Rissa tridactyla (black-legged kittiwake): 128917952
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Entry
128917952 CDS
T09443
Name
(RefSeq) ATP-binding cassette sub-family A member 10-like isoform X1
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128917952
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtd02000
]
128917952
Transporters [BR:
rtd02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
128917952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_29
AAA_22
Rad17
AAA_23
Motif
Other DBs
NCBI-GeneID:
128917952
NCBI-ProteinID:
XP_054077695
LinkDB
All DBs
Position
15:14024604..14049782
Genome browser
AA seq
1630 aa
AA seq
DB search
MKTLQRNMSVFQQTKILLWKNVLIKWRMKMQSFQEWVLSLLFLPLVFMVCVFMVNIRYPE
VPYSSLGQLDDPAYNATGVTVAFTPVTVTTKQIMNKVALNSLMTGVKLEAVDNERALEKA
WISNNEIIGVVFKDNFSYHLRFAAGKVAIPNDNFGYIDNCYNFSSHYCDSPTYWYKGFLS
LQSSIDAAIIEVVTNHSVWEEMKSIAGVRMKSRSVISLITLEYSYFMITIVMCFSPFMYS
LSMNVVREKKKLKVLMKTMGLQDIAFWLSWSLLYAVYVMVLSCLLTALVVQDAFYLSSFP
AVLLLFFLYGLACIHLVFMLCSLLRTSKLAGSMGILITFLFGCLSLAVLIENLPEPLKLF
LGLFCPFAFNVGIAEVFHLEKYGMGFSFSNLMEESYFLFSTYIMLVFDSVFYMLLAMYFD
KVLPGKYGIPDPPFFCLKPLYWVRSRRGSTREMPRTAVSPEELLGDDVELVPQEFMGKEV
IRLNNVKKTYKKKDTKTEALRGLSLNIYEGQITALLGHSGAGKTTLLNVLGGLTLPSEGS
ATIYNYKLSEVGDREKIREMIGICPQFNIQFEVLTVKENLKTFAEIKGIKSNEVEREVQN
ILELLDISGVQDTQAEKLSGGQKRKLSIGIAMLGNPQVLFLDEPTAGLDPLSRHQVWSLL
KEHRAGRVILFSTQLMDEADILADRKAFMSHGRLKCVGSSLFLKKKWGIGYHLRIHVSES
CDLENVTALVKQYIPNVIFSGHSQYELRYKLPLENVNKFPDLFSGLDSCSDQGIINYGVS
MTTLEDVFLRLEEEATVDQEDEHVLGEEWAEARPRCPDETEPGSLLLSDTGKAAVGGLAL
WRQQVSAMAWVHLLKLKSSVKNLRSILLLYVVFLLPLVLQLSLVAAWQSVSLWELSSARY
FSPLGKRAHSETTNLLVHNSTGAGIEDFIHTLESQDLTVEITSEENITEELKHNGAIKVS
RKGQSYRFTVLCHVEAVNCFPVLVNVISNALLRALNSTVHIRIWNHPFFSIDNPRFWDYF
VSFYLIYMLLLFPGFPPHFAMGYMQDYKVRARAQLRISGLFPSAYWCGQALVDIPLCWLL
LFSMFGLPFAMSNKISRSIDSLFLLIMGTFGYGISIILFIYLISFIFRKGWNCDFWSFIL
IVVCFVSFIISRVMDFLTDIRITLYVVSLLVPVYPLMGVVIHCQQIFIEDMEIFEVTPKN
DVLIAVFAPYIHSVGFIFLLRYLEIKYGRAVLRKDPIFRICPRRESSHQHPEELEEEDED
VKAERTAVRNAIAAPAHKEKSVIIVSNLCKEYKIKQAGSIFKKKKKMATKNVSFCVKKGE
VLGLLGPNGAGKSTAIKMITGETTLTAGQVLMKRGDGATSHLEDHAPAFLGYCPQENPLW
PDLTVQEHLRVYAAVKGVCKEDTAAAVNRVVNALQLQDYLKKKTRKLSAGITRKLCFAVC
MLGNPAILLLDEPSTGMDPNGQRQIWKMIRASLKTEETGAILTTHYMEEAEAVCDRVAIM
VSGQLRCLGSIQYLKNKFGKGYLLEIKVKDPEHTDDLHAEILRIFPSAARQERFPSLLVY
KVPMEDALPLSQSFSKLEEAKRNFSFEEYSFSLNTLAQVFLELSREQEKDNFDLTLDGTF
EWKQLQLEDC
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atgaagacacttcagagaaatatgagtgtattccagcaaacaaaaattctcttgtggaaa
