Rissa tridactyla (black-legged kittiwake): 128918966
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Entry
128918966 CDS
T09443
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128918966 (ZC3H12A)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128918966 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
128918966
NCBI-ProteinID:
XP_054079841
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All DBs
Position
18:2636727..2645650
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AA seq
664 aa
AA seq
DB search
MSAGSLSALPGWPEALPAASPPASRLAERMSGREPSESRGPGGLPGAEPPEEAGSPGREP
CDPAEMQLKVDFFRKLGYSSGEIHVVLQKLGLNADTNTVLGELVKHGPAEREGGEAPPET
KEAPLVPRGGAANKSPAPPPAPEETESENLKPIVIDGSNVAMSHGNKEVFSCRGILLAVQ
WFWDRGHKDITVFVPSWRKEQPRPDVLITDQYILRDLEKKKILVFTPSRRVGGKRVVCYD
DRFIVKLAHESDGIVVSNDTYRDLQNERPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHG
PSLDNFLRKKPVVPEHKKQQCPYGKKCTYGIKCKFYHPERINQPQRSLADELRANARLSP
TRSTSAKEEKKGKRGSQAEFLCSVPTESDKSSLQKVSAERKSLTHKAKPGDVPLQVKGGV
SGSVPPNSGNHRASDRYQQPHMDSLSYISQEHLDSGIGSLENQLSDMWPYRCTSHCDHSH
ADQVAVCTCGRQRPVYPHSPSLEQNGLVSYKHGSHKSSSSGASFLQYSPEISHSGPPHSF
SGYGVPVHPANAGQYSLPNDYNTPPPHSREYWSEPYQMPSPQVRSPSVRDPRSVQRAPGP
AYGDSCQWAVSDQFAEERANVHVKLCGIFHPHLVDAVMSRFPQLLDPQRLAAEILTYKSQ
NPGI
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggcagcctctccgccttgccgggctggcctgaggcgctgccggccgccagc
ccgccggcgtcccggctcgcagagaggatgagcggcagagagccgagcgagagccgcggc
cccggcggcctgcccggcgccgagccgcccgaggaggcggggagccccgggcgggagccc
tgcgaccccgccgagatgcagctgaaggtggacttcttccgcaagctgggctactcctcc
ggggagatccacgtcgtgctgcagaagctgggcctcaacgccgacaccaacacggtgctg
ggggagctggtgaagcacggcccggccgagcgggagggcggcgaggcccccccggagacc
aaggaggccccgctggtcccccgggggggtgccgccaacaagagccccgcacctccgccg
gccccggaggagacggagagcgagaacctgaagcccatcgttatcgatggcagcaatgtg
gccatgagccatggaaataaggaagtgttctcctgccgaggtatccttctggctgtccag
tggttttgggacaggggacacaaggatattacggtctttgtgccatcttggagaaaggag
cagccacgaccagatgtactcataacagaccagtacattctccgtgaccttgaaaagaag
aaaattctggtcttcactccttccaggcgggttggaggcaagcgtgttgtctgttatgat
gatagattcattgtgaaactggcacatgagtcggatggcattgtggtttctaatgatact
tatcgggacctgcagaacgagcgtcctgagtggaagaagttcattgaggagcgtctactg
atgtactcctttgttaacgacaagtttatgcctccagatgatcccttagggcgacatggc
cccagcctggataactttctcagaaagaaacctgttgtgccagaacacaagaaacaacag
tgcccttatgggaagaaatgcacttatggaattaagtgtaaattctaccaccctgaaagg
atcaatcagccccagcgctcattagctgatgaactccgagccaatgcaaggttgtctcct
accagaagtaccagtgccaaggaggagaaaaaaggcaaaagaggttcccaggcagagttc
ttgtgctctgtgcccacagagagtgataaaagctctttgcagaaggtctctgcagaaagg
aaaagcttgacccacaaagcaaagcctggcgatgttccgcttcaggtcaaaggcggtgtg
tctggcagtgtgccccctaacagtgggaaccacagggcctctgacaggtaccagcagcct
cacatggactctctgtcttatatatctcaggagcatctcgactcaggcattgggtctctg
gagaaccaactgtctgacatgtggccttacagatgtaccagtcactgtgatcattcccat
gccgatcaggtggcagtctgcacctgcggtaggcagagacctgtctacccacattctccc
agcttagagcaaaatggtctggtctcttacaagcatggttcccataagtcttcttcctct
ggtgctagcttcttgcagtatagccctgagatatctcactcaggacctcctcactctttc
tcaggctatggagtacctgtacacccagctaatgctggccagtacagtctgcccaatgac
tataacacccctccaccccattctcgcgagtactggtctgaaccataccagatgccgtct
cctcaagtgagatctccgagcgtgcgagatcctcgttcggtacagagagccccagggccg
gcatatggggactcctgccagtgggctgtctctgaccagtttgcagaggagcgggccaat
gtgcacgtcaagctgtgtggcatattccatccccatttagttgatgctgtgatgagccgt
ttccctcagctgctggatccccaaaggcttgctgcagagatactaacgtacaagtctcag
aacccgggtatatga
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