Rissa tridactyla (black-legged kittiwake): 128918865
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Entry
128918865 CDS
T09443
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03013
Nucleocytoplasmic transport
rtd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128918865 (SRRM1)
03015 mRNA surveillance pathway
128918865 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128918865 (SRRM1)
03041 Spliceosome [BR:
rtd03041
]
128918865 (SRRM1)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128918865 (SRRM1)
Spliceosome [BR:
rtd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
128918865 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
BAF1_ABF1
Motif
Other DBs
NCBI-GeneID:
128918865
NCBI-ProteinID:
XP_054079596
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All DBs
Position
18:3635717..3657510
Genome browser
AA seq
893 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRSYSPRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSS
SSSSSSRSRSPPKKPPKRTVSSPPRKMRRLSPSASPPRRRHRPSPPASPPPKPRRSPTPQ
QSNRARKSRGSVSPSRSSAPKHKSTEKRESPSPAPKQRKAELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKES
SPRRRRRSPSPPPARRRRSPSPAPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQR
RYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPAAKRRSPSISSKHRK
GSPPSRSNRETRSPPQNKRHSPSPRPRASHTSASPPPPRRGASASPQRRQSPSPSTRPIR
RVSRTPEPKKTKASTPSPRSARRVSSSRSASGSPEPAPKKHQGPPSPARSRSPSANWSPA
KKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAAAAAAAAVA
VADTTSAQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggggttcttccgcggaacaagtgcagaacaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaaatttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctgttaagtgcacaagaaaacattgctggtattcca
actgcgtttctggaactgaagaaagaagaaataaaacagcgacagatagagcaagagaaa
ctggcttctatgaagaaacaagatgaagacaaggagaagagggataaggaagacaaagat
aacagggaaaaaagagacagatccaggagtccaagaagacgcaaatcaaggtctccttcc
cctcgaaggaggtcgtcgcctgtcagaagagagcggaaacgcagccattctcgctctcct
catcacagaaccaagagccgtagtgctactcctgcaccagaaaagaaagaggcgactcct
gagcctgaaccctctgtgaaaccaaaggagactgttgttcaagaggcaacttcaaacagt
gatatcccaaaagctcctaaacctgaacctcctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggaaaaagagaagactcgtcaaagatcccca
actcggtccaagtcaaggtcaagatctcgatcacgttctccatctcattctcgaccaaga
aggcgtcatagatcacggtcaaggtcttactcccctagaaggcgaccaagcccaagacga
cggccgtctccaaggagaaggagccctccaaggcgaatgcctcccccacccagacacaga
agaagcagatcccctgtgaggcggagaagacggtcatcagcatccttatctggcagtagc
tcttcctcctcctcctcacgttcccgatcaccaccaaagaaaccacctaaaagaactgta
tccagtcctcctcgtaaaatgcgtaggctctctccttcggcaagccctcctaggcggagg
cacagaccatccccaccagcaagtccacctccaaaaccacgtaggtctccaacaccccag
cagtcgaatcgtgcaagaaaaagccgtggctctgtttcgcccagcagatcatcagcaccc
aaacataagagtactgaaaaaagagaatctccttcgccagcaccaaaacaaaggaaagca
gaactgtctgaatcagaagaagacaaaggcggtaaaatggctgcagcagactctgttcaa
cagaggcgtcagtacaggaggcaaaatcaacagtcttcatctgattctggttcttcatct
tcatctgaagaagaaagacctaaaagatccaatgtgaagaatggggaagttggtagacgc
cgacgccattcacattcacgcagtccctcaccgtctccacgaaaacgacagaaggaatcc
tcccctcgtaggaggaggagaagtccatcgcccccaccagccaggcggcgacgctctcca
tcaccagcccctcctcctaggcggcggcggtcaccttcattacctcgtcgaaggtctcca
tcaccacccccacgcagacgctcaccttctccacggagatactctccaccgatacagaga
cgatactctccttctccaccacctaagagaagaacagcctctcctccccctccgcctaaa
agaagggcatcaccttctccacagtcaaaacgcagagtctcccattcgccaccgccaaaa
caaaggagctcgccagccgctaaaaggcgttcaccttcgatatcttccaagcacaggaag
ggatctcctcccagtaggtccaatcgggaaacacgttctccaccgcaaaacaaaaggcat
tcaccttcaccacggcctagagcttctcatacctctgcaagcccaccaccaccacgaagg
ggagcttcagcttcaccccagagaagacagtctccatctccaagcactagacccatcagg
agggtgtcaagaacgccagaacctaagaagacaaaggcttccacgccaagtccacgatct
gcgagacgggtgtcttcatcacggtctgcatcaggatcacctgagccagcaccgaaaaaa
catcaaggacctccatcccctgctcggtctcgttccccttctgccaactggtcacctgca
aaaaaggctaaaagcccaactcagagcccatcacctgcaaggaactcggatcaagaaggg
ggtggaaagaagaagaagaaaaagaaggataagaagcataaaaaggataaaaagcacaag
aaacacaaaaaacataagaaggagaaggctgcagcggctgcagcagctgctgctgtggct
gtagctgataccacctcagcacaggaagaccaggaagcagagacagaacccaaaaaggag
acggaaagtgaacccgaagacaaccttgatgatctagaaaaacacctgcgggagaaggca
ctgaggtcgatgaggaaggcgcaagtgtcaccaccatcctag
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