aatgtactgatcaagtggaggatgaagatgcaaagctttcaggaatgggtgctgtctctg
ctctttctaccactggtgttcatggtgtgcgtgttcatggtaaacatccgctaccccgaa
gtgccctacagctccctcgggcaactcgatgatcctgcctacaatgccactggggtcacc
gtcgcttttacacctgtcaccgtgaccacaaagcaaataatgaacaaagtggccttgaac
tctctaatgacaggtgtaaaactggaggcagtggacaatgagagagccctggagaaagcc
tggatttcgaataatgaaattataggggttgtgtttaaggacaacttctcctatcacctc
aggtttgctgctgggaaagtggctattccaaacgacaactttggatacatagataactgt
tacaatttctcatcgcattactgtgacagcccaacctattggtacaaaggcttcctgtcc
ctgcagtccagcatcgatgctgctattatagaggtggtgacaaatcattctgtttgggaa
gaaatgaaatcaattgctggtgttcgtatgaagtcccggagtgtcatctccttgattaca
ctagagtacagttatttcatgattactatcgtgatgtgtttctctccgttcatgtattcc
ttatcgatgaatgttgtgagagaaaagaagaagctcaaagtattgatgaagacgatgggg
ctgcaggatattgcattttggctctcctggagtctgctgtatgccgtttacgtgatggtc
ctctcctgcctgctgacggctctcgtggtgcaggatgctttctacctcagcagcttccct
gcggtcttactgctttttttcctgtacggcctagcatgtatccacctggttttcatgctc
tgctccctcttgaggacctccaaacttgccggctccatggggatcctcatcacatttctc
tttggatgcctgagcctcgcggtgctgatagaaaatcttccagaaccattgaagttgttt
cttggtctcttctgtccttttgcatttaatgttggcattgcagaggttttccatttagaa
aaatatggaatgggtttctctttttctaaccttatggaggaatcatactttttattttca
acttacattatgctggtctttgactcagtcttctacatgctcttagctatgtatttcgac
aaagttctgccaggcaaatacggcatcccagatcccccttttttctgcctgaagcccttg
tactgggtgcggagcaggagaggctccaccagggagatgcccagaactgcagtgagccct
gaggagctccttggtgatgatgtagagctggtgccccaagaattcatggggaaggaggtc
atcagactcaacaatgttaaaaagacatacaaaaagaaagacacgaagacagaagcttta
agaggtttgtctttaaatatttatgagggtcagatcactgctttactcggccacagtggg
gctggaaagacaacgctgttaaacgtgctcggtggactgactttgccttctgaaggctct
gcaaccatctacaactacaagctctctgaagtaggggacagggaaaagattagagagatg
attggcatttgcccacagttcaacatacagtttgaagtcttaacggtgaaagaaaatttg
aaaacttttgcagaaatcaagggcatcaagtccaacgaggtagagcgagaggtgcaaaac
attttggaactgctggatatcagtggcgttcaagacactcaagctgagaaactgagtggc
gggcaaaaacggaagttatccattggaatagccatgcttggaaacccccaggttttgttc
ctggatgagccaacggctgggctggatcctctttccaggcaccaggtgtggagcctcctc
aaggagcacagagctggccgggtgatcctcttcagcacgcagttaatggacgaggcggac
atcctggcagaccgcaaggcttttatgtcgcacgggaggctgaagtgtgtcggttcttct
ctcttcttgaagaaaaaatgggggattggctatcatttaaggatccatgtcagtgagtct
tgtgacttagagaacgtgacagctctggttaaacagtacatccccaatgtcatattctca
ggacacagtcaatatgagctgagatataaactaccgttggaaaacgtgaataaattccca
gatctgttcagtggcctcgacagctgctccgaccagggaattatcaattatggagttagc
atgacaaccctggaggatgtcttcctgaggctggaggaagaagccacagttgatcaagaa
gatgagcatgtccttggggaggagtgggcagaagcaagaccgcggtgccctgacgagaca
gagccgggctccctgctgctctccgacaccgggaaggcggcggttggtggcttggctctc
