Rathayibacter tanaceti: GSU10_00295
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Entry
GSU10_00295 CDS
T06377
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rte
Rathayibacter tanaceti
Pathway
rte02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GSU10_00295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA14
RHS_repeat
DUF1889
Motif
Other DBs
NCBI-ProteinID:
QHC54246
UniProt:
A0AAE6V6E8
LinkDB
All DBs
Position
64506..71657
Genome browser
AA seq
2383 aa
AA seq
DB search
MTGLRHSLGHFPASVGLLLRVRLLHVSGGRVARRRVRLLVVPVLAGLLSAVLTVTSVDAA
SATAMTQISAELSAEQAAAAESSGTADLDEVPLEASDPAAPPALSALVPEDGDVPVGDAT
AQPTEEPTATSTAVPTEGASPGDVDDFDASTATVVDRDEFTTTYAFGNSQQVTDVSLTPS
AVETSKGEWVPVETELETTGPASWLGQGGAEVDVHPLEPSFAEHADDAPVLSMNRGGHSI
GFTLRGADHSVLERDLSPWADSSAKSHLEYKDVFKGVDLVYDVETSNVKENLRLESAPEA
GKASWTWEVDAPGLAAAKDDLGNIVFSDQSGATVFAMPAPILWDSSGTEKKADADAEGAV
ALVQEGSKTLLTISASQAWLHDPKRVYPVYVDPTTETTIKDVAAFKSNGQTNSGMTQVGN
TNSNGVWRSIAHFNYESVVAGKQVVGANIGVTNIVDGTTGTYAGGVHDVTSYGFNGAGVQ
LASLSISERGGETGWDGRLGSKLAEWARNGVSGGNLLIGGDERGGVYSYRWIDVHLWLET
KDFPRAGWNPLPADKLENQTLTPTLHADAEYDPTTSGLDHLYRVSTNPNPEISPIYDTGW
GAGADQKIPAGYLNPNTWYYWHTFVKDNADGYYGTSTVAVSQTWSFKTTDPPVPQQSTTS
PSDKSVIVSTTPRLQVGAIGNANLKEYAFRIATGADATTGQVATSGWRTDPWWDVPPSIL
QDGSTYTWTVLTRDKSNNEWGPFWVNRLTVNQRITNSGPAPTDSAGPATVNLANGNVSMG
FSSPTVATIGGDIGMSFTYNSKKTVNNGLTGRYYNYTGTGVPPSDFSGTNIKQILQRTDS
QLNFDWGGGSPGDGVNSDNFMARWSGFLRVPDAGPWEFATSRDDGVIVTVGTANGGAGTK
VVDRWDAAHQDPVWGGASATITGAVPIDVKYFEQATDASLKLYIRKVGTTSASLIPADWV
TATRSVLPGGWSGSTPLVGDLQTYAKAEVKEGSIVFTDIDGDTHTYTKKSAGGYSAPAGE
SGVAAIDANGAASLADGAGVVTVFNRDGAVSAVTSPDDTKKPTAPVVSYRADGLVDRISD
RLSGSTSGSTTTYARSVRFIYQGDTAASLGLDTGENWPGTQNLCPTDSSSTSAYVAAPTG
MLCRILYPNHTANSFINDTALLYDASGNLVRINDPGNEVTTFVYDGSGRVTAVRDSLSND
WITNVSPGSSGLATTRTEISYDSAGRPVTVTLPAPDGVTQSTRPSKTYNWPAAGGDTTTV
DVAGLTVPNSGTSNGHAVTVKYDSAYRTLSSKTASGLESLTEWTSSDLQLSSTNPQGLKS
TVFYDYANRPYDNYGPAPTACFAGNKPTSSCSGTGHSTTTYDGDLNGLSASYYGNNQLSG
VPVGYGLGQESTGKIAVDWGAGAPAGISSDQFSARYTGSITIPTAGDWYFKTIADDGTRL
WIDNVLKIDDWVSQSQHWSVPGRIHTDADNTVLPIRLDYLDNGGDAHLELNWSQSPNTDF
TWVPGAQMKPDYGLTTSTTTDDKFSVSNTMSDGTSAPNGVAASTSAVSSSTVSTNYGSEP
WLGLSTSSTVDPAGLALSTKTDYETDGYNRRTGKTLPAATSAGATAASAGTTFAYYGDKD
TYGPALGTTSAVCGLALTTPQFGMLKQTTNAKYGGSANSVSTQYIYDIMGRVVGAKQSGD
SAWTCTTYDARGRNAAVAYPKTGTIAARTVTTSYTSDGTSSGDPRTTAVTDSSIAASPTA
GKVTTTTDLLGRAVSYADVWGLTTATTYDLVGNVIQTQTKKISSIVSVQTFEYDLDSRVT
RVKRGGADLATVTYGPADAASLLDRGQVTAVSYPAASAGNGTNLGSIVRSNRTGAQVGLT
WNFPAGRTSNLTDTVLRSQSGRIVQDTITDAGNLSQANYNFDAAGRLIKAIIPNHNLTYG
YGDSSCNTASYPGAIVRAGKNGNRTSYTDVATLPTGTATTTTAYCYDSADRLLGSTISSG
VAATGANAVADGLSSSEVKYDEGGNTVTLGDEAMTYDAADRHLSTVTPTGAATYQRDAFD
