Rathayibacter tanaceti: GSU10_02055
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Entry
GSU10_02055 CDS
T06377
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rte
Rathayibacter tanaceti
Pathway
rte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSU10_02055 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rte03019
]
GSU10_02055 (recQ)
03400 DNA repair and recombination proteins [BR:
rte03400
]
GSU10_02055 (recQ)
Enzymes [BR:
rte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSU10_02055 (recQ)
Messenger RNA biogenesis [BR:
rte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GSU10_02055 (recQ)
DNA repair and recombination proteins [BR:
rte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GSU10_02055 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QHC54559
UniProt:
A0AAE6V5J1
LinkDB
All DBs
Position
440189..442324
Genome browser
AA seq
711 aa
AA seq
DB search
MWSEAAGRVPRVTEPTATALPTAEQLAESPAEPGAAGSSEAQAILEKVFGYASFRGEQQA
IVEQVIGGGDAVVLMPTGGGKSLCYQIPAIVRPGTGVVVSPLIALMQDQVDALRANGVRA
EFLNSTQDAGERTRVERAYLDGELDLLYVAPERLGNEGTKQFLARGRIALFAIDEAHCVS
QWGHDFRPDYLALGELAERWPDVPRIALTATATEATHREITTRLHLGAARHFVSSFDRPN
IQYRIVNKVEPRKQLIDFLRREHAHDAGIVYALSRKSVEATAEALRAAGFDAVAYHAGLD
SRVRAAAQSRFLREEGVIVCATIAFGMGIDKPDVRFVAHIDLPKSVEGYYQETGRAGRDG
LPSTAWLAYGLQDVVQQRRMIDESPGDLAHRRRMSAHLDAMLALSETVQCRRVNLLAYFG
QESTACGKCDTCLEPPASWDGTVAAQKFLSTVVRLKRERNQQFGAGHIIDVLRGKTTPRT
TQHKHDALATWGIGADLSDTQWRGVARQLLAQGLLGVNDDGFGTLVITPASGSVLSGERK
VELRQEPERPARSSGPSRSGRSAVSDLPAEAQPLFERLREWRAAQARAQSVPAYIVFNDA
TLREIATAEPATIDALSIIGGVGQKKLVTYGAAVLAVVAGETPEIAEAEQAEPAPRRAAR
SGTARSAAAGSTRPAFGSGSSERTGPPVSSAPDDDWVPPEEPDWEPGWDSY
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
gtgtggtcggaggcggcgggtagagttccgcgggtgacagagcccaccgcgacagccctt
cccaccgccgagcagctcgccgagtccccggccgagcccggtgcagcaggctcgagcgag
gcgcaggcgatcctcgagaaggtcttcggctatgcgtcgttccgcggcgagcagcaggcc
atcgtcgagcaggtcatcggaggcggcgacgccgtcgtcctgatgcccaccggaggcggc
aagtcgctctgctaccagatcccggcgatcgtgcgccccggcaccggcgtggtggtctcc
ccgctcatcgccctcatgcaagaccaggtcgacgccctccgcgcgaacggcgtgcgcgcc
gagttcctcaactccacgcaggatgcgggcgagcgcacccgcgtcgagcgcgcctacctc
gacggcgaactcgacctcctctacgtcgcccccgagcgcctcggcaacgagggcaccaag
cagttcctcgcccggggtcgcatcgccctcttcgcgatcgacgaggcgcactgcgtcagc
cagtggggccacgacttccgccccgactacctcgccctcggcgagctcgccgagcgctgg
cccgacgtcccgcgcatcgccctcaccgccaccgccaccgaggcgacccaccgcgagatc
accacccgtctgcacctgggtgccgcccgccacttcgtctcgagcttcgaccgccccaac
atccagtaccgcatcgtcaacaaggtggagccgcgcaagcagctgatcgacttcctccgc
cgcgagcatgcgcacgacgcgggcatcgtctacgccctctcgcgcaagagcgtggaggcg
acggccgaggccctgcgcgcggccggcttcgacgcggtcgcgtaccacgcgggcctcgac
tcccgggtcagggccgctgcccagtcgcgcttcctccgcgaggagggcgtcatcgtctgc
gcgaccatcgccttcggcatgggcatcgacaagccggacgtccggttcgtcgcgcacatc
gacctccccaagtcggtcgagggctactaccaggagacgggccgcgccggccgtgacggg
ctcccctccaccgcctggctcgcctacgggttgcaggacgtcgtgcagcagcgccgcatg
atcgacgagtcgccgggcgatctcgcgcaccgccggcggatgtccgcgcacctcgacgcg
atgctcgccctctccgagacggtgcagtgccgccgcgtcaacctgctcgcctacttcggc
caagagagcaccgcgtgcggcaaatgcgacacctgcctcgagccgccggcctcgtgggac
ggcacggtcgcggcacagaagttcctctcgacggtcgtgcgcctcaagcgcgagcgcaac
cagcagttcggcgccggtcacatcatcgacgtcctccgcggcaagaccactccgcgcacc
acccagcacaagcacgatgcactcgccacgtggggcatcggggccgatctcagcgacacc
cagtggcgcggagtcgcgcggcagctcctcgcccagggcctcctgggcgtcaacgacgac
ggcttcggcaccctggtcatcacgcccgcgtccggctccgtcctgagcggcgagcggaag
gtcgagctgcgtcaggagccggagcgtcccgcgcgctcgagcggcccgtcccgctccggt
cgctccgccgtgtccgacctgcccgccgaggcgcagccgctgttcgagcgcctccgcgaa
tggcgtgcggcacaggcgcgcgcgcagtcggtgcccgcgtacatcgtcttcaacgacgcc
actctccgcgagatcgcgaccgccgagccggccacgatcgatgcgctcagcatcatcggc
ggcgtcggccagaagaagctcgtgacctacggagccgcggtgctcgccgtcgtcgccggc
gagactcccgagatcgccgaggcggagcaggcggagcccgctcctcggcgcgcggcccgc
tccggcaccgctcgctcggcagcggccgggtcgaccaggcccgcgttcggcagcggttcg
tccgagcgcaccggcccgccggtctcctccgccccggacgacgactgggtgccgccggag
gagcccgactgggagcccggctgggacagctactga
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