KEGG   Rissa tridactyla (black-legged kittiwake): 128918835
Entry
128918835         CDS       T09443                                 
Symbol
PARP4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
rtd  Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03410  Base excision repair
rtd04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:rtd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    128918835 (PARP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    128918835 (PARP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rtd03400]
    128918835 (PARP4)
DNA repair and recombination proteins [BR:rtd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     128918835 (PARP4)
SSDB
Motif
Pfam: VIT PARP VWA_3 VIT_2 VWA VWA_2 BRCT_2 BRCT VWA_CoxE Nucleoporin_FG
Other DBs
NCBI-GeneID: 128918835
NCBI-ProteinID: XP_054079534
LinkDB
Position
1:21795338..21850165
AA seq 1849 aa
MAIFADCVFFVKIKYLPIQDKSRLKACIKENGGVVNFVLNHKSTHVLVDTANVLSCRDLK
NIRKYQLPVLCADFIWKSVEKGKLLQIDAFKVNISQDDTSDQGQDVENLSSSEKKNATKK
NENNYSNLTVIEDSKRRIEAKVRTLRLHGENYQDTSFFPQDFEVAKYSVLEKVKSKESKD
FVVIELQCSQERCKFPFRLYANFSTSDGTKNNKQFVTNTAEEIREKYETFIADLKSQDFL
LRETFPPEAESLASTKLQQLLLEEAIHSSAICQEVSDFVELIWAEAIGHLDSLLLESVNN
ISLNDVSKAEGILLQVKNALNEGAGEVALQEMMMEFYQVIRHKTDIDYKVSKKLLSRKQD
LCQLIRDMLNIRETNMSCPNPSSLAKYRALRCKIEAVDSMSSEFLSVEQQVLKNNYNDCP
VKILKVYRVGRITETAEFLSSVGNIRSLFHASSVRNFMGILSRGLLMPKVVVEDHGLERT
DIGNLGSGIYFSDSVSASIKYSSPSEVDGTRLLAVCDVALGSCLDLYEQDYSLNNAPSGF
DSVHGVRKTADISSDFEDDEFVVYKTCQVKIRYVVKFCLAEDQIKQFQPAVGVELEQGNN
EPESQCHLQQESYELPNANLSNPVKTGLQDRLGNPVPLEGVYIKARIIDFVAQVVMFQTY
TNQNSKPIEAKYVFPLDDKAAVCGFEAFINGKHVIGEVKEKKQAHREYRKAIRQGDGAYL
MDQDAPDIFVISVGNLPPNCTVVIKITYITELSFQHGCITFHLPASVSPLQQDKALNENT
QDTIKKVCVKQVKPQKNGFSLDMSIEMPSSIERIRSWTHELKIKKTDCKAVIKTVEDSSL
DVSGFVLDIWISEVYLPRMWVEKHPNKMSEACMLVFQPEFETAFEEEHQSNEVTILLDCS
NSMAGSALHQAKQIALRVLELLGFRQRVNVVKFGTNFTEFSSFSMNVINDLESLKKFVTS
ATATLGNTDLWKTLRYFNLLFPSQGHRNILLLSDGHIQNESVTFQIVKDNVQHTRLFTCG
VGSTANRHMLRSLSQYGAGAFEYFDLKSKYNWERKIQSQVSRMLSPGCSSVSIKWQQFNT
GAPEPMQAPAQIQSLFNNERLLVYGFIPHCTQATLSAIINDQELQTVVSTTELQKTTGTV
LHKLAARAFINDYEDGILHENETEHEMKKQLLKNMIIQLSLENSIISQFTSFVAVEKRDA
NETCSADAPDILEIIAQEDVDFLPYMDWGQKLMESDSLFAEEFAFDTVTTFNECFTQVNF
NAADFRREKDGAESLQLLLEEVPVSQKSVSPKYTVQDFVNVSELESSICSLKSSFSFDRD
TTKEGSSRTRSPSPQELCLPQAAEPFSLFGFKPKPGGGIDLTQQKSLQTPALKKSHVCAD
APKPAPPPPLPCSFQTSVKGTKQASSSGVAPMQGFVFGSSAPCAAPMQSSGFGSATPCAA
PMQSSGFGSSAPCAAPMQSSGFGSSAPCAAPMQSSGFGSSAPCAAPMQSSFFGSATPCAA
PMQNSGFGSSAPCAAPMQSSFFGSATPCAAPMQSSGFGSSAPCAAPMQSSFFGSATPCAA
PMQNSGFGSSAPCAAPMQSSFFGSATPRAALMQNSGFGSATPRAAPMQNSSFNSVPCSVA
PIRIPVIGSATPAGTNSEKTSIKKQVAPKVPDFQADRKEALQPRCMMKAIRQHDVTPPKE
GLTEALKEQPRCSRTRKKARIQQRIELTSVNWKEMFALQNQDGSWNLSLQLGKILKFDAD
DLINNFLIKKGIQSLGPNGKEKLLQLIATLLVLQFIRCRKELKGIVFKTLMKLDDSTNSS
GVHWACESIKKAIEWVRRAERRFPSICYRLELGKDWDSATQKILGIKFI
NT seq 5550 nt   +upstreamnt  +downstreamnt
