Rissa tridactyla (black-legged kittiwake): 128917729
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Entry
128917729 CDS
T09443
Symbol
SEC16A
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtd04131
]
128917729 (SEC16A)
Membrane trafficking [BR:
rtd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128917729 (SEC16A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec16_C
Sec16
Motif
Other DBs
NCBI-GeneID:
128917729
NCBI-ProteinID:
XP_054077113
LinkDB
All DBs
Position
14:3082784..3113462
Genome browser
AA seq
2472 aa
AA seq
DB search
MQQPPQTLPAGAAAPPPAGIARNAYWRNSSLSKRANATAAPVQPVTDPFAFGRQTPQGSP
LDNPSKGNALVMQSSSPAVFPQPAVMHTSPSRAGDSPHGLHTSLSAPVSQPGINTSTFSN
VPVPSLSPGYVINSTAEVNPNADLGLRGPAVPLHYNTGAAVENSFSAHPGMVSASNKPGG
RQDVSRDPNDVSSGPTATTLFPPPPQQPVSQWRPVQGNLQSPVRNFVPYPEPSSQLDVHN
ISQSSVSSSHPPPQANLQQGPVHQGIPQNIMQAPLAVGCEKNGKNGSANSSHHVNSIQPG
NVFRQNTEMPNTWLNQPYQEQFYSQPPLQDSSFIVPTAQENNPKKQSPDMSETSNRPIPT
DRDSGTLSMFFKGDETENEEILSSEKNYIVEKTEFDAYQPNSASSYPQPVHPQRVAANVL
SQAQFGTGSANEMVQKGMDVQYFPKIVSQQEPQAAKHSMFVSDDKAHIGDTSGNGGSQYE
NVENLECIQNQEVLPSEPQNINASSPAAGPDLYRYGSFPGQMLPKNALVSHAEGGPNLEA
PDSLPHPVRPDSVSSNYSNISHRSASSSARPQEQVGTFIQQESGKPEEESSASFFKQIDS
SPLGGDSSELNLGKNYHGNLSQPPTPSPPKPTGVFQTSANSSFEPVRSHGVGIKPAEIDQ
AKMVVELRENHSNQKNIKNTTVPAASPGNLEQPPDNLETIFMPQVHPLPLAVTGEAGNML
HSGPLMENIQSVSERRSSTRAQGAVKKCDSPATTLWAHNELPNFGGNVLLAPAAPAVYVP
AKQTVEVIQPPEEGLSNQQPSKPGTIAVHLSQDGNISSENLENPPKMGEEEALQSQASSG
YASLLSSPPTESLQNQPILIAQPNQSYNLAQPINFSISLSNQLSSNENNQPMKDSGVGDK
PAMGPHTSHAGGIISGENMPLPVMQVGSLLVNALPNTNLLKHNSLQSPVNSSDTASNQPA
NLLMKTPLNLAPEGQKNVNMESFVPEFASKPGSNSSVSPGMNLPSGSASALVPPVNSVVQ
ANNSTNHSNSKEEAAGVLDFTVSRMLEKSSASNSVQVHNQSLSGGPVYPQQSAGSAGQVG
PEVHDEQHFYQQVTKDVQHQAVSDRAVQGALPPQPQIQAAQMQQPTSSGQSSVPSNYQIA
TGTKAMQASQQHEKQVLSNHPPPVGPQEASSVQLTARYDQTSPDKQPVSGQPSGASTSTA
PSTATSQSVTPNVQQDLQRPSLPQTPQDAFGPPQNPYYYYRHPYDAYQPPYPPPYPPADP
RTAAHLYYMEDSYGQYDPRYRHYDSTGTAYMEPGSYRYSEPERPSSRASHCSDRPSSRQG
YTEDYYTKSGWSDYYPGYYPNSYDYGDPSRWERYSSAYDPRYRDPRSYDQRYWYDGEHNP
YQKREAYPYGNRHDRYEDNWRYDPRFTGSFDDESEPHRDPYGDEFDRRSVHSEHSGHSLR
SSRSVHSHQSSFSSRSQQSQLYRSNHDLTANVYETTAQAVSLHADYPYGGYAPNFDGQQP
FTDYGYPTETGWSAVEQAPLRPSTPEKFSVPHICARFGPGGFLIKVLPNLPSEGQPALVE
IHSMETMLQHSPEQEEMRAFPGPLAKDDTHKVDVINFAQNKATQCFKNENLIDKESASLL
WDFIVLLCRQNGTVVGTDLAELLLRDHKTVWLPGKSPNEANLIDFTNEALEQVEEESGEA
QLSFLTDSLVTAIDSLEKETERFRELLLYGRKKDALESAMKHGLWGHALLLASKMDNRTH
ARVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLTNNVDL
ESRTIATMGDTLASKGLLDAAHFCYLMAQVGFGVYTRKTTKLVLIGSNHSLPFLKFATNE
AIQRTEAYEYAQSLGTQPGCLPNFQVFKFIYACRLAEMGLAAQAFHYCEVISRTVLKDPH
YYSPVLIGQLIQMSSQLRLFDPQIKEKPEQESFIEPSWLVRLRHVDGQIKEGAIAYNTDR
STPPPYACSTPSSELDHASQCDGAGVGRDVGPGAENALLASLLPNMAQQMQSVQLMPSVP
QAVLDGSAAMIPPGDQEAVRSVPFYSVPSQPIGPGPGFAPAGFSNPYGTEPSPVYLGSGL
