Rissa tridactyla (black-legged kittiwake): 128918110
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Entry
128918110 CDS
T09443
Symbol
ITGB4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd04382
Cornified envelope formation
rtd04510
Focal adhesion
rtd04512
ECM-receptor interaction
rtd04518
Integrin signaling
rtd04810
Regulation of actin cytoskeleton
rtd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128918110 (ITGB4)
04518 Integrin signaling
128918110 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128918110 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128918110 (ITGB4)
04810 Regulation of actin cytoskeleton
128918110 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128918110 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtd04147
]
128918110 (ITGB4)
04515 Cell adhesion molecules [BR:
rtd04515
]
128918110 (ITGB4)
04090 CD molecules [BR:
rtd04090
]
128918110 (ITGB4)
Exosome [BR:
rtd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
128918110 (ITGB4)
Exosomal proteins of bladder cancer cells
128918110 (ITGB4)
Cell adhesion molecules [BR:
rtd04515
]
Integrins
Integrin beta subunits
128918110 (ITGB4)
CD molecules [BR:
rtd04090
]
Proteins
128918110 (ITGB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
I-EGF_1
EGF_Teneurin
PSI_integrin
EGF_integrin
EGF_TEN
EGF_2
vWA_SIBA-E
SEA
Motif
Other DBs
NCBI-GeneID:
128918110
NCBI-ProteinID:
XP_054077965
LinkDB
All DBs
Position
15:complement(7690543..7722797)
Genome browser
AA seq
1802 aa
AA seq
DB search
MCFRRMRMDVLPRACAALLLLSLLCATGLCQRSKDNRCVLSRAKSCTECLRVDKDCSFCT
DESFEEPRCNLRENLLRSGCGETSIVYTRGKMETQQNFSINTSLQRTQVSPQGMFMQLRA
GEEMSFNMDVFQPLESPVDLYILMDFSYSMSDDLDNLKSMGEKLAEFLQALTSNYTIGFG
KFVDKVSSPQTDMRPEKLREPWNNADSPFSFKNVIRLTSNIDSFSKELRKERISGNLDAP
EGGFDAILQTAVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEQCHLDD
NGTYAYDTKQDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDS
SNIVELLRTAFERIRSKMDIRADFVPKAMKTEFTSLMYEKTESGSFHITRGEVGKFNVRV
KALEYIGGQHVCSLPEKDRQGVIHVKPTSLSDSLKVTASVICDVCPCEQQKQVNSPKCSF
HGDFACGQCICHPGWRGDTCDCSPASSPNNEACIRPGDVEPCSGRGECLCGKCQCYSEDL
TQRFDGPFCQYDVLQCPRTSGFLCNDRGRCSKGACVCQSGWEGPGCECPTSNDTCIDSRG
GICNNHGRCECGRCICDKASLYTSSTCEISYSLGFQAVCESIRDCVRCQAWGTGNMKGNC
SKCHLQIQMVEELKKEEASEYCSFQDEEDDCTYHYTLEGDPTILPNTTVHVQKKKECPPG
SFLWLIPLLIFLILLLGLLLLLCWKFCACCKACLALLPCCARGRTVGFKEDHYMLRHSLM
SSDHLDTPMVRSGSLKGRDTIRWKINNNVHKQGLTSLAAANPKDLIPYGLSLRLTRLFTQ
NLVKPDTRECEQLRKEVDENLNEVFKRIPGCHKVQQTKFRLQPNSGKRQDHTIVDTVLTA
PRSAKPEIIKVVEKHVSHETFNDLKVSPGYYTVTSDQDAHGMVEFQESVELVDVRVPLFI
REDDDDEKQLQVEAIDVPTGIAEIGRRLVNITIIKEQASSLITFLQPAYSHSRFDKLAKI
PVLREIIENGKSQVTYRTRDLTAKNGRDYTFTEGDLVFQPGETRKEVQVPLLELTEIDTL
LHNCQLKQFAIDLLHPKHGAKIGRYPQTTVTIADPEVVDGVPLMTGLGQVSQSPKGRLSA
PLNPNADALSSREIRFNWFPPPGKPLGYKVKYWIQGDPESEARLIDVKALSAELSNLYPF
CDYEMQVCAYNAMGEGAYSDIIHCRTLEEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGE
ITAYEVSYGLVNEDNVPIGPMKKVLVEDPKKRMVLIENLRESQPYRYMVKARNGAGWGPE
REATINLATQPKRPMSIPIIPDVPIIDAEGGEDYDSYLMYSADVLRSPAGSKHPSVSDDS
EHLLNGRVDFSFPGSGSGTLTRTTNTSYHQLSSHMQQEHRVMGSSSLTRDYSTMLMGHDY