tggaggcagcaggtctctgccatggcatgggtgcacctcttaaagcttaagagttcggtg
aagaacctgcggtcaattttgctgctctatgtggtttttctgcttcctctggttttgcaa
ctgtccctggttgctgcctggcagagtgtgagtctctgggagctctcgtctgcgcgctac
ttctcgcccctggggaagagggctcactcggagacaaccaacctcctggtccacaactcc
acgggcgcaggcattgaagactttatccacacgctcgagagccaagatctcacagtggaa
ataacaagcgaggaaaatatcacagaggagctaaaacacaatggggctataaaagtgtct
cgcaaaggccagagctacaggtttactgtgttatgccacgtggaggccgtcaactgcttc
ccagtgcttgtgaacgtcatcagcaacgctctgctgagagccctcaattccactgtgcac
attcggatctggaatcacccatttttctctatagataatccacgattctgggattatttt
gtttctttttacctcatttatatgctgttgttattccctggttttcctcctcactttgca
atgggctacatgcaggattacaaggtgagagctcgtgcccagctgcggatctcggggctc
tttccctcggcatactggtgtggccaggcactggtggacatcccgctgtgctggctcctt
ctcttctccatgtttgggcttccatttgccatgagcaacaagatttccaggagcatcgac
agcctcttcttgctgatcatgggtacttttggctatggaatttctatcattctcttcatc
tacttgatctccttcatctttcgcaaaggatggaactgtgatttttggtcttttatcctg
atagtggtgtgctttgtttcttttatcatcagcagagtcatggatttcttaactgatatt
agaatcaccctctacgttgtgtctctcttggttcccgtgtacccactgatgggtgtcgta
atccactgccagcagatttttatagaagacatggagatatttgaagtgactccaaagaat
gatgtactaatagctgtctttgcaccctatatccattctgtgggtttcatttttcttctt
cgatatttggagataaaatatggaagagcagttctgagaaaggacccaatatttaggatt
tgcccaaggagagaaagcagccaccagcaccctgaagagctcgaagaggaagatgaagat
gttaaagctgagagaacagcagtgagaaatgccatagccgctccggctcacaaggagaaa
tcagtcattattgtcagcaatctgtgcaaagaatataaaataaagcaagctggttccatt
tttaagaagaagaagaaaatggccaccaaaaatgtttccttctgtgttaaaaaaggagaa
gtattagggcttctggggcccaacggagctggtaaaagcacagctatcaaaatgattact
ggagagacgacactgactgctgggcaggtgctgatgaagaggggagacggagcaacctcc
cacctcgaggaccacgcacccgccttcctggggtactgcccgcaggagaacccactctgg
ccggacctcaccgtgcaggagcatctgcgggtctacgcggccgtgaaaggggtgtgcaaa
gaggatacggctgctgctgtcaaccgagtagtgaatgctctgcagcttcaagactattta
aaaaaaaagacgagaaaattatctgcggggataaccagaaagctgtgtttcgcagtgtgc
atgctgggcaaccccgccatcctgctcctggatgagccgtcaactggcatggaccccaac
gggcagcgccagatctggaaaatgattcgtgcctccctgaaaacagaggagacgggagcc
atcctgacgacgcactacatggaggaggcggaggcggtgtgcgaccgtgtggccatcatg
gtgtctgggcagctacggtgccttggctccattcagtacctgaagaacaagtttggcaaa
ggctatctactggaaattaaggtcaaggatccagagcacactgatgatctccatgctgag
attttgaggattttccctagtgcagcccgtcaggagaggttcccctctttgctagtctac
aaggtcccaatggaagatgcactgcccctgtctcagtctttctccaagctagaggaagcc
aaacgaaacttcagctttgaggagtacagcttctctctgaatactttggctcaggtgttt
ttggaactctcccgagaacaggaaaaggacaattttgatctgactttggatgggactttt
gaatggaaacaacttcagctggaggactgttaa
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