Rissa tridactyla (black-legged kittiwake): 128918791
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Entry
128918791 CDS
T09443
Symbol
SYNC
Name
(RefSeq) syncoilin isoform X1
KO
K10377
syncoilin 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128918791 (SYNC)
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
128918791 (SYNC)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
Laminin_II
CENP-H
TPR_MLP1_2
FAZ1_C
TCAD7
Cob_adeno_trans
Golgin_A5
BRE1
Motif
Other DBs
NCBI-GeneID:
128918791
NCBI-ProteinID:
XP_054079390
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Position
18:537954..545284
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AA seq
525 aa
AA seq
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MCSAEPEALGSGGGRDLMAEPEPPPELQLDEAGASSAPPGAAAGAAPHPDLSRSPSDPAG
GAGVTPLHRDSPDACRELQPDGGDASLELNMPGPQLGEDAARAEIPLDVDGAGIPLDGDA
DGVGIPLDVDGAGIPLDGDADGVGIPLDVDGAGIPLGIDPGGTGILLDMDDADGVGIPLD
MDTDGAGIPADVDADGAGIPLDMDAEGAGSPLDADGAEHQCLTLEELGDYFQECIEAVEQ
LEKERDSLIAELSQLREPALQEIRHAHEEIQAACRLLAKVELERDNLKDEIRQIKQKLFK
VTKECVACQYQLESRRHDLSQHAAYQGELETQAGQLSGELSQLKETCEKEKEVLRQRLEA
PPCRQDNLYLQESRRLSMEFESFVAESRRGLEEHYEPQLLRLLERREAGAKALQEMQGEI
QGMKEALRPLQGEVSRLRLQNRSLEEQIVLVKQKRDEEVGQYREQVEELEDRLKELKNGV
QLQQRKNQELEELRTSLHRELSIYKGCLEIYGHLCKSEEKAEEEC
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagcgccgagccggaggcgctgggctccgggggaggaagggacctgatggcagag
cctgagccccctccagagctgcagctggatgaagccggagcatcctccgccccgccggga
gcggctgcaggtgctgctccgcacccggacctttcgcgcagcccgtcagacccagcgggg
ggtgcgggggtgacacccctgcaccgggacagcccggacgcctgccgggagctgcagcca
gacggcggggacgcttccttggagctaaacatgccagggccccagctgggcgaggatgcg
gccagggctgagatcccgctggatgtggatggggcaggaatcccactggacggggatgca
gatggagtagggatcccactggatgtggatggggcaggaatcccactggatggggatgca
gatggagtagggatcccactggatgtggatggggcaggaataccactcggcatagatcca
ggtgggacggggatcctgctggacatggatgatgcagatggagtagggatcccgttggac
atggacacagacggggcagggatcccagccgacgtggatgcagacggggcaggaatccct
ctggatatggatgcagagggggcaggcagccccctggacgcggatggtgcagagcatcag
tgcctgaccctcgaagagctgggggactacttccaagaatgcatcgaagccgttgagcag
ctggagaaagagagagacagcctgatcgcggagctctcccagctgcgggagccggcgctg
caggagatccgccatgcccatgaggagatccaggcagcttgccggctgctggccaaagtg
gagctggagagggacaacctgaaggatgagatccggcagatcaagcagaagctgttcaag
gtgacgaaggagtgcgtggcttgccaataccagctggaaagccggcggcacgacctctcc
cagcacgctgcttaccagggcgagctggagacccaggctgggcaactctccggagagcta
tcccagctgaaggagacctgcgagaaggaaaaggaggttttgaggcagcggctggaggct
ccaccgtgtcggcaggataacctgtacctgcaggagagccgccggctctccatggagttc
gagagcttcgtggcggagagccggcggggtctggaggagcactacgagccccagctgctg
cggctgctggagagacgggaggcgggggcgaaggcgctgcaggagatgcagggggagatc
caggggatgaaggaagccctgcggcccttgcagggggaggtcagccggctgcggctgcag
aaccgcagcctggaggagcagatcgtcctcgtcaagcagaagcgggatgaagaggttggg
cagtaccgggaacaggtcgaggagctggaagacaggctgaaggagctgaagaacggggtc
cagctccagcagcgcaagaatcaggagctggaggagctgaggaccagcctccaccgggag
ctctccatctacaagggctgcttagaaatctacggccacctttgcaaatcggaagaaaaa
gcagaggaggagtgttag
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