Rissa tridactyla (black-legged kittiwake): 128919669
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Entry
128919669 CDS
T09443
Symbol
ZC3H12C
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X2
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
rtd
Rissa tridactyla (black-legged kittiwake)
Brite
KEGG Orthology (KO) [BR:
rtd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtd03019
]
128919669 (ZC3H12C)
Messenger RNA biogenesis [BR:
rtd03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
128919669 (ZC3H12C)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
128919669
NCBI-ProteinID:
XP_054036720
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All DBs
Position
1:21312801..21361869
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AA seq
857 aa
AA seq
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MGLKDHLGHDLGHLYVGSTGTQINAIVPWSMAEKPTMDKVNSRKEDVDKEASEETSGSSS
CDSEESTNSDNDSERLNNSASESHLLPKTHRQLCRSPCLEPHILKRNEILEDFRIEEAQI
VPKEVKKPPDVVKEYQTKLEFALKLGYSEEQVQLVLNKLGTDALINDILGELVKLGNKTE
TDQTVTNANTTVMREASSIESQRSESPLQEDVTEDGDNLRPIVIDGSNVAMSHGNKEVFS
CRGIKLAVDWFLERGHKDVTVFVPAWRKEQSRPDALITDQEILRKLEKEKILVFTPSRRV
QGRRVVCYDDRFIVKLAFESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMP
PDDPLGRHGPSLDNFLRKKPIVPEHKKQPCPYGKKCTYGHKCKYYHPERGNQPQRSVADE
LRAMSRSTAAKTTSEGGLVKSNSVPCSTKNDGTSELKRATPKRQSDPSIRTQVYQDLEEK
LPTKNKLETRSVPSLVSIPSSSAAKPQSTAPLTNGLPSGVHFPPQDQRPQGQYPTVMMAT
KNHGTPMPYDQYPKCESPVDVGYYSMLSAYSNLSMSGPRSPERRFSLDTDYRISSVASDC
SSEGSVSCGSSDSYVGYSDRSYMSSPDPQLEENLKCQHMHPHGRLNTQPFLQSYHEPLTR
VQSYSHEEPKHHHKPPIPYMAVHLQHPTVGARSSCPNDYSASQSSSHSKTMHLGRALVST
RIDSISDSRLYDNSPLRHRKPYSGQDGLGSWDRQSYGMDAYGYRQTYSLPSNPTQPCYEQ
FAFQSLPEQQDQTWRVPYCGIPQDPPRHQDTREKVYINLCNIFPPDLVRIVMKKNPHVTD
AQQLAAAILVEKSQLGY
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaaggatcatctggggcatgacttaggccacctttatgtggggagcactggc
acacaaataaatgcaattgtaccttggtcaatggcggagaagccaacgatggataaggtg
aattctaggaaagaagatgtggacaaggaggcatctgaagagacttctggaagctccagc
tgtgactctgaagaaagtacaaattctgataatgattcagagagactgaacaattctgca
tcagaatcacatttattgcctaagactcaccggcagctgtgccgatctccttgcttagag
cctcatatactgaaaagaaatgaaatcttggaagactttaggatagaagaggctcagata
gtacctaaggaagtcaaaaagccccctgatgtagtgaaagaatatcaaaccaaactggag
tttgcacttaagttgggttactctgaagagcaggttcaacttgtactaaataaacttggt
actgatgctttaataaatgatattttgggagaacttgtcaaacttgggaataaaactgag
actgatcagactgtaactaatgctaacactactgtaatgcgtgaagcgtcttccatagag
tctcagaggtcagagtctccactgcaggaggatgtgacggaggatggtgacaacctgagg
ccaatagttattgatggcagcaatgttgcgatgagccacgggaacaaagaagtattttcg
tgtcgaggaatcaaattggcagtagactggtttttggagagaggccacaaggatgttaca
gtgtttgtgccagcatggaggaaagaacagtcgagacccgatgctcttatcacagatcaa
gaaatcttgcgtaaattagaaaaggagaagattcttgtgttcacaccatcccgccgagtg
caggggagaagggtggtatgctacgatgaccgatttatagtgaagttggcctttgagtca
gatggcatcattgtttctaatgataactacagggatctagctaatgaaaagcctgaatgg
aagaagttcatagatgaacgcttgctgatgtattcatttgttaatgacaaatttatgcct
cctgatgatcctcttggccgccatggtccaagtctggacaattttcttaggaagaagcct
attgtgccagaacataagaagcaaccatgtccatatgggaagaagtgtacctatggacac
aaatgcaaatactatcatccggaaagaggaaatcagcctcagcgatctgtggctgatgag
cttcgtgccatgtctagaagcacagctgccaaaactacaagtgaaggaggactggtaaaa
agcaatagtgttccctgcagcacgaaaaatgatggcacttctgagctgaagcgtgctact
ccaaagaggcaatcagatcctagtataaggactcaagtctatcaagacttggaggaaaag
cttcccaccaaaaacaaattggaaaccaggtctgtaccttctttagttagtataccaagt
tcctctgctgcaaaaccccaaagtactgcacctttaactaacggccttccctccggagtt
cacttcccacctcaggatcaaagaccacagggacagtatcctacagtgatgatggcaacc
aaaaatcacggaacgccaatgccttatgaccagtatccaaaatgcgagtctcctgtggat
gtagggtattactctatgctgagtgcatattcaaatctaagtatgtctggtccacgtagt
cctgaaaggcgcttctccttggacacagattataggattagctctgtagcttctgactgc
agcagcgaagggagcgttagctgtggcagtagtgattcctacgtgggttacagcgaccgc
tcttacatgagttcgcctgacccacagctagaggagaacttgaagtgccaacatatgcac
ccccacggccgccttaacactcagcccttcctacagagctaccacgagcctctcacacga
gtgcaaagctatagtcatgaagaaccaaagcatcaccacaaacctccgattccgtacatg
gctgtgcatctacagcatccaacagtcggtgctcgttctagttgtccgaacgactactct
gcatctcagagttcgtcacattcaaagacaatgcatctggggagagccctcgtgtccacg
agaatagacagcatttcagactcgcgtttatatgataattctccactaagacacagaaag
ccttattctggccaagatgggcttggaagctgggataggcagagttacgggatggatgcc
tatggctaccgccagacctactccttgccgagtaaccccacgcagccgtgttacgagcag
tttgccttccaaagcttacctgaacagcaggaccagacctggcgcgtaccttactgtgga
atccctcaagaccctccaaggcaccaagacacccgggagaaggtttacataaatctctgc
aacatcttcccccctgatcttgtgaggatcgtcatgaagaagaaccctcacgtgacggac
gctcagcagctcgctgcagccatcttagtggaaaaatctcagctaggttattga
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