Rissa tridactyla (black-legged kittiwake): 128919658
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Entry
128919658 CDS
T09443
Symbol
NEFM
Name
(RefSeq) neurofilament medium polypeptide
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtd04812
]
128919658 (NEFM)
Cytoskeleton proteins [BR:
rtd04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
128919658 (NEFM)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
ATG16
ATG14
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
128919658
NCBI-ProteinID:
XP_054081043
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Position
20:6436490..6440655
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AA seq
842 aa
AA seq
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MSYTMEPLGNPSYRRVTETRATYSRASASPSSGFRSQSWSRGSGSTVSSSYKRPNLGGPR
AAYGSTVLSSAESLDVSQSSLLNGAAELKLSRSNEKEQLQGLNDRFAGYIEKVHYLEQQN
KEIEAELAALRQKHAGRAQLGDAYEQELRELRGALEQVSHEKAQIQLDSEHIEEDIQRLR
ERFEDEARLRDETEATIRALRKEMEEASLMRAELDKKVQSLQDEVAFLRGNHEEEVAELL
AQLQASHATVERKDYLKTDLTTALKEIRAQLECQSDHNMHQAEEWFKCRYAKLTEAAEQN
KEAIRSAKEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNNDLTTYQDTIHQL
ENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSAFSGSITGPIFTH
RQPTVTIASTKIQKTKIEPPKLKVQHKFVEEIIEETKVEDEKSEMEDALAAIAEEMAAKA
QQEEQEEEKAEEAAEEEAVAEKAAAEQAAAPEEEEKEEEEAEEEEEAAKSDAAEEGGSEK
EEIEEKEEGEEAEEEGEEAEAKGKAEEVTAKVEKVKTPPSKSPPKSPPKSPVAEPAKAVQ
KETAAEAGKEQKVEKGGEKPAKGEEKAASPEKPATPKVTSPDKAATPEKPVTPEKPATPE
KAATPEKPRTPEKPVTPEKPRSPEKPATPEKPRSPEKPASPVKDEKAVVEETITVTKVTK
ISAEVEKEARKEDIAVNGEVEEKKEEEESKEKEVEEEDKGVVTNGLDVSPSDDKGEKIVV
TKKAEKITGEGGDSTTTYITKSVTVTQKVEEHEESFEEKLVSTKKVEKVTSHAVVKEVKE
TE
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaccatggagcccctgggcaacccctcgtaccgccgggtgaccgagacccgg
gccacctacagccgggccagcgcctccccgtccagcggcttccgctcgcagtcgtggtcg
cggggctcgggcagcaccgtctcctcctcctacaagcgccccaacctgggggggccgcgg
gccgcctacggctccacggtgctgagctcggccgagagcctggacgtgagccagtcctcg
ctgctgaacggggcggccgagctgaagctgagccgctccaacgagaaggagcagctgcag
gggctgaacgaccgcttcgccgggtacatcgagaaggtgcattacctggagcagcagaac
aaggagatcgaggcggagctggcggctctgcggcagaaacacgccgggcgggcgcagctg
ggcgatgcctacgagcaggagctgcgggagctgcggggggccctggagcaggtgagccac
gagaaggcgcagatccagctggattccgagcacatcgaggaggacatccagcgcctgcgg
gagcgcttcgaggatgaggcgcggctgcgcgacgagacggaggccaccatccgcgccctg
cgcaaggagatggaggaggcctcgctgatgcgggcggagctggacaagaaggtgcagtcg
ctgcaggacgaggtggctttcctgcggggcaaccacgaggaggaggtggccgagctgctg
gcgcagctccaggcgtcccacgccaccgtggagaggaaggactacctgaagaccgacctg
accacggcgctgaaggagatccgcgcccagctggagtgccagtccgaccacaacatgcac
caggccgaggagtggttcaagtgccgttacgccaagctgacggaggcggcagagcagaac
aaggaggccatccgctccgccaaggaggagatcgccgagtaccgccggcagctccagtcc
aagagcatcgagctggagtcggtgcgcggcaccaaggagtcgctggagcggcagctcagc
gacatcgaggagcgccacaacaacgacctcaccacctaccaggacacgattcatcagctg
gagaacgagcttagaggaacaaagtgggaaatggcacgtcacttgagggaataccaggac
ctcctcaatgtcaagatggccctggatattgaaatcgctgcatacaggaagctactggag
ggtgaagagacaagattcagtgccttctctggaagcattactggacccatattcacacac
agacaacccactgtcacaatagcatccactaaaattcagaaaacaaaaattgaaccacca
aagctgaaggtccagcacaagtttgtagaagaaatcattgaagagacaaaagtagaggat
gagaagtctgaaatggaagatgccctagccgctattgcagaagaaatggcagccaaggcc
cagcaagaagaacaggaggaagaaaaggcagaagaagctgcagaggaagaagctgttgcc
gagaaggctgctgcagaacaagcagctgcacctgaggaagaagagaaggaggaagaagaa
gcagaggaggaagaagaagctgcaaaatctgatgcagcggaagaaggaggatctgaaaaa
gaagaaatagaggaaaaggaagaaggggaggaggctgaggaagagggagaagaagccgag
gccaagggcaaagctgaagaggtaacagcaaaggtagaaaaggtcaaaacgcctccctca
aagtcccctcctaaatccccccctaaatcccctgtagcagagccggccaaggctgtccag
aaagaaacagctgcagaagcaggaaaggaacagaaggtggagaaaggtggtgagaaacca
gccaagggggaagagaaagcagcatctccggagaagccagcgacaccaaaggtaacctct
ccagacaaggcagcaaccccggagaagcctgtgacaccggagaagccggcaaccccggag
aaagccgcaacgccggagaagccccgcaccccagaaaagccagtgaccccagaaaagccc
cgctctccagagaagccggcaactccggagaagccccgttctccagagaagccagcctcc
ccggtcaaagatgaaaaggctgtggtggaagagaccatcactgtcacaaaggtaacaaaa
attagcgcagaggtagagaaggaggccaggaaagaagacatcgcagtgaacggtgaggtg
gaggagaagaaggaagaggaggaatccaaagagaaggaagttgaggaggaagacaaggga
gttgtcaccaatggcctagatgtgagcccaagtgatgacaagggtgagaaaattgtagtt
accaaaaaagcagagaaaatcactggtgaaggtggggacagtacaaccacatatatcaca
aagtcagtgacagtcacccagaaggtagaggaacatgaagaaagctttgaggagaaacta
gtgtccactaagaaagtggagaaagttacttcacatgccgtagtaaaagaggttaaagag
accgaataa
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