RIVSRNQTIAGNSSEVRYGFEGGSDTPDFILDSSNNLMEEIVSLPGGVVATIPVSGSEIW
AYPNLHGDIIVTADGAGVRAKNSAGALLPAALYDPYGQVVDPTTKLIGTVAADDSIPNTQ
SRTDADYGWLGQHQKLSEHIGSISTIEMGARQYVAAIGRFLEVDPEEGGVQNDYVYPVDP
INMFDLDGRAFNWGLAIDIGLTVLMFVPGLGAAAAVARVAVIAVRVYKAAAMVERGGAAA
NALIRTGVRASGFLGRVGSRVGGRVYTGATRRSVSNNGRGYNYTSRDGLRQWRSPQFKPL
PQRLGGGYQWTSNTGYSRTGNLNPGSNNLRNLHIYHGGSRWRP
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggtctgcgacattctctcggccattttcctgccagtgttgggctgctcctcagg
gtgaggctgcttcatgtctctgggggtcgtgtggctcgtcgtcgcgtccgcttgctggtt
gttcctgttctggcaggactactaagcgctgttctgaccgtcacgagcgtcgatgcggcg
tccgcgacggcgatgacgcagatctctgcggagctcagtgctgagcaggccgcagcggcg
gaatcctcgggaacggctgacctcgatgaggtgccgctggaagcgtccgatcctgccgcg
cccccggcgctctctgcgctcgtgccggaggacggcgacgttccggtcggggatgccact
gctcagccgacggaggagccgacagcgacgtccacggccgtgccgaccgagggagcgtcc
ccgggtgatgtcgacgacttcgacgcgtcgacggcgacggtcgttgatcgggacgagttc
acgaccacatatgcgttcggtaacagccagcaggtcacggatgtctcactgacgccgtcc
gcggtggagacgagcaagggcgagtgggttcccgttgagacggagctcgagacgactggt
ccggcttcgtggttggggcagggcggtgccgaggtggacgtgcacccgctcgagccgtcc
tttgctgagcacgccgatgatgcgcctgttctgtcgatgaacaggggcggccactcgatc
ggtttcactcttcgcggagccgaccacagcgttctcgagcgtgatctttctccgtgggcg
gacagctcggcaaagagtcacctcgagtacaaggacgtcttcaagggcgtcgacctggtc
tacgacgtcgagacgtcgaacgtgaaggagaatctgcgcctggagagtgcccctgaggcg
ggtaaggcgtcatggacgtgggaggtcgatgctcccggactcgctgccgcaaaggatgat
ctggggaacatcgtcttctcggatcagtccggtgccacagtcttcgctatgcccgctccg
attctctgggactcgtcgggtaccgagaagaaggccgatgcggacgctgaaggggccgtc
gccctcgtgcaggagggttcgaagaccctgctgacgatcagcgcgtcgcaggcgtggctg
cacgaccccaagcgcgtctatcccgtgtacgtggatcccacgacggagacgaccatcaag
gacgtcgcggctttcaagtcgaatgggcagaccaacagtggaatgacgcaggtcggtaac
accaattcgaatggagtctggcggtcgatcgcgcacttcaactacgagtcggtcgtcgca
ggcaagcaggtcgtgggcgcgaacatcggcgtgacgaacatcgtcgacgggacgaccgga
acctacgcagggggcgtccacgacgtcacctcgtatggcttcaacggcgctggtgtccag
ctcgcgtccctgtcgatctcggagcggggtggtgagacgggctgggacggcaggcttggg
tccaagctcgccgagtgggctcgcaacggtgtatccgggggcaatctgctcattggcggt
gatgagcgcggaggggtgtactcctaccgctggatcgacgtgcacctgtggctcgagacg
aaggacttcccgcgcgcggggtggaacccgcttccggccgacaagctggagaatcagacc
ctgaccccgacgcttcacgcggacgccgagtacgatcccaccacgagtggtctggatcat
ctctaccgcgtgagcaccaacccgaacccagaaatcagtcccatttacgacaccggctgg
ggagcgggagctgaccagaaaattcctgcgggctacctcaatccgaacacctggtactac
tggcatacctttgtgaaggacaatgccgatggctattacggtacgtctacggtcgcagtg
agtcagacctggagtttcaagaccaccgacccccctgttccccagcagagcacgacaagt
ccctcggacaagtcggtcatcgtgtccacgacgccgcgactgcaggtcggcgcgattggg
aacgcgaacctgaaggagtacgccttccggatcgccacgggcgccgacgcgacgaccgga
caggtcgcgacctccggctggcggaccgatccgtggtgggatgtgccgccctcgatcctg
