KEGG   Rissa tridactyla (black-legged kittiwake): 128918805
Entry
128918805         CDS       T09443                                 
Symbol
TAF12
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    128918805 (TAF12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rtd03021]
    128918805 (TAF12)
   03036 Chromosome and associated proteins [BR:rtd03036]
    128918805 (TAF12)
Transcription machinery [BR:rtd03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     128918805 (TAF12)
   Coactivators
    SAGA/TFTC/STAGA complex
     128918805 (TAF12)
Chromosome and associated proteins [BR:rtd03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     128918805 (TAF12)
    STAGA complex
     128918805 (TAF12)
    TFTC complex
     128918805 (TAF12)
    SAGA complex
     128918805 (TAF12)
    SLIK complex
     128918805 (TAF12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa CENP-T_C TAF4 DUF5827 TAF10 DUF6965
Other DBs
NCBI-GeneID: 128918805
NCBI-ProteinID: XP_054079424
LinkDB
Position
18:5078480..5086072
AA seq 212 aa
MASPFTGPTAVADVIKDLDTQIALIGLGPHNPKKKQDLDKLYDLKAKAQQIMNQFGPSTL
INLSNFSSIKPEPASTPPQSSMANSTTVAKMPGTPSGGGRLSPESNQVLTKKKLQDLVRE
VDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHLERQWNMWIP
GFGSEEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 639 nt   +upstreamnt  +downstreamnt
atggcctctccgttcactggccccacagcggttgctgatgtaattaaagatctagacact
cagatagctttgattggtttgggtccccacaaccccaagaagaagcaggacctagataag
ctttatgatctaaaagctaaagcccaacagattatgaaccagtttggcccctctaccttg
atcaacctctccaacttctcctccataaagccagaaccagccagcactcccccgcagagc
tccatggccaacagcaccaccgtggcaaagatgccggggacgcccagcggaggaggacgg
ctcagtcctgaaagcaaccaggttttaaccaagaagaaattgcaggacctggtgcgtgag
gtcgatccgaacgagcagctggatgaagacgtggaggaaatgctgttgcagatcgccgat
gatttcatagagagcgtggtgacggccgcctgccagcttgcgcggcatcgcaagtcgaac
accctggaagtcaaagacgtccagttgcatctcgagcgtcagtggaacatgtggatcccg
ggctttggttcggaagaaatcaggccctacaaaaaagcctgcactacagaagctcacaaa
cagagaatggcactgattcgcaaaactaccaagaaatag

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