atggcaatctttgcagactgtgtgttctttgttaaaattaaatacttacccattcaggat
aagagcaggctgaaagcatgcataaaagaaaatggtggagtagttaattttgtgcttaat
cacaagagtacacatgttcttgtggataccgctaatgtcctcagctgtcgcgatctaaaa
aatattcggaagtatcagctacctgttttatgtgcagatttcatttggaaatcagttgaa
aaggggaagcttttacagattgatgcatttaaggttaatatatcacaagatgacacttct
gaccaagggcaggatgtggaaaacctgtcgtcatctgaaaagaaaaacgccacaaaaaaa
aatgaaaacaactattccaaccttactgttattgaagacagtaagagaagaattgaggcc
aaagtgaggactcttagacttcatggtgaaaattaccaagatacttcttttttcccccaa
gattttgaggtagcaaaatacagtgtccttgaaaaagtcaagtcgaaggaaagcaaagat
tttgtagttattgaattacagtgttcccaagagcgttgcaagtttccgtttcgactatat
gcaaacttcagtacatcagatggaacaaagaataataaacaatttgtaactaatactgct
gaagaaataagagaaaagtacgagacttttattgcagacttaaagagccaggatttcctg
ctcagagaaacttttccaccagaagcagaatctttagcttctacaaaattgcaacagtta
cttctagaagaagccatccattcaagtgctatatgtcaggaagttagtgattttgtggaa
ttgatctgggcagaagctattggccacctggatagtttactacttgaatcagtaaacaac
ataagcctaaatgatgtgagcaaagcagaaggtattttactgcaagtaaagaatgcactc
aatgagggagctggcgaagtggcactacaagaaatgatgatggaattctatcaagttata
cgtcacaaaactgacatagactataaagtttccaaaaagctgttatctagaaaacaggac
ctgtgtcagctaatcagagacatgctcaatatacgtgaaacaaatatgtcatgcccaaac
ccatcatctttggccaaataccgggctctgaggtgcaagattgaagctgttgactcaatg
agttctgaatttctcagtgttgaacaacaagtgttaaaaaacaattacaatgactgtcca
gtgaaaattttaaaagtgtatagggttggcagaataactgaaacagcagaatttctgagc
agtgttggaaacattcgatccttattccatgcatcatctgtgcgcaacttcatgggaatt
ctttccagaggactgctaatgccgaaagtggttgttgaagatcatggcctggaaagaact
gacatcgggaatctgggcagtggcatttacttcagtgattctgttagtgccagtattaag
tattcttcacctagtgaagtggatggaacccggctcctggcagtttgtgacgtggcactt
ggatcctgcttagatttatatgaacaagattattcattaaataatgcaccatcaggtttt
gacagtgtgcatggagtccgtaaaacagcagacatctcttcagactttgaggatgatgaa
tttgtcgtgtataaaacctgtcaggttaaaattagatatgtcgttaagttttgccttgct
gaagatcaaataaaacaatttcagcctgcagttggggtggaactggagcaaggtaacaat
gagccagagtctcaatgtcatttacagcaggagagctatgaattaccaaatgcaaatctt
tcaaatcctgtaaaaactggtcttcaggacagattgggaaatcctgtccctctggaaggt
gtttatatcaaagcgaggataatagactttgtagcacaggtagtaatgtttcagacctac
accaatcaaaacagtaaaccaattgaagctaaatatgtctttcctttggatgataaagct
gctgtttgtggatttgaagcttttatcaatggaaaacacgtcattggagaggttaaagaa
aagaaacaagcacatagagaatatcggaaagctatcaggcagggtgatggagcttatctg
atggaccaagatgcaccggatattttcgtaataagtgtcggaaacttacctccaaattgt
acagttgtgatcaaaatcacctatatcactgaactgagttttcagcatggttgtatcacc
tttcatctccctgcttctgtgtcaccattgcaacaggacaaagcattaaatgaaaacacg
caggatacaataaaaaaggtttgtgttaaacaagtaaaaccacagaaaaatggattttcc
ctggatatgtctattgagatgccatctagtattgaacgcatacgtagttggacacatgaa
cttaaaataaagaaaacggactgcaaggctgtaattaagactgtggaggacagctccttg
gatgtcagtggctttgttctagatatctggatttctgaggtctacctacctcgaatgtgg
gtagagaagcatcccaataaaatgagtgaggcttgcatgcttgtattccaaccagagttt
gaaacagcatttgaagaagagcaccagtccaatgaagttactattttattagattgctcg
aattctatggcaggttcagctctacaccaagcaaagcagattgctttacgtgttttggag
ctacttggtttcagacaaagagtgaacgtagtcaaatttggcacaaatttcacagaattt