caggacggctctacgtacacgtggaccgtgctgactcgagacaagtcgaacaacgagtgg
ggacccttctgggtcaaccgactgaccgtcaaccagcgcatcactaactccggtcctgcc
ccgaccgactccgccggccccgccacggtgaatcttgcgaacggcaatgtcagcatgggc
ttcagttccccgacggtcgcgaccatcggtggtgacatcggtatgagcttcacttacaac
tcgaagaagaccgtgaacaacggcctcaccggccggtactacaactacaccggcacagga
gtcccgccgtccgacttctccggcacgaacatcaagcagatcctccagcgcaccgactcc
cagctgaacttcgactggggaggaggctcgcccggtgacggcgtgaacagcgacaacttc
atggctcgctggagcggtttcctccgtgtccctgacgccggcccgtgggagttcgcgacc
agccgcgatgacggtgtcatcgtcacggtcggaaccgcgaacggcggcgccggaaccaag
gtggtcgaccggtgggacgcagctcatcaagatcccgtgtggggaggcgcaagcgccacc
atcactggtgcggtcccgatcgacgtaaagtacttcgagcaggcgaccgacgccagcctc
aagctctacatccgcaaggtcggaacgaccagcgcatcgctcatccccgccgactgggtc
acagcgacccggtctgtcctccccggcgggtggagcggctcgacacccctcgtcggagac
ctgcagacctacgcgaaggccgaggtgaaggaagggtccatcgtcttcaccgacatcgac
ggcgacacccacacctacacgaagaagtctgccggtggatactccgcacctgctggcgag
tccggcgtcgccgcgatcgacgccaacggagcagcctctcttgccgacggcgccggcgtc
gtcacggtcttcaacagagacggcgcggtctccgccgtgaccagccccgacgacaccaag
aagcccaccgcgcccgtcgtctcgtatcgggccgacggtctcgtggatcgcatctcggac
cggctctccggcagcaccagcggctccactaccacctatgcccgcagcgtccgcttcatc
tatcagggcgacactgccgccagcctcggcctcgacaccggcgagaactggcccggcact
cagaacctctgcccaacggattcgagctcgacttcggcctatgtggcggcgccgaccggg
atgctctgccgcatcctctacccgaaccacaccgcgaactcgttcatcaacgacaccgcg
ctgctctacgacgcctccggcaacctcgtccgcatcaacgaccccggcaacgaagtcact
accttcgtctacgacggcagcggacgcgtgaccgcagtgcgcgacagcctctccaacgac
tggatcaccaacgtctctcccggaagcagcgggctcgccaccactcgcacggagatctcg
tacgacagcgccgggcgccccgtaactgtcacgctccctgcacctgatggagtcacgcag
tcgacgcgcccgagcaagacctacaactggccagcagcgggaggtgacacgaccaccgtc
gatgtcgccggactcaccgtccccaactcgggcacatcgaacggccacgcggtcaccgtc
aagtacgactcggcctaccgaacgctcagttcgaaaacggcctccggcctggaaagcctc
accgaatggacgagtagcgaccttcagctgtcgtcgacaaacccgcaaggtctcaagtcg
accgtcttctacgactacgccaaccgtccgtacgacaattacggacccgcgccgaccgcc
tgcttcgccggcaataagcccacctccagctgctcgggcactgggcactccacgacgact
tacgacggtgacctcaacggactgtcggcgagttactacggcaacaaccaactctccggc
gtgcccgtcggttacggccttggtcaggaaagcaccggaaagattgccgtggattgggga
gccggagcgccggccggaatcagtagcgaccagttctccgcccgatacaccggcagcatc
accattcccaccgccggcgactggtatttcaaaaccatcgccgacgacggcacgcgcctc
tggatcgacaacgtcctcaagatcgacgattgggtttcgcagtcgcagcactggtcggtc
ccaggccgcatccacaccgacgccgacaacaccgtcctccccatccgcctcgactacctc
gacaacggtggagacgcacacctcgaactcaactggtcacagtccccgaacaccgacttc
acctgggttcccggcgcacagatgaaacctgactacggcctcaccacttcaacgaccacc
gatgacaaattctcggtttcaaataccatgagcgatggaaccagcgcaccgaacggcgtc
gctgcatcaacgtccgcggtgagctcgtcgacggtgtctacaaactacggaagcgagccg
