Rissa tridactyla (black-legged kittiwake): 128919603
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Entry
128919603 CDS
T09443
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128919603 (TIA1)
03041 Spliceosome [BR:
rtd03041
]
128919603 (TIA1)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128919603 (TIA1)
Spliceosome [BR:
rtd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128919603 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Calcipressin
Nup35_RRM_2
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
128919603
NCBI-ProteinID:
XP_054080940
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All DBs
Position
20:8145549..8163895
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AA seq
372 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGR
ISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKS
TYESNAKQLSYDDVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETPDMVSPVQQNQIGYPPAYGQWGQW
YGNAQIGQYVPNGWQVPAYGMYGQAWNQQGFNQTQSSAAWLGASYGVQPPQGQNGSVLAG
QSGYRVAGFEAP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaaatgcccaagaccctgtacgtggggaacctgtcaagagacgtgacggaa
gctctgatcctccagctgttcagccagatcggaccatgcaaaaactgcaaaatgataatg
gatacagctggaaacgatccgtactgttttgtggagttctacgagcaccggcacgcggct
gcagcgctggctgctatgaacggccggaagataatgggtaaggaggtcaaagtgaactgg
gcgacgacccccagcagccagaagaaagacaccagcaaccatttccatgtctttgtcgga
gacctcagcccagaaattacaacggaagatataaaagcagcttttgcgccgtttggaaga
atatcagacgcgcgggtggttaaggacatggcgacgggcaaatcgaaaggatacggcttc
gtttccttcttcaataaatgggacgcggagaatgccattcagcagatgggcgggcagtgg
ctcggcggaaggcaaatccgaacgaactgggcgacgagaaaacctccggctccaaagagc
acgtatgaatcaaacgccaaacaactctcttacgacgatgtggtcaatcaaagcagcccc
agcaactgcaccgtctactgcggcggcgttacctccggcctcacagaacagctcatgcgc
cagaccttttctcccttcgggcagatcatggaaattcgagtcttcccggataaaggctac
tcctttgtacggtttaattctcacgagagcgcggcgcacgccatcgtttccgtcaacgga
acgactatcgaaggacacgtggtgaagtgctactggggcaaggagacgccggacatggtc
agccccgtccagcagaaccagatcgggtacccgccggcgtacgggcagtggggccagtgg
tacggcaacgcccagatcggccagtatgtgcccaacggctggcaggtccccgcctacggc
atgtacggccaagcgtggaatcagcagggatttaaccagacgcagtcctcggcggcgtgg
ctgggggcgagctacggggtgcagcccccccaggggcagaacggcagcgtgttggcgggg
cagagcgggtaccgcgtggccggcttcgaggcgccctga
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