PGRFLPPIHEDAGRTIPRPRDVGFRSRAKVKGYYPSTGFRDSIIMTDGSAGICKYIDSRL
PLGVPDTPTRLVFSALGPTSLKVSWQEPHCEKEVQGYSVQYQLLNGGEVHRLTIPNPCQN
SVVVEDLLPNHSYIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPGSPFTLSTPSA
PGPLVFTALSPDSLQLSWERPRKPNGSILGYMVTCEMLHGGGEPRNIYVEGDNPETTLTV
PHLSENVPYKFKVQAKTTQGFGPEREGIITIESQDGGTFSQFGGQQYMREEVYNFPTEYT
TKTSISHSSLDPHFTDGMLMTTQRVESASSTLTKQVTKEFVSRTVMSSGTLSKQMERQFY
EA
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttcaggaggatgaggatggatgtgctgccacgggcatgtgccgcgctgctcctc
ctgtccctgctctgtgccaccggcctctgccaaaggagcaaagataaccgttgtgtgctg
tcccgggcaaagagctgcaccgagtgcctccgagtagacaaggactgctccttctgcact
gatgagagctttgaagagcctcgttgcaacttgcgggagaacttgctgcggtccggctgc
ggggagaccagcattgtctacaccaggggcaagatggagacccagcagaatttcagtatc
aacacgtccctgcagaggacacaggtgtccccccagggcatgttcatgcagctgcgagct
ggggaggagatgagcttcaacatggatgtcttccagcccttggagagccctgtggatctc
tacatcctcatggacttctcctattctatgtctgacgatctggacaacctcaaaagcatg
ggcgaaaaactagcggagttcctgcaagccctgacctccaattacaccatcggattcggc
aagtttgtggacaaagtctcatcccctcagacagacatgagacctgagaagctgcgcgaa
ccctggaacaatgccgactcccccttctccttcaagaacgtcatccgcctcaccagcaac
atcgacagcttcagcaaggagctcaggaaagagcgcatctctggcaacctggatgcccct
gagggtggctttgatgccatcctgcagacagctgtttgcaaggataagatcggctggagg
aaggacagcactcacctgctcgtgttctccactgaatccgcctttcactatgaagctgac
ggtaccaacgtcctggcagggatcctggcgcgaaatgatgagcagtgtcacctcgacgac
aacggcacctacgcgtatgacaccaagcaggactatccttcggtgcccaccctggtgcgc
ctgctgggccaacacaacatcatccccatctttgctgtcaccaaccactcctacagttac
tatgagaagcttcacaagtatttccccatctctgagatcggggtgctccaggaggactct
tccaacatcgtggagctgctccgcacagcctttgagcgcatccgctccaagatggacatc
cgagctgatttcgtccccaaagccatgaagacagagttcacctccttgatgtatgaaaag
acagaatctggctccttccacatcacccgtggagaagtgggcaagttcaacgtgcgtgtg
aaagcacttgagtacatcggcgggcagcacgtctgcagcctccctgagaaagaccggcag
ggagttatccacgtgaaacccacgtccctgagtgacagcctcaaagtcacagcctctgtc
atctgtgacgtgtgtccttgtgaacagcaaaaacaggttaactcacccaagtgcagcttc
catggggactttgcctgcggacagtgcatctgccacccaggctggcgaggggacacgtgc
gactgctccccagcgtcatcccccaacaacgaagcctgcatccgccccggggatgtggag
ccgtgctcgggccggggggagtgcctgtgtgggaagtgccagtgctactccgaggacctg
acgcagcgctttgatgggccgttctgccagtacgacgtcctgcagtgcccgcgtacctcc
ggcttcctctgcaatgatcgcggccgctgctccaagggcgcctgcgtgtgccagagtggc
tgggagggtccgggctgtgaatgtcccacaagcaacgacacctgcatcgacagccgaggg
ggcatttgcaataaccatgggaggtgcgaatgcggcagatgcatctgtgacaaggcttcg
ctgtacaccagctccacctgcgaaatcagctactccctgggcttccaggcggtgtgtgag
agcatccgggactgcgttcgctgccaggcctggggaaccggcaacatgaaagggaactgc
agcaagtgccacctccagatccagatggtggaagagctgaagaaagaggaggccagcgag
tactgctcattccaggatgaggaggacgattgcacgtaccactacaccctggagggagac
cccaccatcctccccaacaccaccgtccacgtgcagaagaaaaaagagtgcccgccgggg
agcttcctctggctcatccctctgctcatcttcctcatcctgctcctggggctgctgctg
ctgctctgctggaagttctgcgcctgctgcaaggcttgcctggccctgcttccctgctgc
gcacgaggtcgcaccgttggcttcaaggaggaccactacatgcttcgccacagcctcatg
tcctccgaccacctggacacccctatggtccgcagtgggtccctcaaaggtcgggacacc
atccgctggaagatcaacaacaacgttcacaagcagggcttaacctccctcgctgccgcc
aaccccaaagatctcattccctatgggctgtctctgaggctgacacggcttttcacgcag