tggctcgggctctccacctcaagcacggtcgacccagccgggcttgccctcagcaccaag
actgattacgagaccgacggctataaccgccgcaccgggaaaaccctccctgcggccacg
tcagccggagcaaccgccgccagcgccggaacgactttcgcctattacggcgataaggac
acttacggccccgctctcggtactacgtccgcggtctgcggtcttgcactgaccacccct
cagttcggcatgctgaagcagaccactaatgcgaaatatggtggatctgcaaattccgtc
agcactcagtacatatacgacatcatggggcgcgtcgtgggcgcaaagcagtcgggcgac
agcgcgtggacctgcactacctatgatgcccgcgggcgcaatgccgccgtcgcttacccg
aaaaccggaacgatcgctgctcgaacggttactacaagttacactagtgatgggacgtca
tcgggagacccgcgcacaacagcggtgacggactcgtcgatagccgcgtcaccaaccgct
gggaaggtcacgaccacgaccgaccttctcggccgagccgtcagctatgccgacgtttgg
ggtctaactacggcaaccacctacgatctcgtcggcaatgtcattcagacccaaactaag
aaaatatcgtccatcgtctccgtacaaactttcgagtatgaccttgatagtcgcgtcacg
agggtcaagcgcggtggtgccgaccttgccaccgtcacctacggacccgcagacgccgcc
tcactgctggaccgcggccaagtcaccgcggtgagctacccagcagctagtgccggaaac
ggtaccaatctaggtagtatcgttcggagcaatcggacgggagcacaagtgggccttacg
tggaatttcccggcaggaagaacctcgaatttgactgacactgtgttgcgttctcaatct
ggacgtattgttcaagatacgattacagatgcaggtaacctatctcaggcgaactacaac
ttcgacgcggcaggacgcctgattaaggcgataattccgaaccataatcttacttacgga
tacggtgactcgtcctgcaatacggccagctatccaggcgctattgtccgcgctggaaag
aacggaaaccgcacaagctacaccgacgtcgccacgctccccacagggacggcaacgacc
acaactgcgtactgctacgactccgccgatcggcttctgggctcgacaatttctagtggc
gtagctgcaactggtgcgaacgcggtggccgacggactgagtagctcggaggtcaagtac
gacgagggcggaaacactgtcacgctcggtgatgaagcaatgacctatgatgccgcagac
cgacacctttccaccgtcacacctactggcgcggctacctaccagcgcgatgccttcgat
cgaattgtgtcccgaaatcagaccatcgctggaaacagttccgaagttcgatacggattc
gaaggtgggtctgatacgccggacttcatactcgattcatcgaataatttgatggaagag
attgtttccctccccggtggagttgtcgctactattccagtgagcggatcagaaatatgg
gcataccccaacttgcacggtgacatcatcgtcacggccgacggtgcaggggtaagagcg
aaaaactctgcgggcgcgctgctgccggccgctctttacgatccttatggtcaggtcgtg
gatccaacgacaaagttgatcggcaccgtggctgcggatgactcgattccgaatacccag
tcccgtactgatgctgactacggctggcttgggcagcaccagaagttgtcggagcacatc
ggaagtatcagcacaattgaaatgggtgcgcgtcaatatgtggctgcaattggcagattc
ctcgaggtcgaccctgaagaaggcggggttcaaaacgactatgtatacccggtggacccg
atcaacatgttcgaccttgacgggcgcgccttcaattggggtctggcaattgatatcgga
ttgactgtgttgatgttcgttcccggactgggtgcagcagcggctgtggcgcgtgttgct
gtaatcgcggtgcgggtgtataaagcagcggcgatggtcgagaggggaggagcagcggcg
aatgctctaattcgcacaggagtgcgggccagtggattcctcgggcgcgttggttcaaga
gtcggtggccgggtttacaccggtgctactcgtcgatccgtttcaaataacggtcgtggt
tacaactacacttctcgagatggacttcgtcagtggcggtctccgcagttcaaaccgctt
ccacagcgtctcggtggtggctaccagtggacgtcgaataccggctactctcgtactggt
aatttgaatcccggtagcaataacttgcgtaacttgcacatctatcacggagggtcccga
tggaggccttga
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