Rissa tridactyla (black-legged kittiwake): 128918241
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Entry
128918241 CDS
T09443
Symbol
USP48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtd01002
]
128918241 (USP48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtd04121
]
128918241 (USP48)
Enzymes [BR:
rtd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128918241 (USP48)
Peptidases and inhibitors [BR:
rtd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128918241 (USP48)
Ubiquitin system [BR:
rtd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128918241 (USP48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Actin_micro
Motif
Other DBs
NCBI-GeneID:
128918241
NCBI-ProteinID:
XP_054078164
LinkDB
All DBs
Position
16:complement(8403567..8432862)
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AA seq
1036 aa
AA seq
DB search
MAPRLQLEKAAWRWTETVPPEAVAQEHIEAAYRVRLEPCQRGACRRNCRGNPNCLVGIGE
HVWLGEIDENSFHNIDDPNCERRKKNAFVGLTNLGATCYVNTFLQMWFLNLELRQALYLC
PSANCEYAAGEGIPKDKDYEPQTICEHLQYLFALLQNSKRRYIDPSGFVKALGLDTGQQQ
DAQEFSKLFMSLLEDTLSKQKNPDVRNIVQKQFCGEYAYVTVCNQCGRESKLVSKFYELE
LNIQGHKQLTDCITEFLKEEKLEGDNRYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFV
FDRQTGHKKKLNTYIGFSELLDMEPFMEQKNGVYVYELSAVLIHRGVSAYSGHYIAHVKD
PQTGEWYKFNDEDIEKMEGKKLQLGIEEDLAEPSKAQTRKPKCGKGTHCSRNAYMLVYRL
QTREKSLTVEVPAFLQELVERDNCKFEEWCNEMAEMRKQSVARGKIKHEEVKELYKRLPA
EAGSPYDFISLEWLQKWLDESTPPKPIDNTACLCVHGKLHPDKISIMKRISEYVADFFYR
RYGGGPRLNVKALCKDCVVERCRILRLKNQLNEDYKTVTNLLKITVKGNDGFWVGKASLR
SWRQLALEQLNEQDEDGEHSNGKMNGNAQSKDESNEEKREEEEELNFNEDIVCPHGDLCI
SENERRVVSKEAWEKLKQYFPKAPEFPNNRECCSQCKILEREGEENEALHKMMASEQKTS
LQNLFHDKCRPCLGSWPQETDELYIVSQFFVEEWRKFVRRPTRCSPVSSVGNSALLCPHG
GLMFTYASMTKEDSKLIALIWPSEWERIQKLFVVDHVIKITRTQAAGADPESALYVSEPK
LCPECREGLLCQQQRDLREYTQATIYIHKVVDNKKVMKDAAPELNVSSSEAEEEREENKP
EGEQDPDFNQANGGAKRQKISHQNYITYQKQGIRRSTRHRKVRGEKALLVSANQTLKELK
IQIMHAFSVAPFDQNLSIDGKILSDDTATLGSLGVIPESVILLKADEPIADYAAMDDVMQ
VCMPEEGFKGTGLLGH
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcggttgcagctggagaaggcggcgtggcgttggaccgagacggtgccgccc
gaggcggtggcgcaggagcacatcgaagcggcctaccgcgtccggctggagccctgccag
cgcggcgcctgccggaggaactgccgggggaaccccaactgcctggtgggcatcggggag
cacgtctggctgggcgagatagatgagaacagcttccacaacatcgatgaccccaactgc
gagcgccgcaagaagaacgcgttcgtgggcttaacgaacctcggcgccacgtgctacgtc
aacactttcttgcagatgtggtttcttaacttggagctccggcaggccctctacttgtgt
cccagcgccaactgcgagtacgcggccggagagggcatcccaaaagacaaagactacgag
cctcagaccatttgcgaacacctgcagtacttgttcgccttgctgcagaacagcaaaagg
cgatacatcgatccctctggcttcgtcaaggcgctgggcttggacacggggcagcagcag
gatgcccaggagttttcaaagctcttcatgtcactgctggaagatactttatccaaacaa
