Rissa tridactyla (black-legged kittiwake): 128918826
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Entry
128918826 CDS
T09443
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128918826 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtd03000
]
128918826 (ARID1A)
03021 Transcription machinery [BR:
rtd03021
]
128918826 (ARID1A)
03036 Chromosome and associated proteins [BR:
rtd03036
]
128918826 (ARID1A)
Transcription factors [BR:
rtd03000
]
Eukaryotic type
Helix-turn-helix
ARID
128918826 (ARID1A)
Transcription machinery [BR:
rtd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128918826 (ARID1A)
Chromosome and associated proteins [BR:
rtd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128918826 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
128918826
NCBI-ProteinID:
XP_054079498
LinkDB
All DBs
Position
18:4357214..4417810
Genome browser
AA seq
2279 aa
AA seq
DB search
MAAQVAPAAASSLGAPAPSELKKAEAQQRDCPPEEAGGEAAAAERGGEKQAESEGPTGKE
LQDGADSNGGGAGAESDLKSSNGNPGPRPAAAAATLNNNLPEPPGGGGGSSDGVGAPQQQ
QPPQQPPPSHPAALPPPAYGFGQPYGRGAQAAAAAAAAAAAAAAFHQHGGQQSPGMAALQ
SGGLEQSYPGPAGAPAGPPPPQNSHGGAEHGFPNHQYNSYYAAGAGRSAGSYPPPPQAYA
LSSPRGSGQSSAPPAAGAKSPAAAAFQQQRFGVMGPSAAGGAGGGGATPQPTATPTLNQL
LTSPSSARGYQGYPGGDYSGGPQDGGAAAKGPAAAEMVSQYGGGNSQGWAAAAGGAPPRS
HHAPMSPGSSGGGGQSLGRSQQPSSPMDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGY
PGQPYGPQTPQRYPMGMQSRTQSTMGSISYAQQMPPYGQQGPSAYGQQSQTPYYNQQSPH
PQQQQPPYSQQPPSQTPHSQPSYQQQQQPQSQPPQLQTSQPAYSQQQSQPPHQQSPTPYP
QQQSTAQQHQQSQPPYSQQQSQSPYQQQQQTQQTASAALSQQSSSYPPSQPQQQQSAYSQ
QRFPPPQELSQDSFGSQASSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEG
ALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLS
PAAVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQ
SSGGQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPM
GAGSQMHGQTGVPPYSGLPPGRMSHATMGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQ
EAAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNM
ANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYEL
GGEPERKIWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWR
ELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPS
PAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGS
DPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSG
MGDPYNRAAGPGMGNMAMGQRQHYSYGGPYDRVRTEPGMGPEGNLATGTPQPNIMPSTPE
SGMYSPSRYPQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSY
GPPAKRHEGEMYNVPYSTGQGQTQQQLPPAQTQQPSQQQTAQPSPQQDLYNQYGSTYPAA
DRRSAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPLQSTPEGPQQGAMWQGRNE
IGYSYPNRQSTGSAPQGPAYHGVTRTDEILHSDQRVNHEGPWPSHGNRQPAYGPSAPVPP
MTRPPQSNYQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPAS
HITPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAE
STWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRT
LLDPERFCKSSASSHEEGEEDDEPRSLNCEEEEEDEEEEEAAFSSKDKAPLESSEEKLVS
KFDKLPVKVVQKNDPFVVDYSDKLGRVQEFESGLLHWRIGGGDTTEHIQTHFESKTELPL
THKRASCNSVLRKRSAAESNPSTREGETPPSDSSSEKRITATMDDMLSARPGSLAGEEEE
VKALETAKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSN
IIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKV
EWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTL
GPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREM
AVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQNPPFEST
SVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcaggtcgcccccgccgccgccagcagcctgggcgccccggctccatccgag
ctgaagaaagcggaggcgcagcagcgggattgtcccccggaggaggcggggggtgaggcg
gcggcagcggagcgcggcggtgagaagcaggcggagagcgagggccccacggggaaggag
