Rathayibacter tanaceti: GSU10_02580
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Entry
GSU10_02580 CDS
T06377
Name
(GenBank) 3-methyladenine DNA glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rte
Rathayibacter tanaceti
Pathway
rte03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GSU10_02580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rte03000
]
GSU10_02580
03400 DNA repair and recombination proteins [BR:
rte03400
]
GSU10_02580
Enzymes [BR:
rte01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GSU10_02580
Transcription factors [BR:
rte03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GSU10_02580
DNA repair and recombination proteins [BR:
rte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GSU10_02580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
RecR_HhH
OGG_N
Motif
Other DBs
NCBI-ProteinID:
QHC54646
UniProt:
A0A166H1R9
LinkDB
All DBs
Position
550448..551233
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AA seq
261 aa
AA seq
DB search
MRNHALPGVERVGDDGRSLERLLTVAGALHPVALAITETGVRFEAETVVIEPAAAIVRAW
FDLDSDVVAIGRQLSRDPLLARSVAERPGLRATQYPEAFEAAVMAVLGQQVSVAAARTFG
ARTVAAFGTRGARGLLAFPTPAALLAPELEELRSAIGVTSARARTVRALARAVADGLVLD
GAGDLREQRRLLLALPGIGPWTADYLALRLLGDPDAFPAGDLVLRRALGRVSTAEAEAAS
QAWRPHRAHAAFHLWASTGAV
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaaccacgccctccccggagtggagcgtgtcggtgacgacggccggagcctggag
cgcctgctcacggtcgcgggtgccctgcacccagtggcgctcgccatcaccgagacgggc
gtccggttcgaggcggagaccgtcgtgatcgagcccgcggcggcgatcgtccgcgcctgg
ttcgacctcgactctgacgtggtcgcgatcggccggcagctctcgcgcgacccgctgctc
gcgcgctcggtcgccgagcggcccgggctccgtgcgacgcagtacccggaggcgttcgaa
gccgccgtgatggcggtcctcgggcagcaggtctccgtcgctgcggcacgcaccttcggt
gctcggacggttgccgcgttcggcacccgcggcgcgcgcggactgctggccttcccgact
cctgcggccctgctcgcgccggaactcgaggagctgcgctcggccatcggcgtcaccagc
gcccgagctcggacggtgcgtgccctcgcccgtgccgtcgccgacgggctcgtgctcgac
ggcgcaggcgatctgcgcgagcagcggcgcctcctcctcgccctccccgggatcggaccg
tggacggccgactacctcgccctgcggctgctcggcgatccggacgccttcccggccggc
gacctggtgctgcgcagggcgctcggccgtgtgagcaccgcggaggcggaggcagcctcg
caggcctggcgtccgcaccgggcgcatgcggcgttccacctctgggcgagcaccggagcg
gtctga
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