Rissa tridactyla (black-legged kittiwake): 128918087
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Entry
128918087 CDS
T09443
Symbol
USP43
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtd01002
]
128918087 (USP43)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128918087 (USP43)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128918087 (USP43)
Peptidases and inhibitors [BR:
rtd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128918087 (USP43)
Ubiquitin system [BR:
rtd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128918087 (USP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
128918087
NCBI-ProteinID:
XP_054077941
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All DBs
Position
15:4224489..4244835
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AA seq
893 aa
AA seq
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GSGGERPPGAQGLRNHGNTCFMNAVVQCLSNTAPLAEVLALGRYRARGGRAEVTHRLAAL
VRALWTRDYTPQLSAEFKNIVSKHSAQFRGNAQHDALEFLLWLLDRMHEDLGAASPAQQT
RHPEEEPGEDGNGSTGGSPPPAQHPRGQSFVQSHFQAQYRSSLTCPHCLKQSNTFDPFLC
ISLPIPLRQTRALNVTLVLQCERRRFVRVGLAVPLLGTVAELREMVAREGRIPPEQVILA
EVSPRGFLRSLGDAEELGAAGEGAPLYAFQPPPARRAGCPRSLPASPGAAQRPPPAARSS
DCLHPGAGGRILLLLCNTAGDGPRLARFGPPLVLREERGVSWEQLQQSILAQLRALLRGE
VRAQGAGALFRIRLAGGSAPCAYLSPQDPRPLCHPAVERALQLSEAGGPPHVKLTVEWDV
STKERLFGNIQEEVVQDAESVRLQQQAHRQQHSCTLDECFQLYTKEEQLAPDDAWRCPHC
KVPQQGTVKLSLWTLPDILIIHLKRFRQVAEHRHKLTTLVRFPLRGLDMAPHVAQRGQAG
GQLLGRWAPWQPPLCLPPSCPRDYLYDLYAVCNHHGSMQGGHYTAYCCNALDGRWYSYDD
SRVEGVQEAEVSTRSAYILFYQRRNAVPAGAAGSSGRGPAAPWPSGHWLARLGGSARDTT
ATRPDGTTAPEKGGFEARPLVRGVQGRSLSVKLSPAGGPPRTVPPRWSFSGKERGAPGEL
VAYLESGRRPRCTRRSLLPLATGGDGHPDTPPATSPPPAGPPKQPGKGQEEAGTPRAPRR
PLRVPLLRRAASAGAEGTLRLPPKSQSSGLPRPEGDAGVPPARLSPASVAIARSQSSASL
PPRPEGGLRRSASLGRGAGGTPMAARGPPGATLQRGRQPLGSLCSPAVPESSF
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
gggagcgggggggagcggccgccgggcgcgcaggggctgcggaaccacgggaacacctgc
ttcatgaacgcggtggtgcagtgcctgagcaacaccgccccgctggcggaggtcctggcc
ctgggccgttaccgcgcccgcggcggccgcgccgaggtcacccaccggctggcggccctg
gtccgcgccctctggacccgcgactacacgccgcagctctccgccgagttcaagaacatc
gtctccaagcacagcgcccagttccggggcaacgcgcagcacgacgccctcgagttcctg
ctctggctgctggaccgcatgcacgaggacctgggcgccgcgtcccccgcccagcagacc
cgccaccccgaggaggagcccggcgaggatgggaatggcagcactggtggctccccgccg
cccgcccagcacccccgcgggcagagcttcgtgcagagccacttccaggcgcagtacagg
tcctccctgacgtgccctcactgcctgaagcagagcaacaccttcgaccccttcctgtgc
atctccctgcccatcccgctgcgccagaccagggctctcaacgtcaccttggtgctgcag
tgcgagcgccggcggttcgtgcgggtggggctggccgtgcccctgctgggcaccgtggcc
gagctgcgggagatggtggcgcgggagggacgcatccccccggagcaggtgatcctggcc
gaggtgtccccgcggggcttcctgcgctccctgggcgacgcggaggagctgggtgctgcc
ggggagggggctcccctctacgccttccagccgccccccgcccgccgcgcagggtgtccc
cgcagcctgcccgcctcccccggggcggcccagcgcccgccgcccgccgcccgctcctcc
gactgcctgcaccccggggcgggcggccgcatcctgctgctgctctgcaacacggcgggc
gatggcccccgcctcgccaggttcgggccgccgctggtgctgcgggaggagcggggcgtc
tcctgggagcagctccagcagagcatcctggcccagctgcgggctctgctgcggggagag
gtgcgggcgcagggcgcgggagccctcttccgcatccgcctggcggggggctcggccccc
tgtgcctacctgtccccgcaggacccccgcccgctctgccaccccgccgtcgagagagcg
ctgcagctgagcgaggcgggcggccctccccacgtgaagctgacggtggagtgggacgtg
agcaccaaagagcgccttttcgggaacatccaggaggaggtggtgcaggacgcggagagc
gtgcggctgcagcagcaagcgcaccggcagcagcacagctgcacgctggacgagtgcttc
cagctctacaccaaggaggagcagctggccccggacgacgcctggcgctgcccgcactgc
aaggtgccccagcagggcacggtgaagctgagcctctggacgctgcccgacatcctcatc
atccacctcaagcgcttccgccaggtggctgagcaccggcacaaactcaccacgctggtg
aggttccccctgcggggtctcgacatggccccccacgtggcgcagcggggccaggccggc
gggcagctcttggggcgctgggcgccctggcagccccccctctgcctgcccccgagctgc
ccccgcgactacctctacgacctgtacgccgtctgcaaccaccacggcagcatgcagggc
ggccactacaccgcctactgctgcaacgccctggacgggcggtggtacagctacgacgac
agcagggtggagggggtgcaggaggccgaggtgagcacccgcagcgcctacatcctcttc
taccagcgccgcaacgccgtgcccgcgggggcggccggcagctccggcaggggccccgct
gccccctggccctcgggacactggctggcccgcctggggggcagcgcgcgggacaccacg
gccacccggcccgatggcaccaccgccccggagaaaggtggtttcgaggccagacccttg
gtgcggggcgtccagggccgcagcctcagcgtcaagctgtcacccgccggtggccccccc
aggaccgtgcccccgcgctggtccttctccggcaaggagcggggggcaccgggggagctg
gtggcctatctggagtcggggcgccggccacgctgcacacgccgttccctcctgccgctc
gccacgggtggggacggccaccccgacacccctccggccaccagccccccgccagccggc
cccccgaaacagcccggcaaggggcaggaagaagcgggcaccccccgagccccccgccgg
cccctccgcgtgcccctgctgcggcgagccgccagcgctggcgccgaggggaccctgcgc
ctgccccccaaaagccagagcagcgggctgccgcggccggagggggatgcgggtgtcccc
ccggcacggctgtcccccgcttcagtggccatagcgcgctcgcagagctcggccagcctc
cccccgcgccccgaggggggtctgcgacgctcggcctcactgggcaggggcgcgggggga
acccccatggccgcccggggtccccccggggccacgctgcagcggggacggcagcccctg
gggtccctgtgcagcccggccgtgcctgagtccagcttctga
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