Rissa tridactyla (black-legged kittiwake): 128918136
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Entry
128918136 CDS
T09443
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128918136 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtd03041
]
128918136 (DDX5)
03009 Ribosome biogenesis [BR:
rtd03009
]
128918136 (DDX5)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128918136 (DDX5)
Spliceosome [BR:
rtd03041
]
Complex A
U1 snRNP components
U1 related factors
128918136 (DDX5)
Complex B
128918136 (DDX5)
Ribosome biogenesis [BR:
rtd03009
]
Eukaryotic type
Pre-60S particles
Helicases
128918136 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
128918136
NCBI-ProteinID:
XP_054078007
LinkDB
All DBs
Position
15:15335088..15342704
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AA seq
604 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTVQEVEQYRASKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGF
AAAGMQAGFRAGNPAAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPT
SYSQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggatagagggtttggagccccccgttttggaggaagt
agaggtggacctctctctgggaagaaatttggaaaccctggggaaaaacttacaaaaaag
aaatggaatttagatgagctgcccaaatttgagaagaacttctatcaagaacatcctgat
gtagttagacgtactgtgcaagaagttgaacagtacagagcaagcaaagaagtcacagtt
aggggccataactgtccaaaaccgatcataaatttctatgaagctaattttcctgcaaat
gttatggaagtaattcagaggcagaacttcactgaaccaactgctattcaagcacaaggt
tggcctgttgctttgagtggattggatatggttggagtggcacagactggatcagggaaa
acactgtcttacttgttgcctgctattgtgcatataaatcatcagccattcctggagcga
ggagatggacctatttgtcttgtgctggcaccaactcgtgaactggctcaacaagtgcag
caggttgccgctgaatatagcagagcatgccgtttgaagtctacatgtatttatggaggt
gctccaaagggaccacaaattcgtgacttggaaagaggtgtggaaatctgcattgctaca
cctggaagactcatagacttcttagaagctggaaagaccaacctcaggaggtgtacttac
cttgtccttgatgaagctgacaggatgcttgacatgggttttgaacctcagatcagaaaa
attgtggatcagataagacctgacaggcaaactctgatgtggagtgctacatggccaaag
gaagtcaggcagctggccgaagacttcttgaaagaatatgtacacatcaacattggtgcg
ttagaactaagtgcaaaccacaacattcttcagattgtggatgtgtgtcatgatgtagag
aaagatgacaagcttattcgtttgatggaagaaataatgagtgaaaaggaaaataaaaca
attgtgtttgtggaaaccaaaagacggtgtgatgatcttaccaggaagatgaggagagat
gggtggccagcaatgggtattcatggtgataaaagtcagcaggagagggactgggttcta
aatgaattcaaacatggaaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccccaaattgcttcagttgattgaagacagaggttcaggtcgttcccga
ggtgatcgacgtgacagatattctgcgggcaaaaggggtggatttagtagttttagagag
agggagaactttgagagaacctatggtgcactaggaaagagagactttggagcaaaaact
caaaacggggcttacagtgcccagagtttcagtaatggaacaccttttggaaatggcttt
gcagccgcaggcatgcaggctggcttcagggctggtaaccctgctgcaggagcttaccag
aatggctatgagcagcagtatggaagtaatattgcaaatatgcacaatggcatgaaccaa
cagcagtatgcgtatcccgctactggtgctgctcctatgataggttacccaatgccgaca
agttattctcaataa
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