aacctggtgaagccggacacccgggagtgtgagcagctgcgcaaggaagtcgatgagaat
ctgaacgaggttttcaagcgcatccccggctgccacaaggttcagcagaccaagttcagg
ttacagcccaattctgggaaaaggcaggaccacaccattgtggacacggtgctcaccgcc
cctcgctcagccaagccagagatcatcaaagtggtggaaaagcacgtttcccacgagact
ttcaatgacctgaaggtttcaccgggttattacaccgtgacctcagaccaagatgctcat
gggatggtggagtttcaagagtctgtggagctggtggatgtccgtgtcccacttttcatc
agggaggatgatgacgatgagaagcagctgcaggtggaggccattgatgtccccactggc
atcgcagagattggacgccggcttgtcaacatcaccatcatcaaagaacaagccagcagc
ctcatcaccttcttgcagccagcctattcccacagccgctttgataagctggccaagatc
cctgtcctccgggagatcatagaaaacgggaaatcccaagttacctacaggacccgggat
ctcaccgccaagaatggcagggactacaccttcacagagggtgacctggtcttccagccc
ggagagacccgaaaggaggtgcaggtccccttgctggagctgaccgaaatagataccctc
ttacacaactgccagctcaagcagttcgccatcgacctcctccatcccaagcacggcgcc
aagatcgggcgatacccccagaccacggtgaccatcgcggacccagaggtggtggatggt
gtccccttgatgactggcctgggacaggtctcgcagtcccccaaaggccgcctgagtgca
ccgcttaatcccaacgctgacgctctcagctccagggaaatccgcttcaactggtttcct
ccaccgggaaaacctctggggtacaaggtgaaatactggatccaaggagaccccgagtca
gaagcccgtctcatcgatgtcaaagccctatcagcagagctgagtaacctctaccccttc
tgtgactacgagatgcaagtctgcgcctacaatgccatgggtgaaggggcttactccgac
atcatccactgccgcacacttgaggaggtccccagcgagccaggacgcttggctttcaat
gtcgtgtcttccaccgtgacgcagctgagctgggctgagcctgcagaaaccaatggggag
atcacggcttatgaagtcagttatggactcgtcaacgaggacaacgtacccattggccca
atgaagaaggtgctggttgaagacccaaagaagcgcatggtgctgatagaaaacctgcgg
gagtcccagccctatcgctacatggtgaaggccagaaatggtgctggctggggacctgag
agagaagccaccatcaaccttgctacgcagcccaagcgcccgatgtccatccccatcatc
cctgacgtccccatcattgatgcagagggaggtgaggactacgacagctacctgatgtac
agtgcagatgtgcttcgctctccagctggcagcaagcatcccagtgtctctgacgattca
gagcacttgctgaatggccgagtggacttctccttccctggcagtggcagtggcacactg
acgaggacaacaaacaccagctaccaccaactgagctcacacatgcagcaggagcacagg
gtgatggggagctcctcactgacaagagactactccacgatgctaatggggcacgattac
ccggggagattcctccctcccatccatgaagatgctgggaggacaatcccacggccccgg
gatgtgggtttcaggagcagggcaaaggtgaagggttactaccccagcactggctttcgg
gactctataatcatgactgatgggtccgcggggatttgcaagtacatagactccaggctg
ccactgggcgtccccgacacccccacacgcctggtgttctctgccctgggacccacctcc
ctgaaggtgagctggcaggagccgcactgcgagaaggaggtgcagggctacagcgtgcag
taccagctcctcaatggaggagaggtgcaccgactcaccattcccaacccctgccagaac
tcggtggtggtggaggacctgctgcccaaccactcctacatcttcaaggtgaaggcacag
agcgaggaaggctggggccctgagagggaaggagtcatcaccatagagtctcaggtggac
ccgcaaagcccactcagccctgtaccaggttcacccttcacgctgagcacacccagtgct
cccggaccactggttttcactgccctcagccctgactccctgcagctcagctgggaaaga
ccccgcaagcccaatgggtccatcttgggctacatggtcacctgtgagatgctgcatgga
ggaggggagcccaggaatatctatgttgaaggagacaatccagaaactacccttactgtg
ccccacctgagtgagaacgtcccatacaagttcaaagtgcaagccaagaccacccaaggc
tttgggccagagagagaaggcatcatcaccatcgaatctcaggatggaggcactttctcc
cagtttggagggcagcagtacatgagagaagaagtgtataacttccccaccgaatacact
accaaaaccagcatcagccattcctccctggatccccacttcacagacggcatgctgatg
acgacccagcgagtggagagcgccagcagcaccctcaccaaacaggtcaccaaagagttc
gtgagccggacagtgatgtccagcgggaccctcagcaaacagatggagaggcagttctac
gaggcctga
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integrated database retrieval system
