Rissa tridactyla (black-legged kittiwake): 128917438
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Entry
128917438 CDS
T09443
Symbol
DDX31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtd01009
]
128917438 (DDX31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtd03009
]
128917438 (DDX31)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128917438 (DDX31)
Protein phosphatases and associated proteins [BR:
rtd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128917438 (DDX31)
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
Pre-60S particles
Helicases
128917438 (DDX31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Helicase_C_2
FF
DUF7208
Motif
Other DBs
NCBI-GeneID:
128917438
NCBI-ProteinID:
XP_054076503
LinkDB
All DBs
Position
14:complement(1351135..1401285)
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AA seq
715 aa
AA seq
DB search
MAAAGTLLLNLSSAPRGRGPGAPSRSSALKRKLQSPHGNPPLKRKRKPSINTFKKCAPEA
DIREKGSSSQKSLPKKQLTDNRNESQKTKPFIKTSSLFRNNPDIPEIHRKAVQQVQENVF
TTDCFSQLDLHPHLISTINNVLKISSMTSVQKQTIPVLLQGKDALVRSQTGSGKTLAYGI
PLVQSLQGMESKIQRSDGPYALILVPTRELALQSFDTMQKLLKPFAWIVPGVLMGGEKRK
SEKARLRKGINILISTPGRLVDHIKSTECIHFRRTQWLIIDEADRILDLGFEKDVAVILN
ALNTERERHQNVLLSATLTEGVTRLADISLNDPVSISIADEIQKGIKPASQMDTEPNNSS
NCMGQENFAVPEKLKQYVMMVPSKLRLVTLAAFILEKCKFEKHHKMIIFFSSCEQVEFYY
ELLLKVLSGGLESEQPERSSVSSACLRFLRLHGNMEQEERTEVFQEFLKSKTGILLCTDV
AARGLDLPQVTWIVQYNAPASPAEYIHRIGRTARIGCHGNSLLVLAPSEAEYVSLLASHK
INVSEIKMEKVLSSLMKDDRFKLHRPRSKKSCGTDPQEVRERATILQTKFENYVHSNEGT
VRWAKKALQSFLCAYTTYPRNLKHIFHIKSLHLGHVAKSFGLRDAPQNLTALPTAGSKKK
TKPRPKRSDLLKKTHGKHRLAEILRSEYSSGMDTGVSKVKKKKKQRKPGNQQIPT
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagggacgctgctcctcaacctcagctcggcgccgcggggccgcgggccc
ggcgcccccagccggtctagtgctctgaaaagaaagctccagtcaccacatggaaaccca
cctttgaaacgtaaacgtaagccgtcaataaacaccttcaagaaatgtgctccggaagct
gacatcagggagaagggaagttcatcacaaaaatctcttcctaagaagcagttgactgac
aaccgaaatgaaagccagaaaaccaaacctttcattaagacatccagcctgtttagaaac
aaccccgatatcccagaaattcacagaaaagcagtgcagcaggtgcaagaaaatgttttc
actacagattgctttagccagttggacctccatccgcatctgatctccacaataaacaat
gtcctgaagataagtagcatgaccagcgttcagaagcaaacaattcctgtgctcctgcaa
ggcaaagatgctctagtgagatctcagactggttcaggtaaaactcttgcctatgggatt
ccacttgtacagtctttgcaaggaatggaatccaaaatacagcgcagtgatgggccttat
gcactcatattagtcccaacaagagagcttgcactccagagttttgatacaatgcagaaa
ctacttaagccatttgcctggattgtgcctggtgtgctaatgggaggagaaaagagaaaa
tcggaaaaagccagattacgtaaagggataaatatcctcatttcaactcctggtcgcctg
gttgatcacatcaagtccacagaatgtattcatttccgtcgcactcagtggctgattatt
gatgaagcagacaggatcttggacctgggctttgagaaggatgtagcggtgatactcaac
gctttaaacactgagagagagagacatcagaatgtcctgctctcagccaccctcacagaa
ggagtaacacggctggctgatatcagtttgaatgatcctgtcagcatttccatagcagat
gaaatccagaaggggatcaaaccagcatcacaaatggatacagaacccaataattcatca
aactgcatgggccaggaaaactttgctgttccggagaagctcaagcagtatgtcatgatg
gtccccagcaaattgaggcttgtcacgctagcagcttttatccttgagaaatgcaagttt
gaaaaacaccacaagatgatcatctttttctccagctgtgaacaagtggaattctactat
gagctgcttctaaaggtcctttcaggagggctagagtcagaacagcctgaacgttcatct
gtctcctctgcatgcttacgctttctacgactgcacggcaacatggaacaggaagaaaga
acggaggtcttccaggagttcctaaaatccaagaccggcatcttgctttgcactgatgtt
gcagcacgtggcctagacctgcctcaagttacatggatcgtgcagtataacgctccagct
tcacctgcggaatacatccaccggatcgggaggacggctcgcattggctgtcacgggaac
agcctgcttgtcctggcgccttcggaggcagaatatgtcagcttgctggcttctcacaag
attaatgtttcagagataaagatggagaaggtgttatccagcctgatgaaagatgatcgc
ttcaaattgcacagaccaagaagcaagaaatcctgtggcacagaccctcaggaggtccgg
gagcgggccacgatcttgcagacgaaatttgaaaattacgttcactccaatgaggggact
gtccggtgggcaaagaaagcactgcagtctttcctttgtgcctataccacgtatcccagg
aacctgaagcacatcttccacatcaaatctctccacctgggtcatgtggccaagagcttt
ggcctaagagatgccccccagaacctgaccgctcttccaactgctggctcaaagaagaaa
accaaaccaagaccaaaaaggtctgaccttctcaagaagacccacggcaaacatcgcctc
gctgagatcttgcgatccgaatattccagtgggatggacactggtgtatccaaggtcaag
aagaagaaaaaacagagaaaacctggcaaccagcagattccaacataa
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