ctgcaggacggggccgacagcaacggagggggcgcaggggccgagtccgacctgaagagc
tcgaacgggaacccgggccccaggcccgccgctgccgccgccaccctgaacaataacctc
ccggagccgcccggtggcggcggcggcagcagcgacggggtgggggcgccgcagcagcag
cagccgccgcagcagcctcccccttcccacccggccgccttgcccccgccagcctacggc
ttcgggcagccctacggccggggagcccaggccgctgccgccgccgccgctgcggccgcc
gccgccgctgccttccaccaacatggcggacaacaaagccctggcatggcagcgctgcag
agcggaggcctggagcagtcctacccggggccggcgggagcccccgcggggccgccccct
ccccagaactcgcacggcggcgccgagcacggcttccccaaccaccagtacaactcctac
tacgcggccggcgccggccgcagcgccggttcctacccgcctcccccccaggcctacgcc
ctgagctccccccggggcagcgggcagagctccgctccgccggccgccggcgccaagtcc
cccgccgccgccgccttccagcagcagcgcttcggggtcatggggccctcggccgccggc
ggcgcaggaggagggggcgccaccccgcagcccaccgccacccccaccctcaaccagctc
ctcacctcccccagctccgcccgcggctaccaagggtaccccgggggcgactatagcggc
gggccgcaggacgggggagccgccgccaaggggccggccgcagcggagatggtctcgcag
tacggcgggggcaacagccagggctgggccgcggcggccggcggggccccgccgaggagc
caccatgcgcccatgagccccgggagcagcggcggcggaggacagtccctcggcaggagc
cagcagccttcaagcccaatggatcagatggggaagatgaggcctcagccgtatggagga
aacaacccctacacacaacaacagggacctcaagcggggccacagcaaggacatggctat
ccaggacagccgtatgggccacaaactcctcagagatatcccatgggaatgcaaagcagg
acgcaaagtacaatgggcagcatctcatatgcacagcagatgcctccttatggacagcag
ggccccagtgcatatgggcagcagagccagactccgtattacaaccagcaaagccctcat
ccccaacagcagcagcctccatattctcagcagcctccatcccagacccctcactctcag
ccttcgtatcagcagcagcaacagccccaatctcaacctccacaacttcagacatcgcag
cctgcctattcgcagcagcagtcccagccaccccatcagcagtccccgactccgtatcct
cagcagcagtccacagcccagcaacaccaacagagtcagcctccctactcccagcagcag
tcgcagtcgccctaccagcagcagcaacaaactcagcagacggcttccgcggctctttct
cagcagtcatcctcataccctccgtcacagccgcagcagcagcagtctgcgtactcccag
caacgcttcccccctcctcaggagttatctcaagactcgtttgggtcccaggcatcatct
gctccctcaatggcttccagtaaagggcaagaagatatgaacttgaaccttcagtccaga
ccttctagcctgccggacctgtctggttcaatagatgatctacccatgggtacagaagga
gccctgagtcctggagtaagcacatcagggatttccagcagtcaaggagagcagagtaac
ccagctcagtctcctttctctccacatacctctcctcacctgccaggcatcagaggaccc
tccccatccccagttggatctccagctagtgttgctcagtcccgctctggtccgctttca
cctgctgcagtaccaggcaatcagatgccaccccgaccgcccagtggccagtcggacagt
atcatgcatccttccatgaaccagtcaagcatagcgcaagatcgaggttacatgcagagg
aaccctcagatgccccagtacagctcaccccagcccggctcagccttatctccccgtcag
tcttctggaggacagatgcacgctggaatggggccataccagcagaactccatgggaagc
tacggaccccagggtgggcagtacggaccacaaggaggttatcccaggcagccaaactac
aatgcgatgtccaatgccaactaccccagtccaggaatgggaggaagcatgaatcccatg
ggagccggaagccagatgcacgggcagactggtgtgccgccgtacagcgggcttcctcca
ggcaggatgagccatgcaaccatggggaacagaccttatggacctaacatggcgaatatg
ccacctcaggtggggaccgggatgtgccccccaccaggtggcatgaatcgcaaagcacaa
gaagcggctgccgctgccatgcacgctgctgccaactccatccagaacaggcctcctggt
tatcccaacatgaaccaagggggaatgatgggcactggacctccttatggacagggaatt
aacagtatggctggcatgataaacccccagggcccaccctacccgatgggggggaatatg
gcgaacaactctgcagggatggcagcaagccctgaaatgatgggtcttggggatgtcaaa
ttaacacctgcaactaaaatgaacaataaggcagatgggacgccaaaaacagaatccaag
tcaaagaagtccagttcctctactacaaccaatgagaagatcaccaaactctatgagctg
ggtggtgagcctgagaggaagatctgggtagatcgttacctggcctttactgaagagaag
gccatgggcatgaccaatctcccagcggtaggcaggaaacccttggacctttaccggctc
tacatctcagtgaaggagattggaggattgactcaggtcaacaaaaacaagaaatggcgt
gagttagccacaaatctcaatgtgggcacgtccagcagcgcagctagttctttgaagaag
cagtacatccagtgtctctatgcctttgagtgcaagattgagcgaggcgaagatccccct
ccagatatctttgcagctgccgattcaaagaagtctcagactaagatacagcctccgtct
ccagcgggttcaggctcaatgcagggtcctcagacacctcagtccaccagcagctccatg
gcagaaggaggagacttgaagccaccaactccagcatctacgccacacagtcagatgccc