PPGGPPQETEPRSEEPTNLETGMQRIAPETPSQNSFPEQREEDFYGRMASMAPGRRSRSA
SQSSAHMGYGRRSRTTSESSAHSVGRERSNSAAKQPSPSPSVPVGKETKKEIKKEPAPKK
TGANWFRWLMGKGKNEAHLPDDKNKSIVWDEQKQRWVNLDEPEEESKPPPPPPTGFPKVP
QAAPPGAGGPPGAPVNMFSRRAAGSRARYVDVLNPGGTKSSGAAPAPSDLFAPLAPMPIP
ANVFVPNSVPGEPQPMEGSGAAEHAPAANQTNTDPAAAVEPEYLNPTILPPGSGLPNTDG
SQSGELSRSSSMSSLSREVSQHFNQPAAVPPSGGPSAGTVPFYNPSQFAQSPAVTGSSRL
GRIGQRKYPTLK
NT seq
7419 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcctccacagactcttccagcaggagcagcagctccacctcctgcaggcatt
gctcggaatgcatactggagaaacagctcgctcagtaagcgagcaaatgcaacagctgcc
ccggtgcagcctgtgacagacccttttgcatttggcagacagactccacagggttctcct
ttagataatccatccaagggcaatgcattggttatgcaaagctcttccccagcggtgttt
ccacagccagctgttatgcatacttcaccgtcacgtgcaggggacagtcctcatggactg
catacgtctttatcagctcctgtatctcaaccaggaataaataccagtacattttctaat
gttccagttccttcactgtccccaggttatgttataaatagtactgcagaagtgaatccg
aatgcagaccttggactccgtgggcctgcagtaccattgcattataatacaggagcagca
gttgaaaattctttcagtgcgcatcctggaatggtgtctgcatcaaacaaacctggaggt
agacaagatgttagtagagatccaaatgatgtttcttcaggacccactgcaacaacactc
ttccctccacctcctcagcagcctgtgtctcagtggaggcctgttcaaggtaacctgcag
tctccagttcgaaattttgtgccctatcctgagccatcttctcagcttgacgttcataac
atttctcagtcttctgttagttcttctcatcctcctccacaggcaaatttacagcagggt
cctgtacaccaaggtattccacaaaatatcatgcaagcgcctttagctgttggttgtgaa
aagaatgggaaaaatggctctgcaaatagcagtcatcatgtgaacagcatccagcctgga
aatgtgtttaggcagaatacagaaatgcctaatacttggttaaatcagccataccaggaa
cagttttactcacagccaccattgcaagactccagtttcatcgttcccacagctcaggaa
aataaccccaaaaaacagtctccagatatgtctgaaacatcaaatagacctattcccaca
gatagagattcaggaactctctccatgtttttcaaaggggatgagacagaaaatgaagaa
atactgtcatctgaaaaaaattacatagttgagaaaacagagtttgatgcttatcagcca
aattcggcatcctcgtatccccagccagtgcatcctcagcgagttgcagctaatgttctc
tctcaggcacagtttggtacaggttcagccaatgagatggtacaaaaaggaatggacgtc
cagtactttcctaaaattgtaagtcagcaggagccacaggctgctaagcactctatgttt
gttagtgatgacaaggcacatataggtgacacgtctgggaatggtgggtcacagtatgaa
aatgttgagaacctggagtgcattcaaaatcaagaagttctgccgagtgaaccacagaac
atcaacgcttcatcccctgctgctggtcctgatttgtacagatatggatcctttccaggt
cagatgcttccaaagaatgctcttgtgagccatgctgaaggaggaccaaatttggaggca
cctgattcattacctcatcccgtccgaccagatagtgtatcttcaaactatagcaacatt
agccataggagcgcttctagctcagcaagacctcaagagcaagttggtacgtttattcag
caagaaagtgggaagcctgaagaagaatcttctgctagcttctttaaacagattgactcc
tctcctttggggggcgattcaagtgagctaaacctgggcaagaactaccatggtaatctg
tcccaacctccaactccaagtcctcctaagcccacaggagtatttcagacaagtgcaaat
agttcttttgaacctgtgaggtcccatggagttggtataaaacctgcagagattgaccaa
gcaaagatggtggttgaattaagagagaaccactcaaaccaaaagaatatcaagaataca
actgtaccggctgcttctccaggcaatcttgaacagccgccagataatctggaaactatt
ttcatgcctcaggtacacccactgcctcttgcagtaactggtgaagctggaaatatgttg
cactctggacctcttatggaaaacatacaatcagtatctgagagaaggtcctcaacaaga
