KEGG   Rissa tridactyla (black-legged kittiwake): 128918105
Entry
128918105         CDS       T09443                                 
Symbol
CPSF4L
Name
(RefSeq) LOW QUALITY PROTEIN: putative cleavage and polyadenylation specificity factor subunit 4-like protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03015  mRNA surveillance pathway
rtd05164  Influenza A
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    128918105 (CPSF4L)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    128918105 (CPSF4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rtd03021]
    128918105 (CPSF4L)
   03019 Messenger RNA biogenesis [BR:rtd03019]
    128918105 (CPSF4L)
Transcription machinery [BR:rtd03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     128918105 (CPSF4L)
Messenger RNA biogenesis [BR:rtd03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     128918105 (CPSF4L)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_12 zf-CCCH_3 zf-CCCH_4 zf-CCCH_RBM22
Other DBs
NCBI-GeneID: 128918105
NCBI-ProteinID: XP_054077961
LinkDB
Position
15:12675171..12677411
AA seq 201 aa
MQELVAGVEKIRFDLEADVEHQRGAQPLPFPGMDKPGEAICKYFHQGLCSKGVWCPFQHV
SREKTVVCKHWLRGLCKKGDGCDFLHEYDVTKMPECYFYSKFGECSNKDCPFLHINATTS
ATGCPWYDRGFCRHGPLCKYKHTRRVMCTNYLVGFCPEGPKCKFMQXGSNCLSPSSLKAG
LMTSTVDPSKVMQRQSNAIPS
NT seq 606 nt   +upstreamnt  +downstreamnt
atgcaggagctggtggctggtgtggagaagatcaggtttgacctagaggctgatgtggag
caccagcgaggagctcagcccctgcccttcccaggtatggacaagccgggagaggccatc
tgcaagtatttccaccaagggctgtgctccaagggcgtgtggtgcccattccagcacgtc
agcagggagaagacggtggtgtgcaagcactggctgcgggggctctgcaaaaagggcgac
gggtgcgactttctgcacgagtacgacgtgaccaagatgcccgagtgctatttctactcc
aaatttggtgagtgcagcaacaaggactgtcctttcctgcacattaatgccaccaccagc
gccacgggctgtccctggtatgaccgcggtttctgcaggcatggtcccctgtgcaagtac
aagcacacgcggagggtgatgtgcaccaactacctcgtcggcttctgcccagaaggaccc
aagtgcaaattcatgcagtaagggagtaactgcctgtccccctccagcctcaaggccggg
ctgatgacgagcaccgtggatccatccaaggtgatgcagagacagtccaatgccattccc
tcttga

DBGET integrated database retrieval system