Rissa tridactyla (black-legged kittiwake): 128918743
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Entry
128918743 CDS
T09443
Symbol
DDX25
Name
(RefSeq) ATP-dependent RNA helicase DDX25 isoform X1
KO
K18656
ATP-dependent RNA helicase DDX25 [EC:
5.6.2.7
]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128918743 (DDX25)
Enzymes [BR:
rtd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128918743 (DDX25)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128918743 (DDX25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
AAA_30
Motif
Other DBs
NCBI-GeneID:
128918743
NCBI-ProteinID:
XP_054079284
LinkDB
All DBs
Position
17:complement(7942966..7949392)
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AA seq
483 aa
AA seq
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METGDTRWPSGVRTGTGSGDDISIADTDSGRPSASLPMTPSRGCQRLRDGMPARGTWRVG
LAETSLLNKLIRTSLVESSHRVEILQQDPSSPLFSIKTFEELPLKKELLQGIYLMGFNRP
SKIQETALPIMLAYPPQNLIAQSQSGTGKTAAFVLAMLSRVNAAEKHPQCLCLAPTYELA
LQIGHVIENIGQFCADIKVTYAVRGNQVPQGSALEEQIVIGTPGTMLDWCFKRRAIDVKK
IAMFVLDEADIMIDTQGLSCQSIRIQRALPKSCQMLLFSATFKETVRAFAVQIVSNPIVI
KLREEELTLSNIRQYYFVCRSREEKYRALCNIYGGITVGQAMIFCQTRRIADWLSVEMSQ
DGHQVAILTAELTVAQRANVIQRFRDGKEKVLIATNVCARGIDVQQVTIVVNFNLPTDQK
CRPDFETYLHRIGRTGRFGKRGIAFSMVERQNVRLVRVIEEHFQTEIKQLDPDDMDELER
LQN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggtgacacgcggtggccctctggggtccggactgggaccggatctggagat
gacatctccatcgccgacacggacagtgggcgcccctcggcaagtttgccgatgacaccg
agccgcgggtgtcaacgcctgagggacgggatgccagccagagggacctggagagtgggc
ttggcggaaacctccctgctgaacaagctgatccgcacgtccctggtggagtccagccac
cgcgtggagatcctgcagcaggaccccagctccccgctcttctccatcaaaaccttcgaa
gagctgcccctgaagaaggagcttttgcaggggatttacctcatgggcttcaacagaccg
tccaaaatccaggagacggctctgcccatcatgctggcgtatccgccccaaaatctgatt
gcccagagccagtcagggacagggaaaacggcagcttttgtcttggcgatgctgagcaga
gttaatgccgccgagaaacacccgcagtgcctctgcttggctcccacctacgagctggcc
ctgcagatcgggcacgtcatcgagaacatcgggcagttttgcgccgacatcaaggttacg
tacgctgtccggggaaaccaagtcccgcagggcagcgcgctggaggagcagatcgtcatc
gggacgccggggaccatgctggactggtgtttcaaacggcgagccatcgacgtcaagaag
atcgccatgttcgtgctggacgaagcggacatcatgatcgacacgcagggcctctcctgc
caaagcatccgcatccagagggctttacccaagagctgccagatgctgttgttctccgcc
accttcaaggaaaccgtgcgggccttcgccgtgcaaatagtctccaaccccatcgtcata
aagctgcgggaggaagagctcaccctcagcaacatcaggcagtactacttcgtctgcagg
agccgggaggagaagtaccgcgccctctgcaacatctacggcggcatcaccgtcggccag
gccatgatcttctgccagactcggaggatcgcggactggctgtcggtggagatgagccag
gacgggcaccaggtggccatcctgacggcggagctgacggtagcccaacgggccaacgtc
atccagcgcttccgtgacgggaaggagaaggtcctcatcgctaccaacgtctgcgccaga
gggatcgacgtgcagcaggtcaccatcgtggtgaacttcaacctccccaccgatcagaag
tgccggccggatttcgagacctacctccaccgcatcgggcgaacgggacgcttcgggaag
aggggcatcgccttcagcatggtggaacgccagaacgtgcggctcgtgcgggttatcgag
gagcatttccagaccgagatcaagcagctggacccggacgacatggacgagctcgagagg
ctgcaaaactga
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