gctcagggagcagttaagaagtgtgatagcccagcaacaactctgtgggcgcataatgag
ttacctaattttgggggaaatgttcttctggctcctgctgctcctgcagtgtatgtacct
gccaaacaaactgtagaagtcattcagccaccagaagaaggcctgtctaatcagcagcca
agtaaaccagggactattgctgtgcatctttcccaagatggaaatatatcttctgaaaat
cttgagaatcctcccaaaatgggagaagaggaggcacttcagtctcaggcaagttctggt
tatgcaagtttgttgtcttctccacctacagagtctttgcaaaatcagcctatcctgatt
gctcagcctaatcaaagctataacttggctcagccaattaatttttctatttctctgtct
aatcagctaagcagcaatgaaaacaatcagccaatgaaggactctggggttggggacaag
cctgcaatgggtccccatacttcacatgctggtgggatcatttctggggaaaacatgcca
ttacctgtgatgcaagttggatctctgttagttaatgcacttccaaatactaatctgtta
aaacataattcattacaaagccctgttaattcctctgatactgcttctaatcagcctgca
aacttgcttatgaaaactccgcttaatttggccccagaagggcaaaagaatgttaatatg
gaaagttttgtgcctgaatttgctagcaagccagggtctaactcatccgtttctcctggg
atgaatctccccagtggaagtgcaagtgcactggtaccccctgttaattctgtagtacag
gctaataattctacaaatcattcaaatagcaaagaagaagctgctggagtgcttgacttt
acagtatcacggatgttggagaaaagcagtgcaagtaattctgtacaggtgcataatcag
tcactttctggtggtccagtatatcctcaacagtcagctggtagtgctggtcaggtgggt
cctgaggtgcatgacgaacaacatttctatcaacaggtgacaaaagatgtacagcatcag
gctgtctcagacagggctgtacagggagcattgccacctcaaccacaaatacaagcagct
caaatgcagcaaccaacatcatctgggcagtcctcagttccttcaaactaccagattgcc
acagggactaaagccatgcaggcatcacagcagcatgagaagcaggtgctgagtaaccat
cctccacctgtgggtccccaagaggcaagttcagtgcagttgacagcaaggtacgatcag
acgagtcctgataagcagccagtgtctggacagccatcgggtgcttcaacttccacagcc
ccttctactgccaccagtcagtcagtcacgccaaatgtgcaacaagacctgcagcgtccg
tccttgcctcagactcctcaggatgcctttggtccaccccagaacccttactactactat
agacatccttacgatgcttaccagcctccatatcctccaccttatcctcctgcagacccc
agaacagcagcacatctttattacatggaggatagctacggacagtatgacccacggtac
agacactatgatagcaccggcactgcttatatggagcctgggagctatcggtattctgag
cctgaacgtcctagttccagagctagtcactgctctgacaggccttcttctaggcaaggg
tatactgaagattattatacaaaaagtggatggagtgattattatccaggctattaccca
aactcatatgattatggagatccaagtcgctgggaacgttactcatcagcatatgacccc
agatacagagatcctagaagttatgatcagaggtattggtatgatggtgaacacaaccct
taccagaagagagaagcatatccatatggcaacagacatgaccgatacgaagataactgg
agatatgatcctcgttttactggaagttttgatgatgaatctgaaccccatagagatcct
tatggtgatgaatttgatagacgcagtgtccacagtgaacattctggtcatagtctccgt
agctcccgcagtgttcacagtcaccaaagtagtttcagctctcgctctcaacaaagccag
ctgtatagaagtaatcatgatctaacggctaatgtgtatgaaactactgcgcaggcagtg
tcgctccacgcagattatccatatggcggatatgctcctaactttgatggacaacagcct
tttacagattatggctacccgactgaaactggatggtcagctgtagaacaagcaccttta
aggccctcaacgcctgagaaattttcagtgcctcatatctgtgctaggtttggtcctggg
ggcttcttaataaaagtgctgccaaacctgccttcagaaggacagccagctctggttgaa
atacacagtatggagactatgttacaacattctccagagcaagaagagatgagagcattt
cctggtcctcttgctaaggatgacacccataaagtggatgttattaattttgcacaaaat