cctttgccaggcatcaggagtaactcagtgggcctacaggatgcctttgcagatggtagt
gatcctacgttccagaaacggaactccatgactccaaatccagggtaccagcccagcatg
aatacctccgacatgatgggtcgcatgtcttacgagccaaataaagatccttacagcagt
atgaggaaagctccaggaagcgatcccttcatgtcctcagggcagggccccaacagtggt
atgggtgacccttacaatcgtgctgcaggtccagggatgggtaacatggccatgggacag
cggcaacactattcctacggaggtccttacgacagagtgaggacggagcctggcatggga
cctgaaggcaacttagcaaccggaactccgcagccaaacatcatgccttccaccccggaa
tcggggatgtactctcccagccgctacccgcagcagcagcagcagcagcaaagacatgat
tcctatggcaatcaattctccactcaaggcacatcctcgggcagccccttccctagccag
caaactaccatgtatcaacagcaacagcagaattacaagcgaccgatggatggcagctac
ggcccgcccgctaagcgacacgaaggggagatgtacaacgtaccgtacagcaccgggcag
gggcagacgcagcagcagctgcctccagcacagacccagcaaccgagccagcagcaaact
gcacagccgtctccacagcaggacctgtataaccagtatgggagtacataccctgctgct
gaccgccgatctgccggagggccacagaaccagttcccattccaatttggcagagacagg
gtctcggctcccccaggctccaatgctcagcaaaacatgcctcctcagatgatgggtggt
cccttacagtctactccagagggcccgcagcaaggtgccatgtggcaagggcgcaacgaa
atagggtacagctatccgaatcggcagagcaccggctctgcgccccaggggcctgcttat
cacggagtgactcgaacagatgaaattctgcattcagaccagagggtcaaccatgaggga
ccgtggccttcccacgggaaccggcaacctgcttatggtccctctgcccccgtgccccca
atgactaggcccccccagtctaactaccagaccccccctagcatgcagaatcacattcct
caggtatccagcccagcacctctgcccagacctctggagaatcgcacttctcctagcaaa
tctccattcctgcactcggggatgaaaatgcagaaggcaggaccgccagtccccgcctcg
cacataacaccagcagctgtacagcctcccatgatccggcgagacatcaccttccctccg
ggatcagtagaagctacacaacctgtgttgaagcagaggaggcggctgacagcaaaagat
attggaactcctgaagcctggagagtgatgatgtctctgaagtctgggctgctagctgaa
agtacgtgggccttagataccataaacatcctgctctatgatgacaacagcataatgacc
ttcaacctcagccagctgccaggcttgctggaactcttggtggagtatttccggcgctgc
ctgatcgagatctttggaatcctgaaggaatacgaggtgggagacccagggcaaagaaca
ctattagatcccgaaaggttctgcaaatcttcagcttcctctcatgaagaaggggaggag
gatgatgaaccacggagcctgaactgtgaggaggaagaagaggatgaggaagaggaggag
gctgcgttttcgagcaaggacaaagcacctctagagagcagcgaggaaaaactagttagt
aaatttgacaagcttccagtcaaagttgtgcagaaaaacgacccctttgtggtagattat
tccgacaagttggggcgagtgcaggagtttgaaagcgggctgctgcactggcggattggc
ggcggagacaccaccgagcacattcagacccactttgagagcaagacggagctacctttg
actcataaacgagcttcctgcaactctgtcttgaggaaacgttcagcagctgagagcaat
cccagcaccagggaaggagagactcctccatccgacagctcctcggagaaaaggataact
gccaccatggatgacatgctttcggcacgtccgggctccctggcaggggaggaggaagag
gtcaaagctttggaaacggcgaaagaaagcagcaagtttccctttggcattagtccagct
cagagccacagaaatataaaaattctggaggacgaacctcacagtaaagacgagacgccc
ctctgcaccctcctagactggcaggactctctggcgaagcgctgcatctgcgtctcgaac
atcatcaggagtttatcgtttgtgccgggcaacgactttgaaatgtctaaacatcccggg
ctgctgctgattctagggaaactgattctcttacaccacaagcatccagaacgcaaacag
gcccccctgacctatgagaaagaggaggagcaggaccaaggggtgagctgcaacaaggtg
gagtggtggtgggactgcttggagatgctgcgcgaaaataccctggtcacgttggccaac
atttctggccagctggacctctccccttacccggaaagcatctgtttgcctatcctggat
ggactcctccactgggcagtatgtccgtcagcagaggcccaggatccctttccaacactg
gggcccaatgcggtcctctcccctcagagactggttttggaaacactcagcaaactcagc
atccaggacaacaacgtggatttgattcttgcgactccccccttcagtcgcttggagaag
ctgtacagcaccatggtgcggttccttagtgacagaaagaacccggtgtgtcgagagatg
gctgtggtactactggccaacttggcacagggggacagcctggcagcaagagcaattgct
gtgcagaagggcagcattggcaacttgctgggcttcttggaggacagcctggccgccacg
cagttccagcagagccaggccggcttgatgcacatgcagaacccaccctttgagtcgacg
agcgtggacatgatgcgccgagctgctcgggcgctgctcgccctggccaaggtggacgag
aaccactcggagttcacgttatacgaatcgcggctgttggacatctccgtgtcgcctttg
atgaactctttggtttcacaagttatttgtgatgtactgtttttaattggccagtcatga
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integrated database retrieval system
