Rissa tridactyla (black-legged kittiwake): 128917935
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Entry
128917935 CDS
T09443
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtd03037
]
128917935 (IFT88)
Cilium and associated proteins [BR:
rtd03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
128917935 (IFT88)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_19
TPR_7
TPR_8
TPR_6
TPR_14
TPR_16
TPR_11
ANAPC3
TPR_17
TPR_10
TPR_9
TPR-S
TPR_15
TPR_21
TPR_MalT
DUF6584
DUF2989
Coatomer_E
FumaraseC_C
GnHR_trans
Motif
Other DBs
NCBI-GeneID:
128917935
NCBI-ProteinID:
XP_054077654
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Position
1:22288566..22335390
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AA seq
823 aa
AA seq
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MFHRKMMQNVHLAPEADEDDLYSGYNDYNPTFDTEDLENDVAFQQAARTSHGRRPPVTAK
IPGTSASRPLATGFGSKATLTSSMGRPMTGAIQDGVARPMTAVHAAGYTKAAMRGSSFDP
LGQARGPAPPLEMKNSDSSEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKEAGRKE
RVLVRQREQIATPENINLDLTYSVLFNLASQYAANEMYAEALNTYQVIVKNKMFSNGGRL
KVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVAFIKTGQYVDAISSF
EQIMSMSPNLKAGFNLIVCYFAIGNTEQMKKAFQKLIAVPLEVDYDDKYISPNDDPHTNL
LIEAIKNDSLRQIERERKSMAEEYIMTAAKLIAPVIETSFAVGYDWCVEVVKASHYVELA
NDLEINKATTYLRQQDFNQALETLKMFEKKDSRVKSAAATNLSFLYYLENELAQATNYAD
LAVNSDRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNLGLTYKKLNRI
DEALDCFLKLHAILRNSAQVLHQIASIYEIMEDPNQAIEWLLQLISIVPTDPHVLSKLGK
LYDNEGDKSQAFHYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTEV
KWQLMVASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYVTKLK
KVEKLKEIREQRIKSGRDGSARSRREGNADGDSGGTKGERLSVKLKALPGTSEPYESSGS
KEIDASYVDPLGPQAERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacagaaaaatgatgcaaaatgtgcatctggctcctgaggctgatgaagatgat
ctttattctggctacaatgattataaccccacgtttgacacagaggatttagaaaatgat
gtggcttttcaacaggcagcaagaacaagtcatggtagaagacctcctgtgacagccaaa
attcctggtacatcagcttcaagacctttagctactggatttgggtcgaaggcaacttta
acttcatctatgggaagaccaatgacaggagctatacaggatggggttgctcgaccaatg
acagcagtgcatgctgcaggttacactaaggccgctatgagaggttcttcatttgatcct
cttggccaagcaaggggtcctgctccacctctggaaatgaaaaattcagacagttcagaa
gagaagattaggcagttggaaaaaaaagtgaatgaactggttgaagaaagctgcattgcc
aacagctgtggagacttgaaattggctctggaaaaagcaaaagaggctggaagaaaggaa
agagtattggtgagacaacgtgaacaaattgctaccccagaaaacatcaacttagatctc
acttactcagttcttttcaatctggccagtcagtatgctgctaatgaaatgtatgctgaa
gcactgaatacttatcaagttatagtgaagaataagatgttcagcaatggaggtagactg
aaggtgaatatgggaaatatatatttaaaacaacggaactattccaaagctatcaaattc
taccgtatggctctagaccagattcctagtgtccacaaagaaatgaggattaaaataatg
caaaatatcggagttgcattcattaaaaccggccaatatgttgatgccatttcttcattt
gaacagataatgagcatgtccccaaacctgaaagcaggcttcaacttgatcgtatgttat
tttgctattggaaacactgagcagatgaaaaaagccttccaaaaactgattgcagttccc
ttggaagtggattatgatgacaaatacatatcaccaaatgatgatccacatacaaatcta
ctgattgaagccattaaaaatgacagtttaagacaaatagaacgtgagaggaaatccatg
gcagaggaatacatcatgacagctgctaaactcattgcaccagtaattgagacgtctttt
gcagtgggctatgactggtgtgttgaggtagtaaaagcttcccactatgtagagttagcc
aatgacctggaaataaataaagcaactacttacttgaggcaacaggattttaaccaggca
ctggagactttaaaaatgtttgaaaaaaaggacagcagagtaaagagtgcagctgcaaca
aacctttccttcctttactatttggaaaatgaattggcacaagcaactaactatgcagat
ttagctgtaaattctgataggtacaatccagcagctctaactaacaaaggaaatactgtt
tttgcaaatggagactatgaaaaagcagctgagttttataaggaagctctcaggaatgat
tcctcatgcactgaagcactctataatcttggtttaacatacaagaagttaaacagaata
gatgaagctttggattgttttctgaaactccatgcgatccttcgaaatagtgcccaagtc
cttcaccagatagcaagcatatatgagatcatggaagatcccaatcaagccattgagtgg
ctcctgcagttgatcagcatagtaccaactgatccacatgtactttcaaagctagggaaa
ttatatgataatgaaggtgataaatcccaagcttttcattattactatgagtcataccgg
tatttcccttcaaacattgaggtcattgaatggcttggagcctactacattgacacccag
ttttgtgaaaaagccattgagtactttgaaagagcagcacttatcctaccgacagaagtg
aaatggcagctgatggttgccagttgctacaggagaagcggtaattaccagaaagcacta
gagaaatacaaagtcattcacagaaaattcccagagaatgttgaatgcctccgattttta
gttcgtctctgcacagatatggggctgaaagaagtccaggaatatgtgacaaagctcaag
aaagtggaaaaattaaaagaaataagagagcagcgcattaaatctggcagagatggcagc
gcacgtagccgcagagaaggaaatgctgatggtgatagtggtggtaccaaaggagaaaga
ctgagtgtcaaactaaaagctttgcctggaacaagtgaaccctatgaaagcagcggcagt
aaagaaatagatgcctcctacgtagatccacttggcccacaagcagaaagaccaaaaact
gcagcaagaaaaagaactgaggaagatgattttgctgatgaagaactaggagaggatttg
cttccagaatag
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