Rissa tridactyla (black-legged kittiwake): 128919668
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Entry
128919668 CDS
T09443
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Pathway
rtd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128919668 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128919668 (LSM1)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128919668 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
128919668 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
128919668
NCBI-ProteinID:
XP_054081067
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All DBs
Position
20:4193673..4197053
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRLEQQAKQESEKLKVQALKER
GLSVPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcacggccagcctcatccaggatatcgacaagaagcacctggtc
ctgctgcgggacggccggacgctcatcgggtacctgcgcagcatcgaccagttcgcaaac
ttggtgttgcaccagactgtggagcgcatccacgtgggcaagaagtatggggacatccct
cgaggcatctttgttgtgagaggcgagaacgttgtgctgctgggggaaatagacctggag
aaggagagtgacacgcctctgcagcaggtctccatcgaggagatcctggaggagcagcgt
ctggagcagcaggccaagcaggagtcggagaagctgaaagtgcaggcgctgaaggagcgg
ggcctctcggtcccgcgcgcggataccctggacgagtactag
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integrated database retrieval system