tcttctttttcaatgaacgtcataaatgatttagaatcactgaagaagtttgttacatct
gctactgcaacattgggaaacactgatttatggaagaccttacgttacttcaatctgcta
ttcccttctcaaggacaccggaacattcttcttctatcagatgggcacattcagaatgag
agtgtgaccttccagattgtgaaagataatgtccaacatacgaggttatttacatgtggt
gtgggttccacagcaaatcgacacatgctgagatctttgtcccaatatggtgctggagca
tttgaatactttgacctgaaatcaaagtataactgggagagaaagatacagagccaggta
tctagaatgttgtctccaggatgcagttcagtttctattaaatggcaacagttcaataca
ggtgcaccagagccaatgcaggctcctgctcaaatacagtcgttatttaacaatgagaga
cttcttgtctatggattcatccctcactgtactcaggccaccttaagtgcaataataaat
gaccaagaactacagactgtggtgtcaactactgaactacaaaagacaacaggaacagtt
ctacacaaacttgcagcaagagctttcattaatgactatgaggatgggattcttcatgag
aacgaaacagaacatgagatgaagaaacaactcttgaaaaacatgattattcagctcagc
ttggagaactcaattataagccagtttacaagcttcgttgcggttgagaaaagggatgct
aatgaaacttgttctgctgatgctccagacatcctggaaattatagctcaagaagatgta
gattttttaccttacatggactggggccaaaagttgatggaatctgactccttatttgca
gaagaatttgcctttgacacagtaactacgttcaatgaatgtttcacacaagtaaacttt
aatgcagctgacttccgaagagagaaggatggagctgaaagcttacaattgctactggaa
gaagttcctgttagtcaaaaaagcgtgtcaccaaaatacacggtgcaggactttgtaaat
gtttctgaacttgaaagtagtatttgcagtctcaaatcaagtttcagttttgatagagat
accacaaaggagggatcatcgagaacaagatcaccttcaccacaagaactttgtctgccg
caagctgctgaacctttctcattgtttggttttaaacctaagccagggggaggaattgat
ctgactcaacaaaaatcacttcagacacctgcacttaaaaaatcacacgtctgtgcagat
gctcctaaacctgctcctcctcctccccttccctgttcttttcaaacatcggtgaaaggc
acgaaacaagctagttcttctggtgttgctccgatgcagggctttgtatttggttcatct
gccccttgcgctgctccgatgcagagttctggatttggctcagccaccccttgtgctgct
ccgatgcagagttctggatttggttcatctgccccttgtgcagctccgatgcagagttct
ggatttggttcatctgccccttgtgcagctccgatgcagagttctggatttggttcatct
gccccttgtgctgctccaatgcagagttctttctttggctcagccaccccttgtgctgct
ccgatgcagaattctggatttggttcatctgccccttgtgctgctccaatgcagagttct
ttctttggctcagccaccccttgtgctgctccgatgcagagttctggatttggttcatct
gccccttgtgctgctccaatgcagagttctttctttggctcagccaccccttgtgctgct
ccgatgcagaattctggatttggttcatctgccccttgtgctgctccaatgcagagttct
ttctttggctcagccacccctcgtgctgctctgatgcagaattctggatttggttcagcc
acccctcgtgctgctccgatgcagaattcttcatttaattcagttccctgttctgttgct
ccgatacggattcctgtaattggttcagctacccctgcaggcacaaattctgaaaagact
agtattaaaaaacaagttgctcccaaagttcctgattttcaagctgatagaaaagaagca
ttgcaacctaggtgtatgatgaaggcgatacgtcagcatgatgttacgcctcctaaagaa
ggacttactgaggcacttaaggaacaaccacggtgctctagaacaagaaagaaagcaagg
attcaacagagaattgagttgacttctgtgaactggaaagaaatgtttgcactccaaaat
caggatggctcttggaatctcagtctacagttgggaaaaatcttgaagtttgatgctgat
gatttaattaacaatttccttattaaaaaaggcattcagtcacttggcccaaatggaaaa
gaaaagctactgcagttgattgctactcttcttgtgctacagttcatacgctgcagaaag
gaattgaaagggatagttttcaaaactctgatgaaactggatgattcaactaattcaagt
ggtgttcattgggcttgtgagtcgatcaagaaagcaatcgagtgggtaagaagagctgaa
aggcgatttccatctatttgctatcgacttgaacttgggaaagactgggattctgccacc
cagaagatattgggtatcaagtttatctaa

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