aaaaacccagatgttcgaaacatagtgcaaaagcagttctgtggagagtacgcctatgtc
acggtctgcaaccagtgtggcagggagtccaaactcgtgtctaaattctacgagctggag
ttaaacatccaagggcacaagcagttgacagactgtataacggaatttcttaaggaagaa
aaattagaaggggacaatcgttatttttgcgaaacttgtcagagtaagcagaacgccacg
aggaagatcaggctgctgagtcttccctgcacgctcaacctgcagctgatgcgtttcgtg
tttgacagacaaactggccataagaaaaaactcaacacctacatcggcttctccgagctg
cttgacatggagccttttatggaacaaaaaaatggcgtctacgtgtatgaactcagcgcc
gtcctcatacaccggggcgtgagcgcctactccgggcactacatcgcccacgtgaaggat
ccgcagacgggcgagtggtacaagttcaacgacgaagacatagaaaagatggaggggaag
aaactgcagttggggattgaggaagatctagcagaaccttctaaagcccagactcgtaaa
ccgaaatgtgggaaagggactcactgctcccgcaatgcttacatgctggtgtacaggctg
caaacccgggagaaatctctgaccgtcgaagtaccagcttttctgcaggagctggtcgag
cgggataactgcaagtttgaggagtggtgcaacgaaatggccgagatgcgcaaacagagc
gtggccagaggcaaaatcaaacacgaagaggtgaaggagctctacaaaaggttacctgct
gaagctggttccccgtacgacttcatctccctggaatggctgcagaaatggctggatgag
tctactcctccgaagcctatagacaacacagcctgcctgtgcgtgcacggcaagctccat
cccgataaaatatccattatgaagaggatatcggagtacgtggctgacttcttctacagg
agatacggcggagggccccggctgaacgtcaaagcactttgcaaggactgcgtggtggaa
aggtgtcgaatcctgcgactgaaaaaccagttaaacgaagactacaaaaccgttacgaac
ttgctgaagataacagtcaaggggaacgacgggttttgggtgggaaaggcgtccttgcgc
agctggcgtcagttggctctggagcaattaaacgagcaagacgaagacggggagcacagc
aacggaaaaatgaatggaaacgcacaaagcaaagatgaatcaaatgaagagaagagagag
gaggaagaggaattaaattttaatgaagacatcgtttgcccacatggtgacctgtgcata
tcggaaaacgaacggagggtggtttcgaaggaagcctgggaaaaactcaagcaatatttt
ccaaaagcccccgaattcccaaataacagagagtgctgttcccagtgcaagattttggag
cgcgaaggggaggaaaacgaagccctgcataagatgatggccagcgagcaaaagacttct
ctccagaacctgttccacgataaatgcagaccttgcctgggcagctggcctcaggagaca
gatgagctgtatattgtttcgcagttctttgtagaagagtggaggaaatttgtcaggagg
ccgacgcgctgcagccccgtctcctcggtaggaaacagcgctcttctctgtccccacggg
ggtctcatgttcacctacgcttccatgaccaaagaagactccaaacttatagctctgata
tggcccagcgagtgggagaggattcaaaaactctttgtcgtggatcacgtcatcaaaatc
acccgaacgcaggctgccggggcggaccccgagagcgcactttacgtctctgagcccaag
ctctgtcccgagtgcagagaagggcttttatgccaacagcagcgggacttgcgtgagtac
acccaagccaccatctacatccataaagtggtggataacaaaaaggtaatgaaggatgct
gctccggagctgaacgtgagcagctcggaagctgaagaggaaagggaggaaaacaagcca
gagggggagcaagacccagattttaatcaggccaacggtggtgcgaagcgccagaagatc
tcgcaccagaactacatcacttaccaaaagcaaggcatcaggcggagcacccggcaccgg
aaagtcagaggggagaaagcactgctcgtttctgcaaatcagacactcaaagagctaaaa
atacagatcatgcatgcattttcagttgctcccttcgaccagaatttgtccatcgacggg
aagatcctgagcgacgacaccgccaccctcggcagcctgggagtcatccccgaatccgtc
attttattaaaggccgacgaacccattgcggattacgcggcgatggacgacgttatgcaa
gtttgtatgcccgaagaaggatttaaagggactggtttgctcggacactga
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