagacgttgtca
gcgttggtgagaagtggtgtccctgaggccctcagaggagaagtgtggcagttgctggca
gggtgtcataataacgatcacctggtggagaagtaccgaattctcatcacaaaggagtct
ccgcaagacagtgctatcacccgagacatcaatcgaacgttccctgctcatgattatttt
aaagatactgggggagatggccaggactccttgtacaaaatatgcaaggcctactctgtc
tatgatgaagagattggctactgtcaaggccaatcatttcttgctgctgtgctgcttctg
catatgcccgaggagcaagctttcagtgttctggtcaaaatcatgtttgattacggactc
agggaacttttcaaacaaaactttgaagatttgcactgcaagttctatcagctggagcgc
ctcatgcaggaatacattcctgatctgtataaccactttctggacatcagccttgaagcg
cacatgtatgcttcccagtggttccttaccctgttcactgcaaaattccctctctacatg
gtcttccatattattgacttactcttatgtgagggaataagtgttatctttaatgttgca
ctgggattattaaaaactaccaaggatgatttgttactgactgactttgaaggggcatta
aaattcttccgtgtacagctgcccaagagatatcgctcagaagaaaatgcaaaaaagctg
atggaattagcatgtaatatgaagattagccagaagaagctgaagaaatatgaaaaggag
tatcataccatgagagagcagcaagctcaacaggaggatcctatagaaagatttgagcgt
gagaaccggcgcctacaagaagcgaacatgaggcttgagcaagaaaacgatgatcttgcg
cacgaactggtgaccagcaagattgctctgcgaaaagatttggacaacgtaagacatgtc
tttatgctgactagtggagacaaggcggaggaaaaggcagatgctctgaataaggaactg
ctaatgaccaaacagaagctgattgatgcagaagaagaaaagaggcgcctagaagaagaa
tcagctcagctgaaggaaatgtgtcgtagggaactagataaggcagagtcggagatcaaa
aagaacagctctattattggtgactacaaacagatttgttcccagctgagtgagcgactg
gaaaagcaacaaacagcaaataaagctgaaattgagaaaatacggcaaaaagtggatgac
tgtgagcattgccgggagttcttcaataaagaaggccgtgtgaaggttgctagttctgcc
aaggacggttcagatgaggacacagatgaggagaaggaaacgctgaaaaaccagctgagg
gaaatggagcttgagctggcccagaccaagttgcagcttgtggaggcggaatgtaaaata
caggatttggagcaccatttgggtctggcattgaatgaagtacaagctgcaaagaaaaca
tggttcaacagaacaataagctctataaaaacagtgactggagtccaaggaaaagagact
tgttga
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