aaagctacacagtgctttaagaatgaaaatttaatcgacaaagaatctgcaagtctgctt
tgggacttcattgtactgttgtgcaggcagaatgggactgttgtgggaacagacctggct
gaacttttgctccgagatcataaaacggtgtggcttcctgggaagtcccctaatgaggca
aatctgattgatttcactaatgaggctttggaacaagtggaagaggaatctggcgaagcc
cagctctcatttctcactgacagtcttgtaactgcaattgacagtcttgagaaagagaca
gagagattcagagagttgctgctttatggccgcaagaaggatgctttggagtctgccatg
aagcatggtttatggggtcatgctctgctacttgccagcaaaatggacaacagaacacat
gcaagagttatgaccagatttgccaacagtctcccaattaatgaccctctgcagactgtt
taccagctcatgtctggaaggatgccagctgcatccacgtgctgtggagatgagaaatgg
ggagactggaggcctcatctagcaatggtgttatccaacttgaccaataatgtggacttg
gaatccaggaccattgctaccatgggagacactcttgcttccaaaggcctgctggatgct
gctcatttttgttaccttatggcccaagttggttttggagtttacacaaggaagacaaca
aagcttgtcctaattggatcaaatcacagcttgccgttcttgaagtttgccaccaatgaa
gccattcaaagaacagaagcctatgaatatgcacagtcactaggaactcagcctggctgc
ttgcccaatttccaggttttcaaattcatctatgcttgccgactagctgaaatggggctt
gctgctcaggctttccattattgtgaagtgatttccagaactgtccttaaagatccacat
tactattcacctgtacttattggccagctaatccagatgtcatcacagctacgcctgttt
gacccacagataaaagaaaaaccagaacaggaatcttttattgaaccttcatggttagta
aggcttcgacatgtggatggacagatcaaggagggtgcaatagcttataacacagacaga
tccaccccaccaccgtatgcatgtagtacaccaagctctgaattagaccatgctagtcaa
tgtgatggagcaggagttggccgtgacgtgggtccaggtgctgaaaatgcattgttagca
tccttattacccaatatggctcaacagatgcaaagtgtgcagctgatgccttcagtacct
caggctgtccttgatgggtcagctgctatgattcctcctggtgaccaggaagctgtccga
agtgtccctttctattcagtaccttctcagcctattggtccaggacctggctttgcacct
gcaggattttcaaatccgtatggaactgaaccatcaccagtgtatttagggtcaggacta
ccaccaggagggccaccacaagaaactgaaccacggtcagaagagccaacaaacctggaa
acaggaatgcagagaattgccccagagactccttcacaaaactccttccctgaacagaga
gaggaggatttctatggcagaatggctagcatggcaccaggacgaagatccagatctgca
tctcagtcttcagcacatatgggctatggacgaagatcacgaacgacttcagagtcctct
gctcattctgtgggacgcgagagatccaactctgcagcaaaacagccctctccttctccc
tctgttcctgtagggaaagagactaaaaaagaaataaaaaaggagccagcacctaaaaag
actggtgcaaactggtttcgctggctgatgggaaaaggaaagaatgaagctcaccttcca
gatgacaagaacaaatcaattgtttgggatgaacagaagcaacgctgggttaatctggat
gaaccagaagaagagagtaagcctccaccgccacctccaacaggatttcctaaagttcct
caggctgcaccacctggagctggaggcccacctggtgcccctgtcaacatgttctccaga
agagcagctggaagcagagcccgttatgttgatgtcctgaatccaggtggaaccaagtca
agcggtgctgctcctgcaccatcagacctatttgcccctttggcaccaatgccaattcct
gctaatgtatttgttccaaactcagttccaggggaaccccagccaatggaagggagcggt
gcagcagagcatgcaccagctgcaaatcagaccaacacagatcctgctgcagctgttgaa
ccagagtatttaaaccctacgatccttcctcctggatctggacttcctaacactgatggc
tcccaatcaggcgagctttcgcgctctagttcaatgagttcattatcacgtgaagtaagc
cagcattttaatcagcctgcagctgtaccgccttcgggggggccctcagcaggaacggta
ccgttctacaatccctctcaatttgcacaatctcctgcagtcactggaagttcaagactg
ggaagaattggacagaggaagtatccgacattgaagtag
DBGET
integrated database retrieval system
